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Search of human proteins with 109389358
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109389358 transcription factor AP-2 alpha isoform c [Homo
sapiens]
(433 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109389358 transcription factor AP-2 alpha isoform c [Homo sap... 890 0.0
gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens] 870 0.0
gi|73760407 transcription factor AP-2 alpha isoform b [Homo sapi... 867 0.0
gi|118582289 transcription factor AP-2 beta [Homo sapiens] 593 e-169
gi|4507445 transcription factor AP-2 gamma [Homo sapiens] 508 e-144
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 481 e-136
gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens] 353 2e-97
gi|124378039 SEC16 homolog A [Homo sapiens] 40 0.004
gi|47578107 delangin isoform B [Homo sapiens] 39 0.007
gi|47578105 delangin isoform A [Homo sapiens] 39 0.007
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 39 0.009
gi|21314684 single stranded DNA binding protein 3 isoform b [Hom... 39 0.012
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 38 0.016
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 38 0.016
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 38 0.020
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.027
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 37 0.027
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.027
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.027
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.027
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 37 0.035
gi|162951884 R3H domain containing 2 [Homo sapiens] 37 0.046
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 36 0.078
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 36 0.078
gi|238859557 regulatory factor X1 [Homo sapiens] 35 0.10
gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ... 35 0.10
gi|239757254 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 35 0.13
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 35 0.13
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 35 0.13
>gi|109389358 transcription factor AP-2 alpha isoform c [Homo
sapiens]
Length = 433
Score = 890 bits (2299), Expect = 0.0
Identities = 433/433 (100%), Positives = 433/433 (100%)
Query: 1 MSILAKMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQP 60
MSILAKMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQP
Sbjct: 1 MSILAKMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQP 60
Query: 61 IYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPR 120
IYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPR
Sbjct: 61 IYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPR 120
Query: 121 RDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSK 180
RDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSK
Sbjct: 121 RDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSK 180
Query: 181 SNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECL 240
SNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECL
Sbjct: 181 SNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECL 240
Query: 241 NASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDF 300
NASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDF
Sbjct: 241 NASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDF 300
Query: 301 GYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRP 360
GYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRP
Sbjct: 301 GYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRP 360
Query: 361 NPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDN 420
NPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDN
Sbjct: 361 NPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDN 420
Query: 421 NAKSSDKEEKHRK 433
NAKSSDKEEKHRK
Sbjct: 421 NAKSSDKEEKHRK 433
>gi|4507441 transcription factor AP-2 alpha isoform a [Homo sapiens]
Length = 437
Score = 870 bits (2248), Expect = 0.0
Identities = 424/428 (99%), Positives = 425/428 (99%)
Query: 6 KMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQS 65
K D +DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQS
Sbjct: 10 KYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQS 69
Query: 66 QDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRR 125
QDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRR
Sbjct: 70 QDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRR 129
Query: 126 HEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNA 185
HEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNA
Sbjct: 130 HEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNA 189
Query: 186 VSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL 245
VSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL
Sbjct: 190 VSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL 249
Query: 246 GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE 305
GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE
Sbjct: 250 GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE 309
Query: 306 TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE 365
TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE
Sbjct: 310 TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE 369
Query: 366 PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS 425
PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS
Sbjct: 370 PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS 429
Query: 426 DKEEKHRK 433
DKEEKHRK
Sbjct: 430 DKEEKHRK 437
>gi|73760407 transcription factor AP-2 alpha isoform b [Homo
sapiens]
Length = 431
Score = 867 bits (2240), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 12 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 71
DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH
Sbjct: 10 DRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSH 69
Query: 72 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 131
VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH
Sbjct: 70 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 129
Query: 132 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 191
GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI
Sbjct: 130 GPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPI 189
Query: 192 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 251
NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR
Sbjct: 190 NKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRR 249
Query: 252 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 311
AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK
Sbjct: 250 AKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAK 309
Query: 312 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 371
AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC
Sbjct: 310 AVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSC 369
Query: 372 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 431
LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH
Sbjct: 370 LTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKH 429
Query: 432 RK 433
RK
Sbjct: 430 RK 431
>gi|118582289 transcription factor AP-2 beta [Homo sapiens]
Length = 460
Score = 593 bits (1529), Expect = e-169
Identities = 318/444 (71%), Positives = 365/444 (82%), Gaps = 29/444 (6%)
Query: 10 WQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPI-YPQSQDP 68
++DRHDG + ++RL QLG+V Q PY+SAPPLSHTP++DFQPPYFPPPYQP+ Y QSQDP
Sbjct: 26 YEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDP 85
Query: 69 YSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESG-----LLHTHRGLPHQLSGLDPRRDY 123
YSHVNDPYSLNPLH QPQ QHP W GQRQ QE G LL R QLSGLDPRRDY
Sbjct: 86 YSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDY 141
Query: 124 ---RRHEDLLHGPH-ALSSGLGD-LSIHSLPH-AIEEVPHVEDP---GINIPDQTVIKKG 174
RR + LLH H L +G+GD LS+H L H +E+V VED G+N+ DQ+VIKK
Sbjct: 142 HSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKV 201
Query: 175 PVSLSKSNSNAVSAIPINKDNLFGGV-VNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRR 233
PV +V+++ +NKD GG+ VN EVFCSVPGRLSLLSSTSKYKVTV EVQRR
Sbjct: 202 PVP-----PKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRR 256
Query: 234 LSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEA 293
LSPPECLNASLLGGVLRRAKSKNGGRSLRE+L+KIGLNLPAGRRKAANVTLLTSLVEGEA
Sbjct: 257 LSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEA 316
Query: 294 VHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRS 353
VHLARDFGY+CETEFPAKAV+E+LNRQH+DP++ +RKNMLLATKQ+CKEFTDLLAQDR+
Sbjct: 317 VHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRT 376
