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Search of human proteins with 145864459
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens]
(488 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens] 1003 0.0
gi|4507147 acyl-CoA:cholesterol acyltransferase 2 [Homo sapiens] 134 2e-31
gi|49533617 sterol O-acyltransferase 1 [Homo sapiens] 123 3e-28
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.005
gi|4505531 oxysterol binding protein [Homo sapiens] 36 0.069
gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens] 36 0.090
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens] 35 0.15
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ... 35 0.15
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens] 35 0.15
gi|126090909 engrailed homeobox 1 [Homo sapiens] 35 0.20
gi|4507741 twist [Homo sapiens] 35 0.20
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 34 0.26
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 33 0.45
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 33 0.45
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ... 33 0.59
gi|27804315 homeobox C12 [Homo sapiens] 33 0.59
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 33 0.76
gi|23510335 inositol hexakisphosphate kinase 1 isoform 1 [Homo s... 32 1.00
gi|17738287 secretory carrier membrane protein 4 [Homo sapiens] 32 1.3
gi|110224458 solute carrier family 12, member 6 isoform e [Homo ... 32 1.7
gi|110224456 solute carrier family 12, member 6 isoform d [Homo ... 32 1.7
gi|110224454 solute carrier family 12, member 6 isoform c [Homo ... 32 1.7
gi|110224452 solute carrier family 12, member 6 isoform c [Homo ... 32 1.7
gi|4826780 solute carrier family 12, member 6 isoform b [Homo sa... 32 1.7
gi|110224449 solute carrier family 12, member 6 isoform a [Homo ... 32 1.7
gi|239749044 PREDICTED: hypothetical protein XP_002346891 [Homo ... 31 2.2
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 31 2.2
gi|62422571 collapsin response mediator protein 1 isoform 1 [Hom... 31 2.2
gi|186928831 dermokine isoform 6 [Homo sapiens] 31 2.9
gi|188536100 cryptochrome 2 (photolyase-like) isoform 1 [Homo sa... 30 3.8
>gi|145864459 diacylglycerol O-acyltransferase 1 [Homo sapiens]
Length = 488
Score = 1003 bits (2593), Expect = 0.0
Identities = 488/488 (100%), Positives = 488/488 (100%)
Query: 1 MGDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVG 60
MGDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVG
Sbjct: 1 MGDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVG 60
Query: 61 SGHWELRCHRLQDSLFSSDSGFSNYRGILNWCVVMLILSNARLFLENLIKYGILVDPIQV 120
SGHWELRCHRLQDSLFSSDSGFSNYRGILNWCVVMLILSNARLFLENLIKYGILVDPIQV
Sbjct: 61 SGHWELRCHRLQDSLFSSDSGFSNYRGILNWCVVMLILSNARLFLENLIKYGILVDPIQV 120
Query: 121 VSLFLKDPYSWPAPCLVIAANVFAVAAFQVEKRLAVGALTEQAGLLLHVANLATILCFPA 180
VSLFLKDPYSWPAPCLVIAANVFAVAAFQVEKRLAVGALTEQAGLLLHVANLATILCFPA
Sbjct: 121 VSLFLKDPYSWPAPCLVIAANVFAVAAFQVEKRLAVGALTEQAGLLLHVANLATILCFPA 180
Query: 181 AVVLLVESITPVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHT 240
AVVLLVESITPVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHT
Sbjct: 181 AVVLLVESITPVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHT 240
Query: 241 VSYPDNLTYRDLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEMLFFTQLQVGLIQQWM 300
VSYPDNLTYRDLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEMLFFTQLQVGLIQQWM
Sbjct: 241 VSYPDNLTYRDLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEMLFFTQLQVGLIQQWM 300
Query: 301 VPTIQNSMKPFKDMDYSRIIERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREF 360
VPTIQNSMKPFKDMDYSRIIERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREF
Sbjct: 301 VPTIQNSMKPFKDMDYSRIIERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREF 360
Query: 361 YRDWWNSESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKWMARTGVFLASAFFHEYLVS 420
YRDWWNSESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKWMARTGVFLASAFFHEYLVS
Sbjct: 361 YRDWWNSESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKWMARTGVFLASAFFHEYLVS 420
Query: 421 VPLRMFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSLIIGQPIAVLMYVHDYYVLN 480
VPLRMFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSLIIGQPIAVLMYVHDYYVLN
Sbjct: 421 VPLRMFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSLIIGQPIAVLMYVHDYYVLN 480
Query: 481 YEAPAAEA 488
YEAPAAEA
Sbjct: 481 YEAPAAEA 488
>gi|4507147 acyl-CoA:cholesterol acyltransferase 2 [Homo sapiens]
Length = 522
Score = 134 bits (337), Expect = 2e-31
Identities = 96/342 (28%), Positives = 151/342 (44%), Gaps = 32/342 (9%)
Query: 145 VAAFQVEKRLAVGALTEQAGL-LLHVANLATILCFPAAVVLLVESITPVGSLLALMAHTI 203
+A +Q + A G T+ GL +A A +LC V + + P + +
Sbjct: 179 LAPYQALRLWARGTWTQATGLGCALLAAHAVVLCALPVHVAVEHQLPPASRCVLVFEQVR 238
Query: 204 LFLKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHTVSYPDNLTYRDLYYFLFAPTLCY 263
+K +S+ R ++ AP SY YFLF PTL Y
Sbjct: 239 FLMKSYSFL-------REAVPGTLRARRGEGIQAPSFSSY---------LYFLFCPTLIY 282
Query: 264 ELNFPRSPRIRKRFLLRRILEMLFFTQLQVGLIQQWMVPTIQN-SMKPFKDMDYSRIIER 322
+PR+P +R ++ + + L ++ + VP N S +PF ++
Sbjct: 283 RETYPRTPYVRWNYVAKNFAQALGCVLYACFILGRLCVPVFANMSREPFSTR---ALVLS 339
Query: 323 LLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREFYRDWWNSESVTYFWQNWNIPVH 382
+L +P + L+ F+ H LNA AE+++FGDR FYRDWWNS S + +++ WN+ VH
Sbjct: 340 ILHATLPGIFMLLLIFFAFLHCWLNAFAEMLRFGDRMFYRDWWNSTSFSNYYRTWNVVVH 399
Query: 383 KWCIRHFYKPMLR--RGSSKWMARTGVFLASAFFHEYLVSVPLRMFR-----LWAFTGMM 435
W + Y+ LR ++ +A GVFL SA HEY+ L F L+ G M
Sbjct: 400 DWLYSYVYQDGLRLLGARARGVAMLGVFLVSAVAHEYIFCFVLGFFYPVMLILFLVIGGM 459
Query: 436 AQIPLAWFVGRFFQGNYGNAAVWLSLIIGQPIAVLMYVHDYY 477
L + + G N +W L +GQ I V +Y ++Y
Sbjct: 460 ----LNFMMHDQRTGPAWNVLMWTMLFLGQGIQVSLYCQEWY 497
>gi|49533617 sterol O-acyltransferase 1 [Homo sapiens]
Length = 550
Score = 123 bits (309), Expect = 3e-28
Identities = 91/316 (28%), Positives = 146/316 (46%), Gaps = 39/316 (12%)
Query: 175 ILCFPAAVVLLVESITPVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASS 234
+L F V+L ++ P + I+F ++ +S+ R + ++ K+ SS
Sbjct: 234 VLGFGPTYVVLAYTLPPASRFI------IIFEQIRFVMKAHSFVRENVPRVLNSAKEKSS 287
Query: 235 AAAPHTVSYPDNLTYRDLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEMLFFTQLQVG 294
TV P T YFLFAPTL Y ++PR+P +R ++ + ++
Sbjct: 288 -----TVPIP---TVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYY 339
Query: 295 LIQQWMVPTIQN-SMKPFKDMDYSRIIERLLKLAV-----PNHLIWLIFFYWLFHSCLNA 348
+ ++ P +N +PF R+L L V P LI + F+ H LNA
Sbjct: 340 IFERLCAPLFRNIKQEPFS--------ARVLVLCVFNSILPGVLILFLTFFAFLHCWLNA 391
Query: 349 VAELMQFGDREFYRDWWNSESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKW--MARTG 406
AE+++FGDR FY+DWWNS S + +++ WN+ VH W + YK L S ++ A
Sbjct: 392 FAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLA 451
Query: 407 VFLASAFFHEYLVSVPLR-----MFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSL 461
VF SA HEY ++V L +F L+ F GM + V + N +W SL
Sbjct: 452 VFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGM----AFNFIVNDSRKKPIWNVLMWTSL 507
Query: 462 IIGQPIAVLMYVHDYY 477
+G + + Y ++Y
Sbjct: 508 FLGNGVLLCFYSQEWY 523
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 12 TGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGV 59
T +RP H G P AA V AA + G+AG APAPAP G AGV
Sbjct: 279 TLARPPGHPAGPPTAAPA-VPPPAAAQNGGSAGAAPAPAPAAGGPAGV 325
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 36.2 bits (82), Expect = 0.069
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 20 GGGGPAAAEEEVRDAAAGPDVGAAGDA---PAPAPNKDGDAGVGSG 62
G G AA+ V AA GP GA G A PAPAP G G G+G
Sbjct: 40 GPGSGAASGTVVAAAAGGPGPGAGGVAAAGPAPAPPTGGSGGSGAG 85
>gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens]
Length = 227
