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Search of human proteins with 109659841
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109659841 dendritic cell-derived ubiquitin-like protein
[Homo sapiens]
(234 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109659841 dendritic cell-derived ubiquitin-like protein [Homo... 486 e-138
gi|13376439 ubiquitin domain containing 1 [Homo sapiens] 308 3e-84
gi|11024714 ubiquitin B precursor [Homo sapiens] 45 5e-05
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom... 45 5e-05
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ... 45 5e-05
gi|67191208 ubiquitin C [Homo sapiens] 45 5e-05
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s... 45 5e-05
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ... 45 5e-05
gi|5453760 neural precursor cell expressed, developmentally down... 45 7e-05
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens] 44 2e-04
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens] 44 2e-04
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens] 44 2e-04
gi|27894376 cell adhesion molecule with homology to L1CAM precur... 35 0.042
gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens] 35 0.072
gi|166158925 endothelial cell growth factor 1 (platelet-derived)... 30 1.8
gi|4503445 endothelial cell growth factor 1 (platelet-derived) p... 30 1.8
gi|166158922 endothelial cell growth factor 1 (platelet-derived)... 30 1.8
gi|18104993 protein tyrosine phosphatase, non-receptor type 6 is... 29 3.0
gi|18104989 protein tyrosine phosphatase, non-receptor type 6 is... 29 3.0
gi|18104991 protein tyrosine phosphatase, non-receptor type 6 is... 29 3.0
gi|241982780 programmed cell death 6 interacting protein isoform... 28 5.2
gi|22027538 programmed cell death 6 interacting protein isoform ... 28 5.2
gi|105990514 filamin B, beta (actin binding protein 278) [Homo s... 28 5.2
gi|169206322 PREDICTED: similar to hCG30646 [Homo sapiens] 28 6.8
gi|239750562 PREDICTED: similar to hCG30646 [Homo sapiens] 28 6.8
gi|239744861 PREDICTED: similar to hCG30646 [Homo sapiens] 28 6.8
gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens] 28 8.9
gi|154275767 ADAMTS-like 1 isoform 4 precursor [Homo sapiens] 28 8.9
gi|154275765 ADAMTS-like 1 isoform 2 precursor [Homo sapiens] 28 8.9
gi|40548415 dishevelled associated activator of morphogenesis 2 ... 28 8.9
>gi|109659841 dendritic cell-derived ubiquitin-like protein [Homo
sapiens]
Length = 234
Score = 486 bits (1252), Expect = e-138
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MGGCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDT 60
MGGCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDT
Sbjct: 1 MGGCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDT 60
Query: 61 APAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPV 120
APAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPV
Sbjct: 61 APAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPV 120
Query: 121 YCLAPPINMIEEKSDIETLDIPEPPPNSGYECQLRLRLSTGKDLKLVVRSTDTVFHMKRR 180
YCLAPPINMIEEKSDIETLDIPEPPPNSGYECQLRLRLSTGKDLKLVVRSTDTVFHMKRR
Sbjct: 121 YCLAPPINMIEEKSDIETLDIPEPPPNSGYECQLRLRLSTGKDLKLVVRSTDTVFHMKRR 180
Query: 181 LHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQPVQNPTPVEN 234
LHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQPVQNPTPVEN
Sbjct: 181 LHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQPVQNPTPVEN 234
>gi|13376439 ubiquitin domain containing 1 [Homo sapiens]
Length = 227
Score = 308 bits (788), Expect = 3e-84
Identities = 146/225 (64%), Positives = 179/225 (79%), Gaps = 3/225 (1%)
Query: 1 MGGCVGAQHDSSGSLNENSEGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDT 60
MG CVG Q + + GRN+PLKKE+ KWKSDYPMTDGQLRSKRDEFWDT
Sbjct: 1 MGNCVGRQRRERPAAPGHPRKRA---GRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDT 57
Query: 61 APAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPV 120
APAFEGRKEIWDALKAAA+A E+NDHELAQAI+DGA+ITLPHG L ECYDELGNRYQLP+