Query: 354 PLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSN- 412
P+GNSRP+PILEPGIQSCLTHF+LI+HGFG+PA+CAA+TALQNYLTEALK MDKM+L+N
Sbjct: 377 PIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNT 436
Query: 413 NPNSHTDN---NAKSSDKEEKHRK 433
N HT +K+ DKEEKHRK
Sbjct: 437 TTNRHTSGEGPGSKTGDKEEKHRK 460
>gi|4507445 transcription factor AP-2 gamma [Homo sapiens]
Length = 450
Score = 508 bits (1309), Expect = e-144
Identities = 282/446 (63%), Positives = 338/446 (75%), Gaps = 30/446 (6%)
Query: 9 DWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPP-YFPPPYQPI-YPQSQ 66
D +DRHDG+SNG R+P L + GQ Y+ APPLSHT A++QPP YFPPPYQ + Y QS
Sbjct: 14 DCEDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYSQSA 73
Query: 67 DPYSHVNDPYS--LNPLHAQPQP---QHPGWPGQRQSQESGLLHTHRG-----LPHQLSG 116
DPYSH+ + Y+ +NPLH QP P Q WPG RQSQE L +H G LPH LSG
Sbjct: 74 DPYSHLGEAYAAAINPLH-QPAPTGSQQQAWPG-RQSQEGAGLPSHHGRPAGLLPH-LSG 130
Query: 117 LDP-----RRD-YRRHEDLLHGPHAL-SSGLGD-LSIHSLPHAIEEVPHVEDPGINIPDQ 168
L+ RRD YRR + LL HAL ++GL + L +H +PH ++EV +V+D + + DQ
Sbjct: 131 LEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQNVDDQHLLLHDQ 190
Query: 169 TVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVA 228
TVI+KGP+S++K+ N +P K+ L G V+NP EVFCSVPGRLSLLSSTSKYKVTVA
Sbjct: 191 TVIRKGPISMTKNPLN----LPCQKE-LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVA 245
Query: 229 EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSL 288
EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAA+VTLLTSL
Sbjct: 246 EVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSL 305
Query: 289 VEGEAVHLARDFGYVCETEFPAKAVAEFLNRQH-SDPNEQVTRKNMLLATKQICKEFTDL 347
VEGEAVHLARDF YVCE EFP+K VAE+L R H NE RKNMLLA +Q+CKEFT+L
Sbjct: 306 VEGEAVHLARDFAYVCEAEFPSKPVAEYLTRPHLGGRNEMAARKNMLLAAQQLCKEFTEL 365
Query: 348 LAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDK 407
L+QDR+P G SR P+LE IQ+CL+HF+LI+HGFGS A+CAAV+ALQNY+ EAL +DK
Sbjct: 366 LSQDRTPHGTSRLAPVLETNIQNCLSHFSLITHGFGSQAICAAVSALQNYIKEALIVIDK 425
Query: 408 MYLSNNPNSHTDNNAKSSDKEEKHRK 433
Y++ S D+N K+ +K EKHRK
Sbjct: 426 SYMNPGDQSPADSN-KTLEKMEKHRK 450
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 481 bits (1238), Expect = e-136
Identities = 272/440 (61%), Positives = 321/440 (72%), Gaps = 35/440 (7%)
Query: 16 GTSNGTARLPQLGTVGQSPYTSAPPLSHTPNA----DFQPPYFPPPY-QPIYPQSQDP-- 68
G + G ARL L Q+ Y APPL HTP A +FQPPYFPPPY QP P Q P
Sbjct: 16 GAAAGGARLSSLP---QAAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQAPDA 72
Query: 69 ---YSHV-NDPYS-LNPLHAQPQPQHPGWPGQRQSQES-----GLLHTHRGLPHQLSGLD 118
+ H+ DPY L PL AQPQP W R + + GLL P + GLD
Sbjct: 73 AAAFPHLAGDPYGGLAPL-AQPQPPQAAWAAPRAAARAHEEPPGLLAP----PARALGLD 127
Query: 119 PRRDYRRHED-LLHGPHALSSGLGD--LSIHSLPHA--IEEVPHVEDPGINIPDQTVIKK 173
PRRDY LLHG + GL D L + L A +E++ +++PG+++ DQ+VIKK
Sbjct: 128 PRRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLLDQSVIKK 187
Query: 174 GPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRR 233
P+ S ++++SA+ + KD+L GG+ NP EVFCSVPGRLSLLSSTSKYKVTV EVQRR
Sbjct: 188 VPIP---SKASSLSALSLAKDSLVGGITNPGEVFCSVPGRLSLLSSTSKYKVTVGEVQRR 244
Query: 234 LSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEA 293
LSPPECLNASLLGGVLRRAKSKNGGR LRE+L+KIGLNLPAGRRKAANVTLLTSLVEGEA
Sbjct: 245 LSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEA 304
Query: 294 VHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRS 353
VHLARDFGYVCETEFPAKA AE+L RQH+DP E +RK+MLLA KQICKEF DL+AQDRS
Sbjct: 305 VHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRKSMLLAAKQICKEFADLMAQDRS 364
Query: 354 PLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNN 413
PLGNSRP ILEPG+QSCLTHF+LI+HGFG PA+CAA+TA QNYL E+LK +DKM+LS+
Sbjct: 365 PLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAALTAFQNYLLESLKGLDKMFLSSV 424
Query: 414 PNSHTDNNAKSSDKEEKHRK 433
+ H K+S+K+ KHRK
Sbjct: 425 GSGH--GETKASEKDAKHRK 442
>gi|151301211 transcription factor AP-2 beta-like 1 [Homo sapiens]
Length = 452
Score = 353 bits (906), Expect = 2e-97
Identities = 227/461 (49%), Positives = 278/461 (60%), Gaps = 70/461 (15%)
Query: 9 DWQDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPPYFPPPYQ--P 60
D + RHDG+++ RL QLG +V S Y+S+ PL++ T +F PYF +Q P
Sbjct: 11 DAEIRHDGSNS--YRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTP 68
