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Search of human proteins with 145587088
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145587088 hypothetical protein LOC165186 [Homo sapiens]
(1019 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145587088 hypothetical protein LOC165186 [Homo sapiens] 1998 0.0
gi|93102424 hypothetical protein LOC23116 [Homo sapiens] 332 1e-90
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 49 3e-05
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 43 0.001
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 43 0.001
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 43 0.001
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 43 0.001
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 43 0.001
gi|155029552 hypothetical protein LOC388115 [Homo sapiens] 43 0.002
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 42 0.002
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 42 0.002
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 42 0.002
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 42 0.002
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 41 0.005
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 41 0.007
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 41 0.007
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 41 0.007
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 41 0.007
gi|91208420 bassoon protein [Homo sapiens] 40 0.009
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 40 0.009
gi|24308227 zinc finger protein 687 [Homo sapiens] 40 0.009
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 40 0.011
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 40 0.015
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 40 0.015
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 40 0.015
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 40 0.015
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 40 0.015
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 40 0.015
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 40 0.015
gi|153792074 proline rich 12 [Homo sapiens] 40 0.015
>gi|145587088 hypothetical protein LOC165186 [Homo sapiens]
Length = 1019
Score = 1998 bits (5175), Expect = 0.0
Identities = 1019/1019 (100%), Positives = 1019/1019 (100%)
Query: 1 MGTRDDVPEAKVLVPVAVYCGSIPRTSAGPRVLPPGSINSSLPHGEGSLQPEPRALLNNE 60
MGTRDDVPEAKVLVPVAVYCGSIPRTSAGPRVLPPGSINSSLPHGEGSLQPEPRALLNNE
Sbjct: 1 MGTRDDVPEAKVLVPVAVYCGSIPRTSAGPRVLPPGSINSSLPHGEGSLQPEPRALLNNE 60
Query: 61 EPSQLLRGLGQLGGLKLDTPSKGWQARNGHPRNLRALSLGDQPLVLLPSPESEANSVARD 120
EPSQLLRGLGQLGGLKLDTPSKGWQARNGHPRNLRALSLGDQPLVLLPSPESEANSVARD
Sbjct: 61 EPSQLLRGLGQLGGLKLDTPSKGWQARNGHPRNLRALSLGDQPLVLLPSPESEANSVARD 120
Query: 121 TIQIKDKLKKRRLSEGLAASSRASLDPGGGPQGVPLHSTIPRATSQRLLRVPRPMPLIQS 180
TIQIKDKLKKRRLSEGLAASSRASLDPGGGPQGVPLHSTIPRATSQRLLRVPRPMPLIQS
Sbjct: 121 TIQIKDKLKKRRLSEGLAASSRASLDPGGGPQGVPLHSTIPRATSQRLLRVPRPMPLIQS 180
Query: 181 IPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPI 240
IPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPI
Sbjct: 181 IPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPI 240
Query: 241 PKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGPREKTPASLEPKPLASP 300
PKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGPREKTPASLEPKPLASP
Sbjct: 241 PKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGPREKTPASLEPKPLASP 300
Query: 301 IRDRPAAAKKPALPFSQSAPTLTAFSFDCAREACPPLKEEDQKEIGTKIQVTISKSAREK 360
IRDRPAAAKKPALPFSQSAPTLTAFSFDCAREACPPLKEEDQKEIGTKIQVTISKSAREK
Sbjct: 301 IRDRPAAAKKPALPFSQSAPTLTAFSFDCAREACPPLKEEDQKEIGTKIQVTISKSAREK 360
Query: 361 MQLKQMKEMELLRRLEEPRTGQELTSQCLGSQRAFMKEGLLPLRGSGTLSVPTRLSGPCR 420
MQLKQMKEMELLRRLEEPRTGQELTSQCLGSQRAFMKEGLLPLRGSGTLSVPTRLSGPCR
Sbjct: 361 MQLKQMKEMELLRRLEEPRTGQELTSQCLGSQRAFMKEGLLPLRGSGTLSVPTRLSGPCR 420
Query: 421 NDVSIILRKWASRASLPSIPISRQEPRFARHASANSLPAVLTLGSPEWEEEEEMDLRACK 480
NDVSIILRKWASRASLPSIPISRQEPRFARHASANSLPAVLTLGSPEWEEEEEMDLRACK
Sbjct: 421 NDVSIILRKWASRASLPSIPISRQEPRFARHASANSLPAVLTLGSPEWEEEEEMDLRACK 480
Query: 481 ELRPFSNPELGLRDALQCLNSSDWQMKEKGLVSIQRLAACHSEVLTGKLHDVCLVVTGEV 540
ELRPFSNPELGLRDALQCLNSSDWQMKEKGLVSIQRLAACHSEVLTGKLHDVCLVVTGEV
Sbjct: 481 ELRPFSNPELGLRDALQCLNSSDWQMKEKGLVSIQRLAACHSEVLTGKLHDVCLVVTGEV 540
Query: 541 TNLRSKVSHLAISTLGDLFQALKKNMDQEAEEIARCLLQKMADTNEFIQRAAGQSLRAMV 600
TNLRSKVSHLAISTLGDLFQALKKNMDQEAEEIARCLLQKMADTNEFIQRAAGQSLRAMV
Sbjct: 541 TNLRSKVSHLAISTLGDLFQALKKNMDQEAEEIARCLLQKMADTNEFIQRAAGQSLRAMV 600
Query: 601 ENVTLARSLVVLTSAGVYHRNPLIRKYAAEHLSAVLEQIGAEKLLSGTRDSTDMLVHNLV 660
ENVTLARSLVVLTSAGVYHRNPLIRKYAAEHLSAVLEQIGAEKLLSGTRDSTDMLVHNLV
Sbjct: 601 ENVTLARSLVVLTSAGVYHRNPLIRKYAAEHLSAVLEQIGAEKLLSGTRDSTDMLVHNLV 660
Query: 661 RLAQDSNQDTRFYGRKMVNILMANTKFDAFLKQSLPSYDLQKVMAAIKQQGIEDNDELPS 720