Score = 35.8 bits (81), Expect = 0.090
Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 3 DRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAP 49
+R S RRRR+G GGGG A A E VR AAG G P P
Sbjct: 19 ERRSKRRRRSGG---DGGGGGGARAPEGVRAPAAGQPRATKGAPPPP 62
>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 228
Score = 35.0 bits (79), Expect = 0.15
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 12/69 (17%)
Query: 8 RRRRTGSRPSSHGGGGPAAAEEEVRDAA----AGPDVGAAGDAPAPAPNK--------DG 55
R R + SRPSS GP E AA A P + D P P + G
Sbjct: 26 RMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGG 85
Query: 56 DAGVGSGHW 64
G G+ HW
Sbjct: 86 GGGCGAQHW 94
>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
sapiens]
Length = 231
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 15/72 (20%)
Query: 8 RRRRTGSRPSSHGGGGPAAAEEEVRDAA----AGPDVGAAGDAP-----------APAPN 52
R R + SRPSS GP E AA A P + D P AP +
Sbjct: 26 RMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGS 85
Query: 53 KDGDAGVGSGHW 64
G G G+ HW
Sbjct: 86 GGGGGGCGAQHW 97
>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 15/72 (20%)
Query: 8 RRRRTGSRPSSHGGGGPAAAEEEVRDAA----AGPDVGAAGDAP-----------APAPN 52
R R + SRPSS GP E AA A P + D P AP +
Sbjct: 26 RMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGS 85
Query: 53 KDGDAGVGSGHW 64
G G G+ HW
Sbjct: 86 GGGGGGCGAQHW 97
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 34.7 bits (78), Expect = 0.20
Identities = 19/50 (38%), Positives = 23/50 (46%)
Query: 13 GSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGSG 62
GS+P++ G G A AAA V AA A A P+ G G G G
Sbjct: 182 GSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGSGGG 231
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 34.7 bits (78), Expect = 0.20
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 2 GDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGS 61
G RG +RR SR S+ GG GP AAG VG + +PA K G G
Sbjct: 32 GKRGGRKRR--SSRRSAGGGAGPG--------GAAGGGVGGGDEPGSPAQGKRGKKSAGC 81
Query: 62 G 62
G
Sbjct: 82 G 82
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 34.3 bits (77), Expect = 0.26
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 18 SHGGG---GPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGSGHWELRCHRLQDS 74
S G G G AAA DAAAGP G AG + A G AG G H + + S
Sbjct: 52 SRGSGLQAGAAAAASLEHDAAAGPACGGAGG--SAAGGLGGGAGGGGDHAD------KLS 103
Query: 75 LFS-SDSGFSNY 85
L+S +DSG+ +Y
Sbjct: 104 LYSETDSGYGSY 115
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 33.5 bits (75), Expect = 0.45
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 2 GDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAG-DAPAPAPNKDGDAGVG 60
G G S +G+ S G G ++ +++G G+ G + P K G+ G
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARG 339
Query: 61 SGHWELRCHRLQDSLFSSDSGFSNYR---GILNW 91
SG ++ +F+ D+ + N++ G +NW
Sbjct: 340 SGESGIQNSETSPGMFNFDTFWKNFKSKLGFINW 373
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 33.5 bits (75), Expect = 0.45
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 2 GDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAG-DAPAPAPNKDGDAGVG 60
G G S +G+ S G G ++ +++G G+ G + P K G+ G
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARG 339
Query: 61 SGHWELRCHRLQDSLFSSDSGFSNYR---GILNW 91
SG ++ +F+ D+ + N++ G +NW
Sbjct: 340 SGESGIQNSETSPGMFNFDTFWKNFKSKLGFINW 373
>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
Length = 193
Score = 33.1 bits (74), Expect = 0.59
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 2 GDRGSSRR--RRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGV 59
G+RG RR RR RP+ G P AA R A P +GA P+ A
Sbjct: 121 GNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPP 180
Query: 60 GSG 62
G G
Sbjct: 181 GGG 183
>gi|27804315 homeobox C12 [Homo sapiens]
Length = 282
Score = 33.1 bits (74), Expect = 0.59