Query: 61 IYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQ---------------- 95
++ QS + +SH D YSLN LH Q H G P
Sbjct: 69 LHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNARALKSSCLD 128
Query: 96 RQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED--LLHGPHALSSGLGDLSIHSLPHAIE 153
Q +E G L +R H LS + Y H D LL GP S GL L ++E
Sbjct: 129 EQRRELGCLDAYRR--HDLSLMSHGSQYGMHPDQRLLPGP---SLGLAAAGADDLQGSVE 183
Query: 154 EVPHVEDPGINIPDQT-VIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPG 212
G+ + Q VI++G VVNP ++FCSVPG
Sbjct: 184 A-----QCGLVLNGQGGVIRRGGTC----------------------VVNPTDLFCSVPG 216
Query: 213 RLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNL 272
RLSLLSSTSKYKVT+AEV+RRLSPPECLNASLLGG+LRRAKSKNGGR LREKLD++GLNL
Sbjct: 217 RLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNL 276
Query: 273 PAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKN 332
PAGRRKAANVTLLTSLVEGEA+HLARDFGY CETEFPAKAV E L RQH + EQ RK
Sbjct: 277 PAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKK 336
Query: 333 MLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVT 392
M+LATKQICKEF DLL+QDRSPLG+SRP PIL+ IQ LTHF+LI+HGFG+PA+CAA++
Sbjct: 337 MILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALS 396
Query: 393 ALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK 433
Q L+E L ++K N + ++ ++ RK
Sbjct: 397 TFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRK 437
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 40.0 bits (92), Expect = 0.004
Identities = 42/154 (27%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 30 VGQSPYTSAPPLSHTPNADF-QPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQP--- 85
+G S +S P L A F Q P P+ SQ P + P + HA P
Sbjct: 67 LGSSSKSSPPVLQGPAPAGFSQHPGLLVPHTHARDSSQGPCEPLPGPLTQPRAHASPFSG 126
Query: 86 --QPQHPGWPGQRQSQESGL-----LHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSS 138
P P P +S E G + T LPH + G+DP + H PH
Sbjct: 127 ALTPSAPPGPEMNRSAEVGPSSEPEVQTLPYLPHYIPGVDPETSHGGH------PHGNMP 180
Query: 139 GLGDLSIHSLPH----AIEEVPHVEDPGINIPDQ 168
GL PH P + PG+ +P Q
Sbjct: 181 GLDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQ 214
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 41 LSHTPNADFQPPY--------------FPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQ 86
+SH+P++ F PP P PY P P PYSH + Y+ +P Q
Sbjct: 147 ISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQSPAGYMPYSHPSS-YTTHPQMQQAS 205
Query: 87 PQHPGWPGQRQSQESGLLHTH-RGLPHQLSG--LDPRRDYRRH---EDLLHGPHALSSGL 140
P G GL + H + LSG + D RH ED LH H LSS
Sbjct: 206 VSSPIVAG-------GLRNIHDNKVSGPLSGNSANHHADNPRHGSSEDYLHMVHRLSSDD 258
Query: 141 GDLS 144
GD S
Sbjct: 259 GDSS 262
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/124 (32%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 41 LSHTPNADFQPPY--------------FPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQ 86
+SH+P++ F PP P PY P P PYSH + Y+ +P Q
Sbjct: 147 ISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQSPAGYMPYSHPSS-YTTHPQMQQAS 205
Query: 87 PQHPGWPGQRQSQESGLLHTH-RGLPHQLSG--LDPRRDYRRH---EDLLHGPHALSSGL 140
P G GL + H + LSG + D RH ED LH H LSS
Sbjct: 206 VSSPIVAG-------GLRNIHDNKVSGPLSGNSANHHADNPRHGSSEDYLHMVHRLSSDD 258
Query: 141 GDLS 144
GD S
Sbjct: 259 GDSS 262
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 38.9 bits (89), Expect = 0.009
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 31 GQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPL--HAQPQPQ 88
G++P P S P +PPY P P +P P + PY P + P P
Sbjct: 289 GRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPP 348
Query: 89 HPGWPG 94
P WPG
Sbjct: 349 GPAWPG 354
Score = 28.9 bits (63), Expect = 9.5
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 15/73 (20%)
Query: 34 PYTSAP-----PLSH--TPNADF----QPPYFPPPYQPIYPQSQ-DPYSHVNDPYSLNPL 81
PY+ +P P +H P A F QP ++ P P YP +Q P YS +P
Sbjct: 206 PYSPSPSLPVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAG--YSWSPQ 263
Query: 82 HAQ-PQPQHPGWP 93
+ P+P +PG P
Sbjct: 264 RSMPPRPGYPGTP 276
>gi|21314684 single stranded DNA binding protein 3 isoform b [Homo
sapiens]
Length = 368
Score = 38.5 bits (88), Expect = 0.012
Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 22/170 (12%)
Query: 28 GTVGQSPYTSAPPLSHTPNADF----QPPYFPPPYQPIYPQSQDP---YSHVNDPYSLNP 80