RLAQDSNQDTRFYGRKMVNILMANTKFDAFLKQSLPSYDLQKVMAAIKQQGIEDNDELPS
Sbjct: 661 RLAQDSNQDTRFYGRKMVNILMANTKFDAFLKQSLPSYDLQKVMAAIKQQGIEDNDELPS 720
Query: 721 AKGRKVLRSLVVCENGLPIKEGLSCNGPRLVGLRSTLQGRGEMVEQLRELTRLLEAKDFR 780
AKGRKVLRSLVVCENGLPIKEGLSCNGPRLVGLRSTLQGRGEMVEQLRELTRLLEAKDFR
Sbjct: 721 AKGRKVLRSLVVCENGLPIKEGLSCNGPRLVGLRSTLQGRGEMVEQLRELTRLLEAKDFR 780
Query: 781 SRMEGVGQLLELCKAKTELVTAHLVQVFDAFTPRLQDSNKKVNQWALESFAKMIPLLRES 840
SRMEGVGQLLELCKAKTELVTAHLVQVFDAFTPRLQDSNKKVNQWALESFAKMIPLLRES
Sbjct: 781 SRMEGVGQLLELCKAKTELVTAHLVQVFDAFTPRLQDSNKKVNQWALESFAKMIPLLRES 840
Query: 841 LHPMLLSIIITVADNLNSKNSGIYAAAVAVLDAMVESLDNLCLLPALAGRVRFLSGRAVL 900
LHPMLLSIIITVADNLNSKNSGIYAAAVAVLDAMVESLDNLCLLPALAGRVRFLSGRAVL
Sbjct: 841 LHPMLLSIIITVADNLNSKNSGIYAAAVAVLDAMVESLDNLCLLPALAGRVRFLSGRAVL 900
Query: 901 DVTDRLAVLVASVYPRKPQAVERHVLPILWHFLNTATRNGTLPGPSGNIRGVVCRLSRSL 960
DVTDRLAVLVASVYPRKPQAVERHVLPILWHFLNTATRNGTLPGPSGNIRGVVCRLSRSL
Sbjct: 901 DVTDRLAVLVASVYPRKPQAVERHVLPILWHFLNTATRNGTLPGPSGNIRGVVCRLSRSL 960
Query: 961 QEHMGSRLLDFAASQPKHVLKTLQELLDSESLGGSRKATDRGVAPDSKTTGSSYPFQLD 1019
QEHMGSRLLDFAASQPKHVLKTLQELLDSESLGGSRKATDRGVAPDSKTTGSSYPFQLD
Sbjct: 961 QEHMGSRLLDFAASQPKHVLKTLQELLDSESLGGSRKATDRGVAPDSKTTGSSYPFQLD 1019
>gi|93102424 hypothetical protein LOC23116 [Homo sapiens]
Length = 1720
Score = 332 bits (851), Expect = 1e-90
Identities = 237/651 (36%), Positives = 333/651 (51%), Gaps = 119/651 (18%)
Query: 350 QVTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCLGSQRAFMKEGLLPLRGSGTL 409
+V+ISKS KM+ K+ +E EL + C ++ + +R +GT
Sbjct: 1170 KVSISKSTYNKMRQKRKEEKELFHNKD-----------CEKKEKNSWER----MRHTGT- 1213
Query: 410 SVPTRLSGPCRNDVSIILRKWASRASLPSIPISRQEPRFARHASANSLPAVLTLGSPEWE 469
K AS + P+ IS+ + R +P+V
Sbjct: 1214 ------------------EKMASESETPTGAISQYKER---------MPSVT-------H 1239
Query: 470 EEEEMDLRACKELRPFSNPELGLRDALQCLNSSDWQMKEKGLVSIQRLAACHSEVLTGKL 529
E MDL ELRPFS PE+ L +AL+ L DW+ K +GL I+ LAA HSE+L KL
Sbjct: 1240 SPEIMDL---SELRPFSKPEIALTEALRLLADEDWEKKIEGLNFIRCLAAFHSEILNTKL 1296
Query: 530 HDVCLVVTGEVTNLRSKVSHLAISTLGDLFQALKKNMDQEAEEIARCLLQKMADTNEFIQ 589
H+ V EV NLRS VS A+ L DLF LKK+MDQE + + LL K ++N FI+
Sbjct: 1297 HETNFAVVQEVKNLRSGVSRAAVVCLSDLFTYLKKSMDQELDTTVKVLLHKAGESNTFIR 1356
Query: 590 RAAGQSLRAMVENVTLARSLVVLTSAGVYHRNPLIRKYAAEHLSAVLEQIGAEKLLSGTR 649
++LRAMV NVT AR AV+ I
Sbjct: 1357 EDVDKALRAMVNNVTPAR--------------------------AVVSLI---------- 1380
Query: 650 DSTDMLVHNLVRLAQDSNQDTRFYGRKMVNILMANTKFDAFLKQSLPSYDLQKVMAAIK- 708
N R+YGRKM+ +M + F+ L++ +PS DL + +++
Sbjct: 1381 -----------------NGGQRYYGRKMLFFMMCHPNFEKMLEKYVPSKDLPYIKDSVRN 1423
Query: 709 --QQGIEDND-ELPSAKGRKV-------LRSLVVCENGLPIKEGLSCNGPRLVGLRSTLQ 758
Q+G+ + + PSAKGR+ RS V + E + R V +S +
Sbjct: 1424 LQQKGLGEIPLDTPSAKGRRSHTGSVGNTRSSSVSRDAFNSAER-AVTEVREVTRKSVPR 1482
Query: 759 GRGEMVEQLRELTRLLEAKDFRSRMEGVGQLLELCKAKTELVTAHLVQVFDAFTPRLQDS 818
E E L+ +T LL AKDFR R+ G+ QLL + +LV ++V++FDAF RL DS
Sbjct: 1483 NSLESAEYLKLITGLLNAKDFRDRINGIKQLLSDTENNQDLVVGNIVKIFDAFKSRLHDS 1542
Query: 819 NKKVNQWALESFAKMIPLLRESLHPMLLSIIITVADN-LNSKNSGIYAAAVAVLDAMVES 877
N KVN ALE+ KMIPLLR+ L P++ +I + DN LNSKN GIYAAA V+ A+ +
Sbjct: 1543 NSKVNLVALETMHKMIPLLRDHLSPIINMLIPAIVDNNLNSKNPGIYAAATNVVQALSQH 1602
Query: 878 LDNLCLLPALAGRVRFLSGRAVLDVTDRLAVLVASVYPRKPQAVERHVLPILWHFLNTAT 937
+DN LL + +FL+G+A D+T++LA +V +Y RKP A E+ VL +LWH L T
Sbjct: 1603 VDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVTELYQRKPHATEQKVLVVLWHLLGNMT 1662
Query: 938 RNGTLPGPSGNIRGVVCRLSRSLQEHMGSRLLDFAASQPKHVLKTLQELLD 988
+G+LPG GNIR +LS++L MG LL+ AASQP H+ K+L+ELLD
Sbjct: 1663 NSGSLPGAGGNIRTATAKLSKALFAQMGQNLLNQAASQPPHIKKSLEELLD 1713
Score = 35.4 bits (80), Expect = 0.28
Identities = 80/338 (23%), Positives = 139/338 (41%), Gaps = 66/338 (19%)
Query: 558 LFQALKKNMDQEAEEIARCLLQKMADTNEFIQRAAGQSLRAMVENVTLARSLVVLTSAGV 617
L++AL + + + + R LQ ++D Q AGQ A ++ L LVV +
Sbjct: 136 LYRALGRVLVEGGSDEKRLCLQLLSDVLRG-QGEAGQLEEAF--SLALLPQLVV----SL 188
Query: 618 YHRNPLIRKYAAEHLSAVLE-----------QIGAEKLLSGTRDSTDMLVHNL------- 659
NP +RK A + L L+ Q G E + R ST +L+ L
Sbjct: 189 REENPALRKDALQILHICLKRSPGEVLRTLIQQGLESTDARLRASTALLLPILLTTEDLL 248
Query: 660 ---------VRLAQ-------DSNQDTRFYGRKMVNILMANTKFDAFLKQSLPSYDLQKV 703
+ LA+ + +T F + + + +F +++ + LPS
Sbjct: 249 LGLDLTEVIISLARKLGDQETEEESETAFSALQQIGERLGQDRFQSYISR-LPS------ 301
Query: 704 MAAIKQQGIEDNDELPSAKGRKVLRSLVVCENGLPIKEGLSCNGPRLVGLRSTLQGRGEM 763
A+++ N L S G +V L + +G P ++ L C V L ++ G +
Sbjct: 302 --ALRRHY---NRRLESQFGSQVPYYLELEASGFP-EDPLPC----AVTLSNSNLKFGII 351
Query: 764 VEQLRELTRLLEAKDFRSRMEGVGQLLELCKAKTELVTAH--LVQVFDAFTPRLQDSNKK 821
++L +RLL+ +D+++R + V +L ++ T H LV L DSN K
Sbjct: 352 PQELH--SRLLDQEDYKNRTQAVEELKQVLGKFNPSSTPHSSLVGFISLLYNLLDDSNFK 409
Query: 822 VNQWALESFAKMIPLLRES----LHPMLLSIIITVADN 855
V LE ++ L E L P++ + + +ADN
Sbjct: 410 VVHGTLEVLHLLVIRLGEQVQQFLGPVIAASVKVLADN 447