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 13/76 (17%)
Query: 16 PSSHGGGGPAAAEEEVRDAAAGPD-------------VGAAGDAPAPAPNKDGDAGVGSG 62
P + GGGG EE RD AGP +G D A DG G G
Sbjct: 98 PCAEGGGGGLKREERGRDPGAGPGAALLPLEPSGPPALGFKYDYAAGGGGGDGGGGAGPP 157
Query: 63 HWELRCHRLQDSLFSS 78
H C L+ SS
Sbjct: 158 HDPPSCQSLESDSSSS 173
>gi|165905613 ring finger and KH domain containing 1 [Homo
sapiens]
Length = 651
Score = 32.7 bits (73), Expect = 0.76
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 6 SSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGD 56
SS + G GGGG AA E+ A P GA APAP P + D
Sbjct: 3 SSLGQPDGGGGGGGGGGGVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPD 53
>gi|23510335 inositol hexakisphosphate kinase 1 isoform 1 [Homo
sapiens]
Length = 441
Score = 32.3 bits (72), Expect = 1.00
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 15/86 (17%)
Query: 10 RRTGSRPSSHGGGGPAAAEEEVRDA----------AAGPDVGAAGDAPAPAPNKDGDAGV 59
RR SR S H G + +EE A P V + P DG++G+
Sbjct: 114 RRKHSRRSLHRSGSGSDHKEEKASLSLETSESSQEAKSPKVELHSHSEVPFQMLDGNSGL 173
Query: 60 GS-----GHWELRCHRLQDSLFSSDS 80
S W LRCH+ Q S S+S
Sbjct: 174 SSEKISHNPWSLRCHKQQLSRMRSES 199
>gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]
Length = 229
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 415 HEYLVSVPLRMFRLWAF----TGMMAQIPLAWFVGRFFQGNYGNAAVWLSL 461
H+ LV R++RLW F G+ LAW++G N+G A VWL L
Sbjct: 33 HQVLVK---RIYRLWMFYCATLGVNLIACLAWWIGGGSGTNFGLAFVWLLL 80
>gi|110224458 solute carrier family 12, member 6 isoform e [Homo
sapiens]
Length = 1135
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 94 VMLILSNARLFLENLIKYGILVDPIQVVSLF--------LKDPYSWPAPCLVIAANVFAV 145
++ IL+ + ++L N++ +G ++ + + F + SWP+P +++ + F+
Sbjct: 506 ILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFST 565
Query: 146 AAFQVEK-----RLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLA--- 197
++ RL + L V + P +LL +I +G L+A
Sbjct: 566 CGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLD 625
Query: 198 LMAHTILFLKLFSYRDVNSWC 218
L+A + L Y VN C
Sbjct: 626 LVAPILSMFFLMCYLFVNLAC 646
>gi|110224456 solute carrier family 12, member 6 isoform d [Homo
sapiens]
Length = 1141
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 94 VMLILSNARLFLENLIKYGILVDPIQVVSLF--------LKDPYSWPAPCLVIAANVFAV 145
++ IL+ + ++L N++ +G ++ + + F + SWP+P +++ + F+
Sbjct: 512 ILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFST 571
Query: 146 AAFQVEK-----RLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLA--- 197
++ RL + L V + P +LL +I +G L+A
Sbjct: 572 CGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLD 631
Query: 198 LMAHTILFLKLFSYRDVNSWC 218
L+A + L Y VN C
Sbjct: 632 LVAPILSMFFLMCYLFVNLAC 652
>gi|110224454 solute carrier family 12, member 6 isoform c [Homo
sapiens]
Length = 1091
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 94 VMLILSNARLFLENLIKYGILVDPIQVVSLF--------LKDPYSWPAPCLVIAANVFAV 145
++ IL+ + ++L N++ +G ++ + + F + SWP+P +++ + F+
Sbjct: 462 ILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFST 521
Query: 146 AAFQVEK-----RLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLA--- 197
++ RL + L V + P +LL +I +G L+A
Sbjct: 522 CGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLD 581
Query: 198 LMAHTILFLKLFSYRDVNSWC 218
L+A + L Y VN C
Sbjct: 582 LVAPILSMFFLMCYLFVNLAC 602
>gi|110224452 solute carrier family 12, member 6 isoform c [Homo
sapiens]
Length = 1091
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 94 VMLILSNARLFLENLIKYGILVDPIQVVSLF--------LKDPYSWPAPCLVIAANVFAV 145
++ IL+ + ++L N++ +G ++ + + F + SWP+P +++ + F+
Sbjct: 462 ILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFST 521
Query: 146 AAFQVEK-----RLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLA--- 197
++ RL + L V + P +LL +I +G L+A
Sbjct: 522 CGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLD 581
Query: 198 LMAHTILFLKLFSYRDVNSWC 218