G G P A P H P++ QPP P QP+ P S DP H N S+
Sbjct: 123 GPPGSQPSPHAQPPPHNPSSMMGPHSQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQR 182
Query: 81 LHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGL 140
++ P+ P PG Q+ SG+ L + G++ GP A
Sbjct: 183 MN-PPRGMGPMGPGP-QNYGSGMRPPPNSLGPAMPGIN------------MGPGAGRPWP 228
Query: 141 GDLSIHSLPHAIEEV-PHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAI 189
S +S+P++ +V PG P T I P + S+ N + I
Sbjct: 229 NPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMI 278
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 32 QSPYTSAPPLSHTPNAD----------------FQPPYFPPPYQPIYPQSQDPY----SH 71
Q PY+ PP S TP+A QPPY P QP + QS PY S
Sbjct: 482 QPPYSQQPP-SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 72 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLS 115
P ++QPQ Q P Q Q L P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 21 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPY---SHVND 74
T ++P G G S Y TP + Q P+ P QP Y P SQ P+ S+
Sbjct: 448 TQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPH-PQQQQPPYSQQPPSQTPHAQPSYQQQ 503
Query: 75 PYSLNPLHAQPQPQHPGWPGQRQSQES 101
P S P QP + P Q Q+S
Sbjct: 504 PQSQPPQLQSSQPPYSQQPSQPPHQQS 530
Score = 29.6 bits (65), Expect = 5.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 9 DWQDRHDGT--SNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQ 66
D + H+G+ S+GT + P P PP++ P +++QP PP Q PQ
Sbjct: 1536 DQRANHEGSWPSHGTRQPPY------GPSAPVPPMTRPPPSNYQP---PPSMQNHIPQVS 1586
Query: 67 DP 68
P
Sbjct: 1587 SP 1588
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 21/104 (20%)
Query: 32 QSPYTSAPPLSHTPNAD----------------FQPPYFPPPYQPIYPQSQDPY----SH 71
Q PY+ PP S TP+A QPPY P QP + QS PY S
Sbjct: 482 QPPYSQQPP-SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540
Query: 72 VNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLS 115
P ++QPQ Q P Q Q L P S
Sbjct: 541 TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 21 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPY---SHVND 74
T ++P G G S Y TP + Q P+ P QP Y P SQ P+ S+
Sbjct: 448 TQQIPPYGQQGPSGYGQQ---GQTPYYNQQSPH-PQQQQPPYSQQPPSQTPHAQPSYQQQ 503
Query: 75 PYSLNPLHAQPQPQHPGWPGQRQSQES 101
P S P QP + P Q Q+S
Sbjct: 504 PQSQPPQLQSSQPPYSQQPSQPPHQQS 530
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.7 bits (86), Expect = 0.020
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 19/73 (26%)
Query: 25 PQLGTVGQSPYTSAP-------PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYS 77
PQ + QSP T P P TP PY PP +P QS+DP++
Sbjct: 2415 PQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP---QSRDPFA------- 2464
Query: 78 LNPLHAQPQPQHP 90
PLH P+PQ P
Sbjct: 2465 --PLHKPPRPQPP 2475
Score = 31.6 bits (70), Expect = 1.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 34 PYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWP 93
P APP + + P + PP P PQ S + P S P AQ P HPG P
Sbjct: 4287 PRLPAPPGALSTGPVLGPVHPTPP--PSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTP 4344
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 52 PYFPPPYQPIYPQSQDPYSHVN--------DPYSLNPLHAQPQPQHP 90
P PPP Q + P P SH + DPY+ PL +PQP P
Sbjct: 2349 PQEPPPAQALAPS---PPSHPDIFRPGSYTDPYAQPPLTPRPQPPPP 2392
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 25 PQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPY-QPIYPQSQDPYSHVNDPYSLNPLHA 83
P + Q PY AP QPP+ P PY QP YP PY P P
Sbjct: 27 PPMPPYAQPPYPGAPYP--------QPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGG 78
Query: 84 QPQPQHP--GWP 93
PQ +P G+P
Sbjct: 79 YPQGPYPQEGYP 90
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 37.4 bits (85), Expect = 0.027
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 25 PQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPY-QPIYPQSQDPYSHVNDPYSLNPLHA 83
P + Q PY AP QPP+ P PY QP YP PY P P
Sbjct: 27 PPMPPYAQPPYPGAPYP--------QPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGG 78
Query: 84 QPQPQHP--GWP 93
PQ +P G+P
Sbjct: 79 YPQGPYPQEGYP 90
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 25 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 70
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 205 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 264
Query: 71 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 119