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 48.5 bits (114), Expect = 3e-05
Identities = 61/227 (26%), Positives = 86/227 (37%), Gaps = 31/227 (13%)
Query: 114 ANSVARDTIQIKDKLKKRRLSEGLAASSRASLDP---GGGPQGVPLHSTIPRATSQRLLR 170
A +A D Q + +KRRL + + +S + L+P G G G+P PR + Q R
Sbjct: 419 ARELAPDFYQPGPEYQKRRLLQEILENSESLLEPPDRGAGAAGLPQP---PRESPQLHER 475
Query: 171 -VPRP---MPLIQSIPTTPEAS--GVKEKGLDLPGSIPGPH--ELRPGAQEAQISWQYLH 222
PRP P P P+ GV + GL PG+ G E ++ + +
Sbjct: 476 ETPRPEGGSPSPAGTPPQPKRPRPGVSKDGLLSPGAWNGEPSGEGSRSVTPSEGAGRRSP 535
Query: 223 CNDEKMQKSLGAIVIPPIPKAR------------TVAATPSRVPGSLPSPLPPGQGVLTG 270
+ ++ A+ PP P V TP P P P G +
Sbjct: 536 ARPATERMAIEALQAPPAPSREPEVALYQGYHSYAVRTTPPEPPPFEDQPEPEVSGSESA 595
Query: 271 LRAPRTR-----LARGSGPREKTPASLEPKPLASPIRDRPAAAKKPA 312
+P T RG P +TPA LEPKP+ R A K A
Sbjct: 596 PSSPATAPLQAPTLRGPEPARETPAKLEPKPIIPKAEPRAKARKTEA 642
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 43.1 bits (100), Expect = 0.001
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 20/230 (8%)
Query: 108 PSPESEANSVARDTIQIKDKLKKRRLSEGLAASSRASLDPGGGPQGVPLHSTIPRATSQR 167
P P E ++ T+ ++ +S GL R + G GP P+ +P A +
Sbjct: 135 PDPGRET-ALGTATLSLRSSPTAGSVSTGLVGKQR---EGGNGPWRAPVFR-LPGARLRL 189
Query: 168 LLRVPRPMPLIQSIPTTPEASGVKE-KGLD-LPGSIPGPHELRPGAQE-AQISWQYLHCN 224
++P P L ++ P TP G +G L P +LR GA + + + C+
Sbjct: 190 SSQLPSPTTLPRAAPLTPYRPGSPSPRGHSRLRSRPPTRAQLRVGANPLSPVPARLRGCH 249
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGS---LPSPLPPGQGVLTGLRAPRTRLARG 281
+ + + RT+ P P LP P L L++ R A G
Sbjct: 250 SVRPEGG-------GVRSCRTLGCCPPTSPHQPPRLPVTPVPQSVALPSLQSARPAAA-G 301
Query: 282 SGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTAFSFDCAR 331
+ PR +P + L++ DRP ++P P SAPTL + D R
Sbjct: 302 AAPR-LSPQAARCTALSTEKPDRPGPPRRPPAPTPVSAPTLRSAPLDAHR 350
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 43.1 bits (100), Expect = 0.001
Identities = 53/188 (28%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 145 LDPGGGPQGVPLHSTIPRATSQRLLRV-PRPMPLIQSIPTTPEASGVKEKGLDLP-GSIP 202
L P + PL +T P TS + P +P Q PTT G+ +K + L G +P
Sbjct: 428 LPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPK-QPAPTT--IGGLNKKPMSLASGLVP 484
Query: 203 GPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLP 262
RP A+ S L D K + A KA A+PS+ P S P+
Sbjct: 485 AAPPKRPAVASARPS--ILPSKDVKPKPIADA-------KAPEKRASPSK-PASAPASRS 534
Query: 263 PGQGVLTGLRAPRTRLARGSGPREKTPASLEP-KPLASPIRDRPAAAKK---PALPFSQS 318
+ T + +GP ++P++L P KP A +PA KK ++P S
Sbjct: 535 GSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLS 594
Query: 319 APTLTAFS 326
P T+ S
Sbjct: 595 RPKSTSTS 602
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 43.1 bits (100), Expect = 0.001
Identities = 53/188 (28%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 145 LDPGGGPQGVPLHSTIPRATSQRLLRV-PRPMPLIQSIPTTPEASGVKEKGLDLP-GSIP 202
L P + PL +T P TS + P +P Q PTT G+ +K + L G +P
Sbjct: 693 LPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPK-QPAPTT--IGGLNKKPMSLASGLVP 749
Query: 203 GPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLP 262
RP A+ S L D K + A KA A+PS+ P S P+
Sbjct: 750 AAPPKRPAVASARPS--ILPSKDVKPKPIADA-------KAPEKRASPSK-PASAPASRS 799
Query: 263 PGQGVLTGLRAPRTRLARGSGPREKTPASLEP-KPLASPIRDRPAAAKK---PALPFSQS 318
+ T + +GP ++P++L P KP A +PA KK ++P S
Sbjct: 800 GSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLS 859
Query: 319 APTLTAFS 326
P T+ S
Sbjct: 860 RPKSTSTS 867
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 43.1 bits (100), Expect = 0.001
Identities = 53/188 (28%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 145 LDPGGGPQGVPLHSTIPRATSQRLLRV-PRPMPLIQSIPTTPEASGVKEKGLDLP-GSIP 202
L P + PL +T P TS + P +P Q PTT G+ +K + L G +P
Sbjct: 428 LPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPK-QPAPTT--IGGLNKKPMSLASGLVP 484
Query: 203 GPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLP 262
RP A+ S L D K + A KA A+PS+ P S P+
Sbjct: 485 AAPPKRPAVASARPS--ILPSKDVKPKPIADA-------KAPEKRASPSK-PASAPASRS 534
Query: 263 PGQGVLTGLRAPRTRLARGSGPREKTPASLEP-KPLASPIRDRPAAAKK---PALPFSQS 318
+ T + +GP ++P++L P KP A +PA KK ++P S
Sbjct: 535 GSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLS 594
Query: 319 APTLTAFS 326
P T+ S
Sbjct: 595 RPKSTSTS 602
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 43.1 bits (100), Expect = 0.001
Identities = 53/188 (28%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 145 LDPGGGPQGVPLHSTIPRATSQRLLRV-PRPMPLIQSIPTTPEASGVKEKGLDLP-GSIP 202
L P + PL +T P TS + P +P Q PTT G+ +K + L G +P
Sbjct: 693 LPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPK-QPAPTT--IGGLNKKPMSLASGLVP 749
Query: 203 GPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLP 262
RP A+ S L D K + A KA A+PS+ P S P+
Sbjct: 750 AAPPKRPAVASARPS--ILPSKDVKPKPIADA-------KAPEKRASPSK-PASAPASRS 799
