Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MRPS26 Sequence: fasta or formatted (205aa) NCBI GI: 14269586
Description:

mitochondrial ribosomal protein S26

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         26           2
 C cysteine            0.5          1           1
 D aspartate           2.4          5           1
 E glutamate          12.7         26           2
 F phenylalanine       2.0          4           2
 G glycine             2.4          5           1
 H histidine           2.4          5           1
 I isoleucine          2.0          4           1
 K lysine              4.9         10           1
 L leucine             9.8         20           1
 M methionine          2.4          5           1
 N asparagine          3.4          7           1
 P proline             4.4          9           2
 Q glutamine           6.8         14           1
 R arginine           16.1         33           2
 S serine              2.4          5           1
 T threonine           2.4          5           1
 V valine              7.3         15           2
 W tryptophan          1.5          3           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein S26 
EIF3A                 0.069   eukaryotic translation initiation factor 3, subunit 1...
GIGYF2                0.055   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.055   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.055   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.055   GRB10 interacting GYF protein 2 isoform b 
PLEC1                 0.055   plectin 1 isoform 11 
PLEC1                 0.055   plectin 1 isoform 10 
PLEC1                 0.055   plectin 1 isoform 8 
PLEC1                 0.055   plectin 1 isoform 7 
PLEC1                 0.055   plectin 1 isoform 6 
PLEC1                 0.055   plectin 1 isoform 3 
PLEC1                 0.055   plectin 1 isoform 2 
PLEC1                 0.055   plectin 1 isoform 1 
DNAJC2                0.055   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform...
CALD1                 0.053   caldesmon 1 isoform 1 
MYO10                 0.050   myosin X 
MAP4K4                0.047   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.047   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.047   mitogen-activated protein kinase kinase kinase kinas...
INCENP                0.047   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.047   inner centromere protein antigens 135/155kDa isofor...
TNIK                  0.047   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.047   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.047   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.047   TRAF2 and NCK interacting kinase isoform 3 
MAP7                  0.047   microtubule-associated protein 7 
CCDC11                0.047   coiled-coil domain containing 11 
LOC653125             0.045   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.045   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press