Sbjct: 58 APAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPI 117
Query: 121 YCLAPPINMIEEKSDIETLDIPEPPPNSGYECQLRLRLSTGKDLKLVVRSTDTVFHMKRR 180
YCL+PP+N++ E ++ E+L+ PEPPP+ E L++RLSTGKD++L DTV +KR+
Sbjct: 118 YCLSPPVNLLLEHTEEESLEPPEPPPSVRREFPLKVRLSTGKDVRLSASLPDTVGQLKRQ 177
Query: 181 LHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVVQVIVSQP 225
LHA EG+EP QRWFFSG+ LTD+ + +E KI KD+V+QVI++QP
Sbjct: 178 LHAQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQP 222
>gi|11024714 ubiquitin B precursor [Homo sapiens]
Length = 229
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 62 QKESTLHLVL 71
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 78 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 138 QKESTLHLVL 147
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 154 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 214 QKESTLHLVL 223
>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 62 QKESTLHLVL 71
>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 62 QKESTLHLVL 71
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 62 QKESTLHLVL 71
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 78 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 138 QKESTLHLVL 147
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 230 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 290 QKESTLHLVL 299
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 306 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 366 QKESTLHLVL 375
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 382 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 442 QKESTLHLVL 451
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 458 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 518 QKESTLHLVL 527
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 534 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 594 QKESTLHLVL 603
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 610 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 670 QKESTLHLVL 679
Score = 42.0 bits (97), Expect = 5e-04
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ QR F+G+ L D + I
Sbjct: 154 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNI 213
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 214 QKESTLHLVL 223
>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 62 QKESTLHLVL 71
>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 45.1 bits (105), Expect = 5e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 153 QLRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKI 212
Q+ ++ TGK + L V +DT+ ++K ++ EG+ P QR F+G+ L D + I
Sbjct: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 213 PKDYVVQVIV 222
K+ + +++
Sbjct: 62 QKESTLHLVL 71
>gi|5453760 neural precursor cell expressed, developmentally
down-regulated 8 [Homo sapiens]
Length = 81
Score = 44.7 bits (104), Expect = 7e-05
Identities = 19/70 (27%), Positives = 41/70 (58%)
Query: 154 LRLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIP 213
++++ TGK++++ + TD V +K R+ EG+ P QR +SG+ + D+ + KI
Sbjct: 3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIL 62
Query: 214 KDYVVQVIVS 223
V+ ++++
Sbjct: 63 GGSVLHLVLA 72
>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 144 PPPNSGYECQLRLRLST--GKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPL 201
P P S +L++ + T GK + L V +D + ++K ++ EG+ P QR F+G+ L
Sbjct: 59 PVPQSAAATKLQIFVKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQL 118
Query: 202 TDKMKFEELKIPKDYVVQVIV-------SQPVQNPTPVEN 234
D + I K+ + +++ + PTP +N
Sbjct: 119 EDGRTLSDCNIQKEPTLHLLLRLCGVAKKRKKSYPTPKKN 158
>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 144 PPPNSGYECQLRLRLST--GKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPL 201
P P S +L++ + T GK + L V +D + ++K ++ EG+ P QR F+G+ L
Sbjct: 59 PVPQSAAATKLQIFVKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQL 118
Query: 202 TDKMKFEELKIPKDYVVQVIV-------SQPVQNPTPVEN 234
D + I K+ + +++ + PTP +N
Sbjct: 119 EDGRTLSDCNIQKEPTLHLLLRLCGVAKKRKKSYPTPKKN 158