Query: 263 PGQGVLTGLRAPRTRLARGSGPREKTPASLEP-KPLASPIRDRPAAAKK---PALPFSQS 318
+ T + +GP ++P++L P KP A +PA KK ++P S
Sbjct: 800 GSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLS 859
Query: 319 APTLTAFS 326
P T+ S
Sbjct: 860 RPKSTSTS 867
>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
Length = 534
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 46/197 (23%)
Query: 113 EANSVARDTIQIKDKLKKRRLSE----GLAASSRASLDPGGGPQGVPLHSTIPRATSQRL 168
E + R+T +++ +K+ E G A ++ +L GP+G + ST
Sbjct: 354 EGSQSTRETPSEEEQAQKQSGMEQGRLGSAPAASPALASPEGPKGESVASTA-------- 405
Query: 169 LRVPRPMPLIQSIPTTPEASGVKEKGLDLPGS-IPGPHE------LRPGAQEAQISWQYL 221
S+P +P+ + L L G+ IPGP E LRPGAQE+ +SW
Sbjct: 406 ----------SSVPCSPQEPDLAPLDLSLGGAGIPGPRESGCVLGLRPGAQESPVSWP-- 453
Query: 222 HCNDEKMQKSLG------AIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPR 275
+ Q+ LG + + P+ + A P PG S G GL APR
Sbjct: 454 ---EGSKQQPLGWSNHQAELEVQTCPEPQRGAGLPE--PGEDRS---GKSGAQQGL-APR 504
Query: 276 TRLARGSGPREKTPASL 292
+R RG R + A +
Sbjct: 505 SRPTRGGSQRSRGTAGV 521
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 42.4 bits (98), Expect = 0.002
Identities = 51/208 (24%), Positives = 72/208 (34%), Gaps = 22/208 (10%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTPEASG---VKEKGLDLPGSIPGPHELRPGAQEAQ 215
T P+ + + P P ++ PTTP+ + +KE P P P EL P +
Sbjct: 549 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK-PAPKELAPTTTKEP 607
Query: 216 ISWQYLHCNDEKMQKSLGAIVIPPIPK--ARTVAATPSRVPGSLPSPLPPGQGVLTGLRA 273
S C+ P PK A T P+ P+P P T L+
Sbjct: 608 TSTT---CDKPA----------PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKE 654
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKK--PALPFSQSAPTLTAFSFDCAR 331
P + P+E P + + + + P K+ P P + APT
Sbjct: 655 PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP-KEPAPTTPKKPAPTTP 713
Query: 332 EACPPLKEEDQKEIGTKIQVTISKSARE 359
E PP E TK TI KS E
Sbjct: 714 ETPPPTTSEVSTPTTTKEPTTIHKSPDE 741
Score = 36.6 bits (83), Expect = 0.12
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 235 IVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLR-----------------APRTR 277
++ P PKA T P+ P+P P + T + AP T
Sbjct: 193 VLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTT 252
Query: 278 LARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPT 321
+ + P+E P + + +P P K+PA ++SAPT
Sbjct: 253 KSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT 296
Score = 32.3 bits (72), Expect = 2.3
Identities = 48/204 (23%), Positives = 66/204 (32%), Gaps = 31/204 (15%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTP-EASGVKEKGLDLPGSIPGPHELRPGAQEAQIS 217
T P+ + + P P I+S PTTP E + K P P + A
Sbjct: 219 TTPKEPASTTPKEPTPTT-IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTP-- 275
Query: 218 WQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSL----PSPLPPGQGVLTGLRA 273
++ P P A T + P P+P P + T +
Sbjct: 276 -----------KEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 324
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTAFSFDCAREA 333
P + P K PA PK A P A KKPA P + P T +E
Sbjct: 325 PTPTTPKEPAPTTKEPAPTTPKEPA------PTAPKKPA-PTTPKEPAPTT-----PKEP 372
Query: 334 CPPLKEEDQKEIGTKIQVTISKSA 357
P +E + T +KSA
Sbjct: 373 APTTTKEPSPTTPKEPAPTTTKSA 396
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 42.4 bits (98), Expect = 0.002
Identities = 51/208 (24%), Positives = 72/208 (34%), Gaps = 22/208 (10%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTPEASG---VKEKGLDLPGSIPGPHELRPGAQEAQ 215
T P+ + + P P ++ PTTP+ + +KE P P P EL P +
Sbjct: 590 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK-PAPKELAPTTTKEP 648
Query: 216 ISWQYLHCNDEKMQKSLGAIVIPPIPK--ARTVAATPSRVPGSLPSPLPPGQGVLTGLRA 273
S C+ P PK A T P+ P+P P T L+
Sbjct: 649 TSTT---CDKPA----------PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKE 695
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKK--PALPFSQSAPTLTAFSFDCAR 331
P + P+E P + + + + P K+ P P + APT
Sbjct: 696 PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP-KEPAPTTPKKPAPTTP 754
Query: 332 EACPPLKEEDQKEIGTKIQVTISKSARE 359
E PP E TK TI KS E
Sbjct: 755 ETPPPTTSEVSTPTTTKEPTTIHKSPDE 782
Score = 36.6 bits (83), Expect = 0.12
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 235 IVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLR-----------------APRTR 277
++ P PKA T P+ P+P P + T + AP T
Sbjct: 234 VLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTT 293
Query: 278 LARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPT 321
+ + P+E P + + +P P K+PA ++SAPT
Sbjct: 294 KSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT 337
Score = 32.3 bits (72), Expect = 2.3
Identities = 48/204 (23%), Positives = 66/204 (32%), Gaps = 31/204 (15%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTP-EASGVKEKGLDLPGSIPGPHELRPGAQEAQIS 217