L+A + L Y VN C
Sbjct: 582 LVAPILSMFFLMCYLFVNLAC 602
>gi|4826780 solute carrier family 12, member 6 isoform b [Homo
sapiens]
Length = 1099
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 94 VMLILSNARLFLENLIKYGILVDPIQVVSLF--------LKDPYSWPAPCLVIAANVFAV 145
++ IL+ + ++L N++ +G ++ + + F + SWP+P +++ + F+
Sbjct: 470 ILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFST 529
Query: 146 AAFQVEK-----RLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLA--- 197
++ RL + L V + P +LL +I +G L+A
Sbjct: 530 CGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLD 589
Query: 198 LMAHTILFLKLFSYRDVNSWC 218
L+A + L Y VN C
Sbjct: 590 LVAPILSMFFLMCYLFVNLAC 610
>gi|110224449 solute carrier family 12, member 6 isoform a [Homo
sapiens]
Length = 1150
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 94 VMLILSNARLFLENLIKYGILVDPIQVVSLF--------LKDPYSWPAPCLVIAANVFAV 145
++ IL+ + ++L N++ +G ++ + + F + SWP+P +++ + F+
Sbjct: 521 ILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPSPWVIVIGSFFST 580
Query: 146 AAFQVEK-----RLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLA--- 197
++ RL + L V + P +LL +I +G L+A
Sbjct: 581 CGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTAAIAELGILIASLD 640
Query: 198 LMAHTILFLKLFSYRDVNSWC 218
L+A + L Y VN C
Sbjct: 641 LVAPILSMFFLMCYLFVNLAC 661
>gi|239749044 PREDICTED: hypothetical protein XP_002346891 [Homo
sapiens]
Length = 114
Score = 31.2 bits (69), Expect = 2.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 8 RRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKD 54
R R + SRPSS GP E AA AG APA A + D
Sbjct: 26 RMRNSNSRPSSRASAGPGLCRTEAAAAAT-----RAGAAPATAESPD 67
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 31.2 bits (69), Expect = 2.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 2 GDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDA-----AAGPDVGAAGDAPAPA-PNKDG 55
GD GS R+ S+ G GP A+EE R GP+ G +P P+ P K G
Sbjct: 1808 GDGGSERKELPTSQK---GDDGPDIADEESRGLEGKADTPGPEDGGVKASPVPSDPEKPG 1864
Query: 56 DAGVG 60
G G
Sbjct: 1865 TPGEG 1869
>gi|62422571 collapsin response mediator protein 1 isoform 1 [Homo
sapiens]
Length = 686
Score = 31.2 bits (69), Expect = 2.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 1 MGDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAA--AGPDVGAAGDAPAPAP 51
+G RGS+R R+ RP + G GP +E+ D + +G V + G+ P
Sbjct: 55 VGRRGSARTPRSAGRPDAVGLPGPGGSEDTASDVSEPSGSAVSSPGERDERPP 107
>gi|186928831 dermokine isoform 6 [Homo sapiens]
Length = 189
Score = 30.8 bits (68), Expect = 2.9
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 26/93 (27%)
Query: 2 GDRGSSRRRRTGSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGS 61
G GSS TGS +HGG G G+ P K G+ GS
Sbjct: 17 GLEGSS----TGSSSGNHGGSG-------------------GGNGHKPGCEKPGNEARGS 53
Query: 62 GHWELRCHRLQDSLFSSDSGFSNYR---GILNW 91
G ++ +F+ D+ + N++ G +NW
Sbjct: 54 GESGIQNSETSPGMFNFDTFWKNFKSKLGFINW 86
>gi|188536100 cryptochrome 2 (photolyase-like) isoform 1 [Homo
sapiens]
Length = 614
Score = 30.4 bits (67), Expect = 3.8
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 13 GSRPSSHGGGGPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGSGHWELRCHRLQ 72
G + GG G A A V A AA APAPAP D + V HW + RL
Sbjct: 3 GVHVAYRGGAGVAGAVWTVMAATVAT---AAAVAPAPAPGTDSASSV---HWFRKGLRLH 56
Query: 73 DS 74
D+
Sbjct: 57 DN 58
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,638,445
Number of Sequences: 37866
Number of extensions: 848887
Number of successful extensions: 4734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 4620
Number of HSP's gapped (non-prelim): 150
length of query: 488
length of database: 18,247,518
effective HSP length: 106
effective length of query: 382
effective length of database: 14,233,722
effective search space: 5437281804
effective search space used: 5437281804
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.