>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 144 PPPNSGYECQLRLRLST--GKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPL 201
P P S +L++ + T GK + L V +D + ++K ++ EG+ P QR F+G+ L
Sbjct: 59 PVPQSAAATKLQIFVKTLRGKTITLEVEPSDAIENVKAKIQDKEGIPPDQQRLIFAGKQL 118
Query: 202 TDKMKFEELKIPKDYVVQVIV-------SQPVQNPTPVEN 234
D + I K+ + +++ + PTP +N
Sbjct: 119 EDGRTLSDCNIQKEPTLHLLLRLCGVAKKRKKSYPTPKKN 158
>gi|27894376 cell adhesion molecule with homology to L1CAM precursor
[Homo sapiens]
Length = 1224
Score = 35.4 bits (80), Expect = 0.042
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 80 AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLA--PPINMIEEKSDIE 137
AFE N E + IIDGAN+T+ + L + +YC + ++ + + +
Sbjct: 574 AFEINGTEDGRIIIDGANLTISNVTLED----------QGIYCCSAHTALDSAADITQVT 623
Query: 138 TLDIPEPPPN 147
LD+P+PP N
Sbjct: 624 VLDVPDPPEN 633
>gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens]
Length = 165
Score = 34.7 bits (78), Expect = 0.072
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 156 LRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEE 209
+R + G+ VR T TV H+K+++ EGV+ F G+PL D++ E
Sbjct: 86 VRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGE 139
>gi|166158925 endothelial cell growth factor 1 (platelet-derived)
precursor [Homo sapiens]
Length = 482
Score = 30.0 bits (66), Expect = 1.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 180 RLHAAEGVEPGSQRWFFSGRP------LTDKMKFEELKIPKDYVVQVIVSQPV 226
R+ AA+GV+PG R SG P L + EEL P D V+++ + P+
Sbjct: 345 RMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELVRALPL 397
>gi|4503445 endothelial cell growth factor 1 (platelet-derived)
precursor [Homo sapiens]
Length = 482
Score = 30.0 bits (66), Expect = 1.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 180 RLHAAEGVEPGSQRWFFSGRP------LTDKMKFEELKIPKDYVVQVIVSQPV 226
R+ AA+GV+PG R SG P L + EEL P D V+++ + P+
Sbjct: 345 RMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELVRALPL 397
>gi|166158922 endothelial cell growth factor 1 (platelet-derived)
precursor [Homo sapiens]
Length = 482
Score = 30.0 bits (66), Expect = 1.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 180 RLHAAEGVEPGSQRWFFSGRP------LTDKMKFEELKIPKDYVVQVIVSQPV 226
R+ AA+GV+PG R SG P L + EEL P D V+++ + P+
Sbjct: 345 RMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELVRALPL 397
>gi|18104993 protein tyrosine phosphatase, non-receptor type 6
isoform 3 [Homo sapiens]
Length = 624
Score = 29.3 bits (64), Expect = 3.0
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 18/71 (25%)
Query: 173 TVFHMKRRLHAAEGVEPGSQRWFFS--------------GRPLTDKMKFEELKIPKDYVV 218
T+ H+K L+ ++ P S+RW+ G P T ++ E L P D+V+
Sbjct: 92 TIIHLKYPLNCSD---PTSERWYHGHMSGGQAETLLQAKGEPWTFLVR-ESLSQPGDFVL 147
Query: 219 QVIVSQPVQNP 229
V+ QP P
Sbjct: 148 SVLSDQPKAGP 158
>gi|18104989 protein tyrosine phosphatase, non-receptor type 6
isoform 1 [Homo sapiens]
Length = 595
Score = 29.3 bits (64), Expect = 3.0
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 18/71 (25%)
Query: 173 TVFHMKRRLHAAEGVEPGSQRWFFS--------------GRPLTDKMKFEELKIPKDYVV 218
T+ H+K L+ ++ P S+RW+ G P T ++ E L P D+V+
Sbjct: 92 TIIHLKYPLNCSD---PTSERWYHGHMSGGQAETLLQAKGEPWTFLVR-ESLSQPGDFVL 147
Query: 219 QVIVSQPVQNP 229
V+ QP P
Sbjct: 148 SVLSDQPKAGP 158
>gi|18104991 protein tyrosine phosphatase, non-receptor type 6
isoform 2 [Homo sapiens]
Length = 597
Score = 29.3 bits (64), Expect = 3.0
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 18/71 (25%)
Query: 173 TVFHMKRRLHAAEGVEPGSQRWFFS--------------GRPLTDKMKFEELKIPKDYVV 218
T+ H+K L+ ++ P S+RW+ G P T ++ E L P D+V+
Sbjct: 94 TIIHLKYPLNCSD---PTSERWYHGHMSGGQAETLLQAKGEPWTFLVR-ESLSQPGDFVL 149
Query: 219 QVIVSQPVQNP 229
V+ QP P
Sbjct: 150 SVLSDQPKAGP 160
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 28.5 bits (62), Expect = 5.2
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 16/101 (15%)
Query: 26 LGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESND 85
L RN+ + E + + TD LR+K E W P+ E++ L+A F +
Sbjct: 449 LQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTPS----NELYKPLRAEGTNFRTVL 504