T P+ + + P P I+S PTTP E + K P P + A
Sbjct: 260 TTPKEPASTTPKEPTPTT-IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTP-- 316
Query: 218 WQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSL----PSPLPPGQGVLTGLRA 273
++ P P A T + P P+P P + T +
Sbjct: 317 -----------KEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 365
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTAFSFDCAREA 333
P + P K PA PK A P A KKPA P + P T +E
Sbjct: 366 PTPTTPKEPAPTTKEPAPTTPKEPA------PTAPKKPA-PTTPKEPAPTT-----PKEP 413
Query: 334 CPPLKEEDQKEIGTKIQVTISKSA 357
P +E + T +KSA
Sbjct: 414 APTTTKEPSPTTPKEPAPTTTKSA 437
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 42.4 bits (98), Expect = 0.002
Identities = 51/208 (24%), Positives = 72/208 (34%), Gaps = 22/208 (10%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTPEASG---VKEKGLDLPGSIPGPHELRPGAQEAQ 215
T P+ + + P P ++ PTTP+ + +KE P P P EL P +
Sbjct: 642 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK-PAPKELAPTTTKEP 700
Query: 216 ISWQYLHCNDEKMQKSLGAIVIPPIPK--ARTVAATPSRVPGSLPSPLPPGQGVLTGLRA 273
S C+ P PK A T P+ P+P P T L+
Sbjct: 701 TSTT---CDKPA----------PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKE 747
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKK--PALPFSQSAPTLTAFSFDCAR 331
P + P+E P + + + + P K+ P P + APT
Sbjct: 748 PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP-KEPAPTTPKKPAPTTP 806
Query: 332 EACPPLKEEDQKEIGTKIQVTISKSARE 359
E PP E TK TI KS E
Sbjct: 807 ETPPPTTSEVSTPTTTKEPTTIHKSPDE 834
Score = 37.7 bits (86), Expect = 0.056
Identities = 54/248 (21%), Positives = 91/248 (36%), Gaps = 37/248 (14%)
Query: 109 SPESEANSVARDTIQIKDKLKKRRLSEG-----LAASSRASLDPGGGPQGVPLHSTI--- 160
S S AN + +++KD K R + + + + LD G P ST
Sbjct: 144 SKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHN 203
Query: 161 -----PRATSQRLLRVPRPMPLIQSIPTTPEASGV--KEKGLDLPGSIPGPHELRPGAQE 213
P+ T+ + + PRP L + T+ E S KE ++ + + +E
Sbjct: 204 KVSTSPKITTAKPIN-PRPS-LPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKE 261
Query: 214 AQISWQYLHCNDEKMQKSLGA---IVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTG 270
S + ++ K L ++ P PKA T P+ P+P P + T
Sbjct: 262 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 321
Query: 271 LR-----------------APRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPAL 313
+ AP T + + P+E P + + +P P K+PA
Sbjct: 322 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP 381
Query: 314 PFSQSAPT 321
++SAPT
Sbjct: 382 TTTKSAPT 389
Score = 32.3 bits (72), Expect = 2.3
Identities = 48/204 (23%), Positives = 66/204 (32%), Gaps = 31/204 (15%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTP-EASGVKEKGLDLPGSIPGPHELRPGAQEAQIS 217
T P+ + + P P I+S PTTP E + K P P + A
Sbjct: 312 TTPKEPASTTPKEPTPTT-IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTP-- 368
Query: 218 WQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSL----PSPLPPGQGVLTGLRA 273
++ P P A T + P P+P P + T +
Sbjct: 369 -----------KEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 417
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTAFSFDCAREA 333
P + P K PA PK A P A KKPA P + P T +E
Sbjct: 418 PTPTTPKEPAPTTKEPAPTTPKEPA------PTAPKKPA-PTTPKEPAPTT-----PKEP 465
Query: 334 CPPLKEEDQKEIGTKIQVTISKSA 357
P +E + T +KSA
Sbjct: 466 APTTTKEPSPTTPKEPAPTTTKSA 489
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 42.4 bits (98), Expect = 0.002
Identities = 51/208 (24%), Positives = 72/208 (34%), Gaps = 22/208 (10%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTPEASG---VKEKGLDLPGSIPGPHELRPGAQEAQ 215
T P+ + + P P ++ PTTP+ + +KE P P P EL P +
Sbjct: 683 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK-PAPKELAPTTTKEP 741
Query: 216 ISWQYLHCNDEKMQKSLGAIVIPPIPK--ARTVAATPSRVPGSLPSPLPPGQGVLTGLRA 273
S C+ P PK A T P+ P+P P T L+
Sbjct: 742 TSTT---CDKPA----------PTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKE 788
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKK--PALPFSQSAPTLTAFSFDCAR 331
P + P+E P + + + + P K+ P P + APT
Sbjct: 789 PAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP-KEPAPTTPKKPAPTTP 847
Query: 332 EACPPLKEEDQKEIGTKIQVTISKSARE 359
E PP E TK TI KS E
Sbjct: 848 ETPPPTTSEVSTPTTTKEPTTIHKSPDE 875
Score = 37.7 bits (86), Expect = 0.056
Identities = 54/248 (21%), Positives = 91/248 (36%), Gaps = 37/248 (14%)
Query: 109 SPESEANSVARDTIQIKDKLKKRRLSEG-----LAASSRASLDPGGGPQGVPLHSTI--- 160
S S AN + +++KD K R + + + + LD G P ST
Sbjct: 185 SKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHN 244
Query: 161 -----PRATSQRLLRVPRPMPLIQSIPTTPEASGV--KEKGLDLPGSIPGPHELRPGAQE 213
P+ T+ + + PRP L + T+ E S KE ++ + + +E
Sbjct: 245 KVSTSPKITTAKPIN-PRPS-LPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKE 302
Query: 214 AQISWQYLHCNDEKMQKSLGA---IVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTG 270