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 265 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 322
Query: 120 R 120
+
Sbjct: 323 Q 323
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 36 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 86
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 423 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 480
Query: 87 PQHPGWPG 94
QHP PG
Sbjct: 481 AQHPFVPG 488
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 25 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 70
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 818
Query: 71 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 119
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 876
Query: 120 R 120
+
Sbjct: 877 Q 877
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 36 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 86
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 1034
Query: 87 PQHPGWPG 94
QHP PG
Sbjct: 1035 AQHPFVPG 1042
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.027
Identities = 39/121 (32%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 25 PQLGTVGQSPYTSAPPLSHTPNADFQP-----PYFPPPY---------QPIYPQSQDPYS 70
PQL T G +P +A P +P A P P P P+ P P S P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPP 818
Query: 71 HVNDPYSLNPL-----------HAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDP 119
H + L PL HAQP P H P S ++G L H G P Q GL P
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQP-PLHGQGPPGPHSLQAGPLLQHPG-PPQPFGLPP 876
Query: 120 R 120
+
Sbjct: 877 Q 877
Score = 30.8 bits (68), Expect = 2.5
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 36 TSAPPLSHTPNADFQPPYFPPPYQPIYP----QSQD----PYSHVNDPYSLNPLHAQPQ- 86
T PP +H P P P P P P QSQ+ P SH P L+ + QP
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASH--PPTGLHQVAPQPPF 1034
Query: 87 PQHPGWPG 94
QHP PG
Sbjct: 1035 AQHPFVPG 1042
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 37.0 bits (84), Expect = 0.035
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 17/111 (15%)
Query: 32 QSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVND-----------PYSLNP 80
Q P + PP H N F P + + P +P + PY H D P +P
Sbjct: 531 QHPQFNQPPHPHNFNR-FPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHP 589
Query: 81 LHAQPQP---QHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHED 128
H P P +HP W G + H G P + P + H+D
Sbjct: 590 GHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGP--PHINHDD 638
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 36.6 bits (83), Expect = 0.046
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 27 LGTVGQSPYTSAPPLSHT--PNADFQPP------YFPPPYQPIYPQSQDPYSHVNDPYSL 78
L T S + APP P QPP Y+PP YP S Y ++ P +
Sbjct: 486 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQ---YPNSNQQYRPLSHPVAY 542
Query: 79 NPLHAQ--PQP-QHPG----WPGQRQSQESGLL 104
+P Q PQP Q PG P Q+Q+ G++
Sbjct: 543 SPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMI 575
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 35.8 bits (81), Expect = 0.078
Identities = 28/87 (32%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 33 SPYTSAPPLSHTPNADFQPP-YFPPPYQPIYPQS-----QDPYSHVNDPYSLNPLHAQPQ 86
S + PP PP PPP QP PQ P H +DPYS L P
Sbjct: 1005 STHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPS 1064
Query: 87 PQHPGWPGQRQSQESGLLHTHRGLPHQ 113
P P Q Q TH+ P Q
Sbjct: 1065 PLMIHSPQMSQFQSL----THQSPPQQ 1087
Score = 33.9 bits (76), Expect = 0.30
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 20 GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPP-PYQPIYPQ--SQDPYSHVNDPY 76
GTA+ P + TV + S PP + TP + P P P+ + P Q P V P
Sbjct: 187 GTAK-PGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQ 245
Query: 77 SL-NPLHAQPQPQHPGWPGQRQSQ 99
L P PQPQ P P + Q
Sbjct: 246 PLQTPPPVPPQPQPPPAPAPQPVQ 269
Score = 30.8 bits (68), Expect = 2.5
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 22/92 (23%)
Query: 21 TARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNP 80
T LP + Q P PP H P+ Q PPP P PQ H P P
Sbjct: 942 TPLLPSVKVQSQPP-PPLPPPPH-PSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP---RP 996
Query: 81 LHAQP----------------QPQHPGWPGQR 96
+H QP QP HP PGQ+
Sbjct: 997 VHLQPMQFSTHIQQPPPPQGQQPPHPP-PGQQ 1027
Score = 28.9 bits (63), Expect = 9.5