Query: 86 HELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPP 126
+ QA G + ECY +R + + C P
Sbjct: 505 DKAVQA----------DGQVKECYQ--SHRDTIVLLCKPEP 533
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 28.5 bits (62), Expect = 5.2
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 16/101 (15%)
Query: 26 LGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESND 85
L RN+ + E + + TD LR+K E W P+ E++ L+A F +
Sbjct: 444 LQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTPS----NELYKPLRAEGTNFRTVL 499
Query: 86 HELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPP 126
+ QA G + ECY +R + + C P
Sbjct: 500 DKAVQA----------DGQVKECYQ--SHRDTIVLLCKPEP 528
>gi|105990514 filamin B, beta (actin binding protein 278) [Homo
sapiens]
Length = 2602
Score = 28.5 bits (62), Expect = 5.2
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 62 PAFEGRKEIWDALKAAAHAFESNDHELAQAIIDG--ANITLPHGALTECY--DELGNRYQ 117
P EG+ D + A F + L Q D A+I P GA TEC+ D YQ
Sbjct: 1236 PGIEGK----DVFREATTDFTVDSRPLTQVGGDHIKAHIANPSGASTECFVTDNADGTYQ 1291
Query: 118 LPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYE------CQLRLRLSTGKDLKLVVRST 171
+ ++++E D D+ P PNS ++ CQ + G LK +
Sbjct: 1292 VEYTPFEKGLHVVEVTYD----DV--PIPNSPFKVAVTEGCQPSRVQAQGPGLKEAFTNK 1345
Query: 172 DTVFHMKRR 180
VF + R
Sbjct: 1346 PNVFTVVTR 1354
>gi|169206322 PREDICTED: similar to hCG30646 [Homo sapiens]
Length = 272
Score = 28.1 bits (61), Expect = 6.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 109 YDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPE 143
++ GNR +P YC + E + + T++IPE
Sbjct: 233 FEHSGNRNYMPFYCAINDLKSSETEIRVVTVEIPE 267
>gi|239750562 PREDICTED: similar to hCG30646 [Homo sapiens]
Length = 272
Score = 28.1 bits (61), Expect = 6.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 109 YDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPE 143
++ GNR +P YC + E + + T++IPE
Sbjct: 233 FEHSGNRNYMPFYCAINDLKSSETEIRVVTVEIPE 267
>gi|239744861 PREDICTED: similar to hCG30646 [Homo sapiens]
Length = 272
Score = 28.1 bits (61), Expect = 6.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 109 YDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPE 143
++ GNR +P YC + E + + T++IPE
Sbjct: 233 FEHSGNRNYMPFYCAINDLKSSETEIRVVTVEIPE 267
>gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens]
Length = 510
Score = 27.7 bits (60), Expect = 8.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 33 KKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFES-NDHELAQA 91
+KEK K++ ++ +L K++EF P +G + A FES D EL Q
Sbjct: 283 EKEKEKYQEEFEHFQQELDKKKEEFQKGHPDLQG--------QPAEEIFESVGDRELRQ- 333
Query: 92 IIDGAN 97
+ +G N
Sbjct: 334 VFEGQN 339
>gi|154275767 ADAMTS-like 1 isoform 4 precursor [Homo sapiens]
Length = 1762
Score = 27.7 bits (60), Expect = 8.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 107 ECYDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYE 151
ECYD NR YC P N I+ K ++ ++ P + GY+
Sbjct: 323 ECYDLRSNRVVADQYCHYYPEN-IKPKPKLQECNLDPCPASDGYK 366
>gi|154275765 ADAMTS-like 1 isoform 2 precursor [Homo sapiens]
Length = 525
Score = 27.7 bits (60), Expect = 8.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 107 ECYDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYE 151
ECYD NR YC P N I+ K ++ ++ P + GY+
Sbjct: 323 ECYDLRSNRVVADQYCHYYPEN-IKPKPKLQECNLDPCPASDGYK 366
>gi|40548415 dishevelled associated activator of morphogenesis 2
[Homo sapiens]
Length = 1067
Score = 27.7 bits (60), Expect = 8.9
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 103 GALTECYDELGNRYQLPVYCLAPPINMIEEKSDIETLDIPEPPPNSGYEC 152
G + E +L PV PP + S + T D+P PPP + C
Sbjct: 502 GQVAELVAQLSELSTGPVSSPPPPGGPLTLSSSMTTNDLPPPPPPLPFAC 551
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,506,664
Number of Sequences: 37866
Number of extensions: 495197
Number of successful extensions: 841
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 813
Number of HSP's gapped (non-prelim): 40
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.