S + ++ K L ++ P PKA T P+ P+P P + T
Sbjct: 303 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 362
Query: 271 LR-----------------APRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPAL 313
+ AP T + + P+E P + + +P P K+PA
Sbjct: 363 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP 422
Query: 314 PFSQSAPT 321
++SAPT
Sbjct: 423 TTTKSAPT 430
Score = 32.3 bits (72), Expect = 2.3
Identities = 48/204 (23%), Positives = 66/204 (32%), Gaps = 31/204 (15%)
Query: 159 TIPRATSQRLLRVPRPMPLIQSIPTTP-EASGVKEKGLDLPGSIPGPHELRPGAQEAQIS 217
T P+ + + P P I+S PTTP E + K P P + A
Sbjct: 353 TTPKEPASTTPKEPTPTT-IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTP-- 409
Query: 218 WQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSL----PSPLPPGQGVLTGLRA 273
++ P P A T + P P+P P + T +
Sbjct: 410 -----------KEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 458
Query: 274 PRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTAFSFDCAREA 333
P + P K PA PK A P A KKPA P + P T +E
Sbjct: 459 PTPTTPKEPAPTTKEPAPTTPKEPA------PTAPKKPA-PTTPKEPAPTT-----PKEP 506
Query: 334 CPPLKEEDQKEIGTKIQVTISKSA 357
P +E + T +KSA
Sbjct: 507 APTTTKEPSPTTPKEPAPTTTKSA 530
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 41.2 bits (95), Expect = 0.005
Identities = 51/187 (27%), Positives = 70/187 (37%), Gaps = 36/187 (19%)
Query: 147 PGGGPQ-GVPLHSTIPRATSQR----LLRVPRPM--PLIQSIPTTPEASGVKEKGLDLPG 199
PG Q P + +PR+ S L+RVPRP+ P +PT P+ D PG
Sbjct: 96 PGAAAQPSKPTSTVLPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQ---------DTPG 146
Query: 200 SIPGPHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPS 259
PG + A L + S A P P+A + AA+P S P
Sbjct: 147 GPASEPAQPPGERSADPPLPALELAQATERPSADAA---PPPRAPSEAASPC----SDPP 199
Query: 260 PLPPGQGVLTG-------------LRAPRTRLARGSGPREKTPASLEPKPLASPIRDRPA 306
PG G G + AP T R P + S EP P +SP+ R
Sbjct: 200 DAEPGPGAAKGPPQQKPCMLPVRCVPAPATLRLRAEEPGLRRQLSEEPSPRSSPLLLRRL 259
Query: 307 AAKKPAL 313
+ ++ L
Sbjct: 260 SVEESGL 266
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.8 bits (94), Expect = 0.007
Identities = 54/233 (23%), Positives = 79/233 (33%), Gaps = 29/233 (12%)
Query: 99 LGDQPLVLLPSPESEANSVARDTIQIKDKLKKRRLSEGLAASSRAS--------LDPGGG 150
L D P L +PE A++ + +++ ++RR R GG
Sbjct: 491 LRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGG 550
Query: 151 PQGVPLHSTI----PRATSQRLLRVPRPM-PLIQSIPTTPEASGVKEKGLDLPGSIPGPH 205
P PL + R+ +R R+ RP P + S+P A + PGP
Sbjct: 551 PSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPV 610
Query: 206 ELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQ 265
G Q + + G + P P A P+ PG +P P PP
Sbjct: 611 AQPTGPQP------------QSAGSTSGPVPQPACPPPGP-APHPTGPPGPIPVPAPPQI 657
Query: 266 GVLTGLRAPRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQS 318
T L A ++ + P TP L P P P A P S+S
Sbjct: 658 ATSTSLLAAQSLVPPPGLPGSSTPGVL---PYFPPGLPPPDAGGAPQSSMSES 707
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.8 bits (94), Expect = 0.007
Identities = 54/233 (23%), Positives = 79/233 (33%), Gaps = 29/233 (12%)
Query: 99 LGDQPLVLLPSPESEANSVARDTIQIKDKLKKRRLSEGLAASSRAS--------LDPGGG 150
L D P L +PE A++ + +++ ++RR R GG
Sbjct: 491 LRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGG 550
Query: 151 PQGVPLHSTI----PRATSQRLLRVPRPM-PLIQSIPTTPEASGVKEKGLDLPGSIPGPH 205
P PL + R+ +R R+ RP P + S+P A + PGP
Sbjct: 551 PSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPV 610
Query: 206 ELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQ 265
G Q + + G + P P A P+ PG +P P PP
Sbjct: 611 AQPTGPQP------------QSAGSTSGPVPQPACPPPGP-APHPTGPPGPIPVPAPPQI 657
Query: 266 GVLTGLRAPRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQS 318
T L A ++ + P TP L P P P A P S+S
Sbjct: 658 ATSTSLLAAQSLVPPPGLPGSSTPGVL---PYFPPGLPPPDAGGAPQSSMSES 707
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.8 bits (94), Expect = 0.007
Identities = 54/233 (23%), Positives = 79/233 (33%), Gaps = 29/233 (12%)
Query: 99 LGDQPLVLLPSPESEANSVARDTIQIKDKLKKRRLSEGLAASSRAS--------LDPGGG 150
L D P L +PE A++ + +++ ++RR R GG
Sbjct: 491 LRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGG 550
Query: 151 PQGVPLHSTI----PRATSQRLLRVPRPM-PLIQSIPTTPEASGVKEKGLDLPGSIPGPH 205
P PL + R+ +R R+ RP P + S+P A + PGP
Sbjct: 551 PSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPV 610
Query: 206 ELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQ 265
G Q + + G + P P A P+ PG +P P PP
Sbjct: 611 AQPTGPQP------------QSAGSTSGPVPQPACPPPGP-APHPTGPPGPIPVPAPPQI 657
Query: 266 GVLTGLRAPRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQS 318
T L A ++ + P TP L P P P A P S+S
Sbjct: 658 ATSTSLLAAQSLVPPPGLPGSSTPGVL---PYFPPGLPPPDAGGAPQSSMSES 707
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 40.8 bits (94), Expect = 0.007
Identities = 54/233 (23%), Positives = 79/233 (33%), Gaps = 29/233 (12%)