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 34 PYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPG 91
P PP P QPP PPP P PQ P + P + +PQ PG
Sbjct: 759 PPPQQPPPPPPPQQQQQPP--PPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPG 814
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 35.8 bits (81), Expect = 0.078
Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 13/95 (13%)
Query: 23 RLPQLGTVGQS--PYTSAPPLSHTPNADFQPPYFPPPYQPIY---PQSQDPYSHVNDPYS 77
R P L GQ P + P L + PP+ P P QP PQ Q P+ + P
Sbjct: 558 RQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQP-- 615
Query: 78 LNPLHAQPQPQH-PGWPGQRQSQESGLLHTHRGLP 111
P QP PQH P P Q Q H H +P
Sbjct: 616 --PPQHQPPPQHPPQHPPQHQHHHH---HHHLSVP 645
Score = 32.3 bits (72), Expect = 0.86
Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Query: 6 KMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNA-DFQPPYFP--PPYQPIY 62
K G + R G G +G + H P QPP P PP P
Sbjct: 267 KQGRYSSRRGGRRGGPLMCRGVGDQRRESTERGRMKDHRPALLPTQPPVVPQAPPPPPPP 326
Query: 63 PQSQDPYSHVNDPYSLNPLHAQPQPQHPGWP 93
PQ Q P + P L PL P HP P
Sbjct: 327 PQQQ-PIRSLFQPQPLQPLLPVQHPHHPSPP 356
Score = 29.6 bits (65), Expect = 5.6
Identities = 23/86 (26%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Query: 28 GTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQP 87
G VG ++ + P + P+ P P QP P P PLH P
Sbjct: 536 GPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQ-------GPLHPPLPP 588
Query: 88 QHPGWPGQRQSQESGLLHTHRGLPHQ 113
H P Q Q Q PHQ
Sbjct: 589 PHQPQPQQPQQQPPPQHQPPHQPPHQ 614
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 35.4 bits (80), Expect = 0.10
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 33 SPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGW 92
+P S PP + P A QPP PPP P PQ + Y QPQ Q PG
Sbjct: 12 APPPSQPPQA-PPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPG- 69
Query: 93 PGQRQ 97
GQ+Q
Sbjct: 70 -GQKQ 73
>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
sapiens]
Length = 279
Score = 35.4 bits (80), Expect = 0.10
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 20 GTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLN 79
GT RL L V ++ ++P P +P P P D + + P S
Sbjct: 11 GTDRLGILQWVDEAQMAASPL-----------PMYPGPT----PLPGDDHETQHPPSSSR 55
Query: 80 PLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLH 131
PL + QHP P +ESG+L GLP + SGL R + E + H
Sbjct: 56 PLSWPQKAQHPMGP-----EESGVLEPLVGLPRRRSGLVSRAGHSDAEPIPH 102
>gi|239757254 PREDICTED: hypothetical protein [Homo sapiens]
Length = 247
Score = 35.0 bits (79), Expect = 0.13
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 40 PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQ 99
P SH P A+ P P+ + +Q P S ++ PY + P+P+ P +
Sbjct: 52 PDSHFPPANSSSQVAPLPF--LLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGR 109
Query: 100 ESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLG 141
S H+H Q+S PRR H PH SGLG
Sbjct: 110 ASAHAHSHADDASQVS---PRRVPAVHRLRAPSPHPGVSGLG 148
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 40 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 86
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 29 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 88
Query: 87 PQHPGW 92
P P W
Sbjct: 89 PLRPPW 94
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 40 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 86
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
Query: 87 PQHPGW 92
P P W
Sbjct: 107 PLRPPW 112
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 40 PLSHTPNADFQPPYFPPPYQ------PIYPQSQDPY-------SHVNDPYSLNPLHAQPQ 86
PLSHTP+A PP PPP P +P +Q P S A+P+
Sbjct: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
Query: 87 PQHPGW 92
P P W
Sbjct: 107 PLRPPW 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,585,772
Number of Sequences: 37866
Number of extensions: 1050682
Number of successful extensions: 3758
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 3308
Number of HSP's gapped (non-prelim): 527
length of query: 433
length of database: 18,247,518
effective HSP length: 105
effective length of query: 328
effective length of database: 14,271,588
effective search space: 4681080864
effective search space used: 4681080864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.