Query: 99 LGDQPLVLLPSPESEANSVARDTIQIKDKLKKRRLSEGLAASSRAS--------LDPGGG 150
L D P L +PE A++ + +++ ++RR R GG
Sbjct: 352 LRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKEREKRRQERERKERGAGASGG 411
Query: 151 PQGVPLHSTI----PRATSQRLLRVPRPM-PLIQSIPTTPEASGVKEKGLDLPGSIPGPH 205
P PL + R+ +R R+ RP P + S+P A + PGP
Sbjct: 412 PSTDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPV 471
Query: 206 ELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQ 265
G Q + + G + P P A P+ PG +P P PP
Sbjct: 472 AQPTGPQP------------QSAGSTSGPVPQPACPPPGP-APHPTGPPGPIPVPAPPQI 518
Query: 266 GVLTGLRAPRTRLARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQS 318
T L A ++ + P TP L P P P A P S+S
Sbjct: 519 ATSTSLLAAQSLVPPPGLPGSSTPGVL---PYFPPGLPPPDAGGAPQSSMSES 568
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 40.4 bits (93), Expect = 0.009
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 250 PSRVPGSLPSPLPPGQG-VLTGLRAPRTRLARGSGPREKTP---ASLEPKPLASPIRDRP 305
PSR P + S +PP +G V G A G R + P A EP P +P +
Sbjct: 2264 PSRFP--IASSVPPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKE 2321
Query: 306 AA-AKKPALPFSQSAPTLTAFSFDCAREACPPLKEED--QKEIGTKIQVTISKSAREKMQ 362
AA A PA Q P A + P ++E+ Q+E K Q + + RE+++
Sbjct: 2322 AAGAPAPAPLAGQKPPADAAPGGGSGALSRPGFEKEEASQEERQRKQQEQLLQLERERVE 2381
Query: 363 LKQMKEMELLRRLEEPR 379
L++++++ L LE R
Sbjct: 2382 LEKLRQLRLQEELERER 2398
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 40.4 bits (93), Expect = 0.009
Identities = 64/264 (24%), Positives = 94/264 (35%), Gaps = 42/264 (15%)
Query: 74 GLKLDTPSKGWQARNGHPRNLRALSLGDQPLVLLPSPESEANSVARDTIQIKDKLKKRRL 133
G+ T S +A + HP L+ + +G L+ L E + DT + +L +R L
Sbjct: 920 GICFSTASLVLRATDVHP--LQRIDMGRFDLIGL---EGRVSRYEADTFLPRHRLSRRVL 974
Query: 134 SEGLAASSRASLDPGGGPQGVPLH-----STIPRATSQRLLRVPRPMPLIQSIPTTPEAS 188
E A DP P+ V + +P+ + ++ V P + +P P
Sbjct: 975 LEVATAP-----DPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPP- 1028
Query: 189 GVKEKGLDLPGSIPG--PHELRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTV 246
G + PG +P P L A A + G +++PP+
Sbjct: 1029 GPELSAQPTPGPVPQVLPASLMVSASPAGPPLI-------PASRPPGPVLLPPLQPNS-- 1079
Query: 247 AATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGPREKTPASLEPKP------LASP 300
GSLP LP GVL+G P T P P L P P L P
Sbjct: 1080 --------GSLPQVLPSPLGVLSGTSRPPTP-TLSLKPTPPAPVRLSPAPPPGSSSLLKP 1130
Query: 301 IRDRPAAAKKPALPFSQSAPTLTA 324
+ P PA + S T TA
Sbjct: 1131 LTVPPGYTFPPAAATTTSTTTATA 1154
Score = 38.1 bits (87), Expect = 0.043
Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 12/153 (7%)
Query: 168 LLRVPRPMPLIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCNDEK 227
L+ P + LIQ++ TP + V P + P P L Q+
Sbjct: 1250 LISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQV--------PPT 1301
Query: 228 MQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGPREK 287
M + G + I + +A TP VP P+P PP G L + PR L G P
Sbjct: 1302 MVNNTGVVKI-VVRQAPRDGLTP--VPPLAPAPRPPSSG-LPAVLNPRPTLTPGRLPTPT 1357
Query: 288 TPASLEPKPLASPIRDRPAAAKKPALPFSQSAP 320
+ P P + +R P+ S SAP
Sbjct: 1358 LGTARAPMPTPTLVRPLLKLVHSPSPEVSASAP 1390
Score = 36.6 bits (83), Expect = 0.12
Identities = 61/274 (22%), Positives = 93/274 (33%), Gaps = 34/274 (12%)
Query: 30 PRVLPPGSINSSLPHGEGSLQPEPRALLNNEEPSQLLRGLGQLGGLKLDTPSKGWQARNG 89
P+ L P ++ LP E +L P A PS L G + + P +
Sbjct: 2582 PKDLLPVAVEI-LPVSEKNLSLTPSA------PSLTLEAGSIPNGQEQEAPD------SA 2628
Query: 90 HPRNLRALSLGDQ-PLVLLPSPESEANSVARDTIQIKDKLKKRRLSEGLAASSRASLDPG 148
L L G++ PL + S E A +++ L+ R SE L + + P
Sbjct: 2629 EGTTLTVLPEGEELPLCVSESNGLELPPSAASDEPLQEPLEADRTSEELTEAKTPTSSPE 2688
Query: 149 GGPQGVPLHSTIPRATSQRLLRVPRPMPLIQSIPTTPEASGVKEKGLDLPGSIPGPHELR 208
+ V P +S P P T ++ +G PG PGP LR
Sbjct: 2689 KPQELVTAEVAAPSTSSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLR 2748
Query: 209 --PGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQG 266
PG + + L + Q+ + ++P + + +PS S P PP
Sbjct: 2749 KLPGRLVTVVEEKEL-VRRRRQQRGAASTLVPGVSETSASPGSPSVRSMSGPESSPP--- 2804
Query: 267 VLTGLRAPRTRLARGSGPREKTPASLEPKPLASP 300
GP E P+S P P P
Sbjct: 2805 --------------IGGPCEAAPSSSLPTPPQQP 2824
>gi|24308227 zinc finger protein 687 [Homo sapiens]
Length = 1237
Score = 40.4 bits (93), Expect = 0.009
Identities = 69/284 (24%), Positives = 89/284 (31%), Gaps = 51/284 (17%)
Query: 80 PSKGWQARNGHPRNLRALSLGDQPLVLLPSPESEANSVARDTIQIKDKLKKRRLSEGLAA 139
P K + A S GD P V P+ S+ D + +K E A
Sbjct: 40 PGKPEPGVGSESEDTAAASAGDGPGV--PAQASDHGLPPPDISVVSVIVKNTVCPEQSEA 97
Query: 140 SSRASLDPGGGPQGVPLHSTIPRATSQRLLRVPRP-MPLIQSIPTTPEASGVKEKGLDLP 198
+ S G GV + Q P P +P P P KEKG++
Sbjct: 98 LAGGSAGDGAQAAGVTKEGPVGPHRMQNGFGSPEPSLPGTPHSPAPPSGGTWKEKGMEGK 157
Query: 199 ---------GSIPGPHE--LRPGAQEAQISWQYLHCNDEKMQKSLGAIVIPPIPKARTVA 247
G PG H L P A GA+ PP P + +A
Sbjct: 158 TPLDLFAHFGPEPGDHSDPLPPSAPSPTRE---------------GALTPPPFPSSFELA 202
Query: 248 ATPSRVPGSLPSPLPPGQGVLT----GLRAPRTRLARGSGPREKT---PASLEPKPLASP 300
PG P P G L P+ +GSG K PAS P P+A
Sbjct: 203 QENG--PGMQPPVSSPPLGALKQESCSPHHPQVLAQQGSGSSPKATDIPASASPPPVAG- 259
Query: 301 IRDRPAAAKKPALPFSQSAPTLTAFSFDCAREACPPLKEEDQKE 344
+PF + +P + C PLKEED E
Sbjct: 260 ------------VPFFKQSPGHQSPLASPKVPVCQPLKEEDDDE 291
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 40.0 bits (92), Expect = 0.011
Identities = 87/359 (24%), Positives = 127/359 (35%), Gaps = 51/359 (14%)
Query: 2 GTRDDVPEAKVLVPVAVYCGSIPRTSAGPRVLPPGSINSSLPHGEGSLQPEPRALLNNEE 61
G RD P + + C S SA PR PP S G + +PRA +E
Sbjct: 1614 GGRDSSPSPRAAEELLQRCIS----SALPRRRPPVS---------GLRRRKPRATRLDER 1660
Query: 62 PSQLLRGLGQLGG---LKLDTPSKGWQARNGHPRNLRALSLGDQPLVLLPSPESEANSVA 118
P++ R G+ D S W+A ++ ++ Q SE++S+
Sbjct: 1661 PAEGSRERGEEAAGSDRASDLDSVEWRAIQEGANSI--VTWLHQAAAATREASSESDSIL 1718
Query: 119 R--------DTIQIKDKLKKRRLSEGLAASSR-------ASLDPGGGPQGVPLHSTIPRA 163
T+Q K +K R +EG S+R AS+ G P+ P PR
Sbjct: 1719 SFVSGLSVGSTLQ-PPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRS-PAGPEKPRG 1776
Query: 164 TSQRLLRVPRPMPLIQSIPTTPEASGVKEKGLDLPGSIP---GPHELRPGAQEAQIS--W 218
T + VP + I A + KG P + P P L A A++
Sbjct: 1777 TQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPG 1836
Query: 219 QYLHCNDEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRL 278
Q + + K+ + P++ T A ++ P S S P L R P T+
Sbjct: 1837 QQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQA 1896
Query: 279 ARGSGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTAFSFDCAREACPPL 337
A P P ASP+ PA +Q +P F AR PPL
Sbjct: 1897 AGAL-----------PGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGPPPL 1944
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 39.7 bits (91), Expect = 0.015
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 30/239 (12%)
Query: 166 QRLLRVPRPMP-LIQSIPTTPEASGVKEKGLDLPGSIPGPHELRPGAQEAQISWQYLHCN 224
Q ++ RPMP + Q +PT P S V G PG PGP PG A ++ H
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPS-VSATG---PGPGPGPGP-GPGPGPAPPNYSRPH-- 253
Query: 225 DEKMQKSLGAIVIPPIPKARTVAATPSRVPGSLPSPLPPGQGVLTGLRAPRTRLARGSGP 284
+G +PP + P + PG P P P +G + AP + + P
Sbjct: 254 ------GMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWP--EGPMANAAAPTSTPQKLIPP 305
Query: 285 R---EKTPASLEPKPLASPI----RDRPAAAKKPA--LPFSQSAPTLTAFSFDCAREACP 335
+ +PA P ASP+ P +PA +P Q +T +
Sbjct: 306 QPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVE 365
Query: 336 PLKEED---QKEIGTKIQ--VTISKSAREKMQLKQMKEMELLRRLEEPRTGQELTSQCL 389
L+E + Q I +IQ + S ++ K E++ LR L R ++ C+
Sbjct: 366 ILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM 424
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 39.7 bits (91), Expect = 0.015
Identities = 79/295 (26%), Positives = 109/295 (36%), Gaps = 60/295 (20%)
Query: 30 PRVLPPGSINSSLPHGEGSLQPEPRAL--LNNEEPSQLLRGLG------QLGGLKLDTPS 81
P + PP S+ S+P LQP+P A + + PS GLG + GL L PS
Sbjct: 1305 PPLSPPKSVPPSVP--ARGLQPQPPATPAVPHPPPSGAF-GLGGALEAAESEGLGLGCPS 1361
Query: 82 KGWQARNGHPRNLRALSLGDQPLVLLPSPES-EANSVARDTIQIKDKLKKRRLSEGLAAS 140
+ RNL L PS S E +SVA K R L E ++++
Sbjct: 1362 PCKRLDEELKRNLETL----------PSFSSDEEDSVA----------KNRDLQESISSA 1401
Query: 141 SRASLDPG-GGPQGVPLHSTIPRATSQRLLRVPRPMPLIQSIPT-----TPEASGVKEKG 194
A DP GP+ P A + VP P PL +P+ TPE ++EK
Sbjct: 1402 ISALDDPPLAGPKDTSTPDGPPLAPAAA---VPGPPPL-PGLPSANSNGTPEPPLLEEKP 1457
Query: 195 LDLPGSIPGPHELRPGAQEAQISWQYLHCNDEKMQKSLGAI--VIPPIPKARTVAATPSR 252
P P P P Q +L + ++ P P + P
Sbjct: 1458 PPTPPPAPTPQPQPPPPPPPP-------------QPALPSPPPLVAPTPSSPPPPPLPPP 1504
Query: 253 VPGSLPSPLPPGQGVLTGLRAPRTRLARGSGPREKTPASLEPKPLASPIRDRPAA 307
P ++PSP PP L AP A P + P + +PL + AA
Sbjct: 1505 PPPAMPSPPPPPPPAAAPLAAPPEEPA---APSPEDPELPDTRPLHLAKKQETAA 1556
Score = 30.4 bits (67), Expect = 8.9
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 12/103 (11%)
Query: 226 EKMQKSLGAIVIPPI--PKARTVAATPSRVPGS-LPSPLP-PGQGVLTGLRAPRTRLARG 281
E + ++ A+ PP+ PK + P P + +P P P PG P L
Sbjct: 1396 ESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLE- 1454
Query: 282 SGPREKTPASLEPKPLASPIRDRPAAAKKPALPFSQSAPTLTA 324
EK P + P P P P +PALP S P L A
Sbjct: 1455 ----EKPPPTPPPAPTPQPQPPPPPPPPQPALP---SPPPLVA 1490
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,327,413
Number of Sequences: 37866
Number of extensions: 2157191
Number of successful extensions: 9736
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 315
Number of HSP's that attempted gapping in prelim test: 8937
Number of HSP's gapped (non-prelim): 990
length of query: 1019
length of database: 18,247,518
effective HSP length: 112
effective length of query: 907
effective length of database: 14,006,526
effective search space: 12703919082
effective search space used: 12703919082
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.