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Search of human proteins with 14249132
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14249132 brain expressed X-linked 2 [Homo sapiens]
(128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14249132 brain expressed X-linked 2 [Homo sapiens] 266 4e-72
gi|68533249 brain expressed, X-linked 1 [Homo sapiens] 237 2e-63
gi|228008288 brain expressed, X-linked 5 [Homo sapiens] 74 4e-14
gi|61175244 brain expressed, X-linked 5 [Homo sapiens] 74 4e-14
gi|189095254 BEX family member 4 [Homo sapiens] 73 5e-14
gi|122937245 BEX family member 4 [Homo sapiens] 73 5e-14
gi|46094060 nerve growth factor receptor (TNFRSF16) associated p... 70 6e-13
gi|7657044 nerve growth factor receptor (TNFRSF16) associated pr... 70 6e-13
gi|46094062 nerve growth factor receptor (TNFRSF16) associated p... 62 9e-11
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 33 0.046
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 33 0.046
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 30 0.67
gi|23397409 transcription elongation factor A (SII)-like 7 [Homo... 30 0.67
gi|6005757 chromatin-specific transcription elongation factor la... 29 0.88
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 29 0.88
gi|167614502 protein phosphatase 1, regulatory (inhibitor) subun... 29 0.88
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 29 1.1
gi|81295809 pericentrin [Homo sapiens] 29 1.1
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 28 1.5
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 28 1.5
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 28 2.0
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 28 2.0
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 28 2.0
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 28 2.6
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 28 2.6
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 28 2.6
gi|148746195 trichohyalin [Homo sapiens] 28 2.6
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi... 28 2.6
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 28 2.6
gi|166197690 neuronal guanine nucleotide exchange factor isoform... 28 2.6
>gi|14249132 brain expressed X-linked 2 [Homo sapiens]
Length = 128
Score = 266 bits (679), Expect = 4e-72
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ
Sbjct: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
Query: 61 PILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH 120
PILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH
Sbjct: 61 PILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH 120
Query: 121 HDEFCLMP 128
HDEFCLMP
Sbjct: 121 HDEFCLMP 128
>gi|68533249 brain expressed, X-linked 1 [Homo sapiens]
Length = 125
Score = 237 bits (604), Expect = 2e-63
Identities = 114/128 (89%), Positives = 121/128 (94%), Gaps = 3/128 (2%)
Query: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
MESKE+RA+N+L +EN NQEN+EK EQVANKGEPLALPL+ EYCVPRGNRRRFRVRQ
Sbjct: 1 MESKEKRAVNSLSMENANQENEEK---EQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQ 57
Query: 61 PILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH 120
PILQYRWD+MHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH
Sbjct: 58 PILQYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDH 117
Query: 121 HDEFCLMP 128
HDEFCLMP
Sbjct: 118 HDEFCLMP 125
>gi|228008288 brain expressed, X-linked 5 [Homo sapiens]
Length = 111
Score = 73.6 bits (179), Expect = 4e-14
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 8/117 (6%)
Query: 14 VENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRL 73
+ENV +EN + EK V N+ A L EY P GN + P + D+ +RL
Sbjct: 1 MENVPKEN-KVVEKAPVQNE----APALGGGEYQEPGGNVKGVWA-PPAPGFGEDVPNRL 54
Query: 74 GEPQARMREE--NMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDEFCLMP 128
+ + + +MER EE+R+L K+RE QL +SLR + DPPHHDHHDEFCLMP
Sbjct: 55 VDNIDMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHHDEFCLMP 111
>gi|61175244 brain expressed, X-linked 5 [Homo sapiens]
Length = 111
Score = 73.6 bits (179), Expect = 4e-14
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 8/117 (6%)
Query: 14 VENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRL 73
+ENV +EN + EK V N+ A L EY P GN + P + D+ +RL
Sbjct: 1 MENVPKEN-KVVEKAPVQNE----APALGGGEYQEPGGNVKGVWA-PPAPGFGEDVPNRL 54
Query: 74 GEPQARMREE--NMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDEFCLMP 128
+ + + +MER EE+R+L K+RE QL +SLR + DPPHHDHHDEFCLMP
Sbjct: 55 VDNIDMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHHDEFCLMP 111
>gi|189095254 BEX family member 4 [Homo sapiens]
Length = 120
Score = 73.2 bits (178), Expect = 5e-14
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
MESKEE A NNL EN QEN + EQ + E + L E P GN RR RVR+
Sbjct: 1 MESKEELAANNLNGENAQQEN---EGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRR 57
Query: 61 PILQYRWDIMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHD 119
+ +RW I +R + +AR +++ER ++ ++ K RE+Q+ H +R + +P D
Sbjct: 58 LVPNFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---D 111
Query: 120 HHDEFCLMP 128
+H +FCL+P
Sbjct: 112 NHYDFCLIP 120
>gi|122937245 BEX family member 4 [Homo sapiens]
Length = 120
Score = 73.2 bits (178), Expect = 5e-14
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
MESKEE A NNL EN QEN + EQ + E + L E P GN RR RVR+
Sbjct: 1 MESKEELAANNLNGENAQQEN---EGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRR 57
Query: 61 PILQYRWDIMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHD 119
+ +RW I +R + +AR +++ER ++ ++ K RE+Q+ H +R + +P D
Sbjct: 58 LVPNFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---D 111
Query: 120 HHDEFCLMP 128
+H +FCL+P
Sbjct: 112 NHYDFCLIP 120
>gi|46094060 nerve growth factor receptor (TNFRSF16) associated
protein 1 isoform b [Homo sapiens]
Length = 111
Score = 69.7 bits (169), Expect = 6e-13
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 16 NVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLGE 75
N++QEN+E ++ Q + PL E P GNRR + R+ +RW I +R
Sbjct: 3 NIHQENEEMEQPMQNGEEDRPLG----GGEGHQPAGNRRG-QARRLAPNFRWAIPNRQIN 57
Query: 76 PQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHDEFCLMP 128
++ME EE+R++ KLRE QL + LR + + HHDHHDEFCLMP
Sbjct: 58 DGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 111
>gi|7657044 nerve growth factor receptor (TNFRSF16) associated
protein 1 isoform b [Homo sapiens]
Length = 111
Score = 69.7 bits (169), Expect = 6e-13
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 16 NVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLGE 75
N++QEN+E ++ Q + PL E P GNRR + R+ +RW I +R
Sbjct: 3 NIHQENEEMEQPMQNGEEDRPLG----GGEGHQPAGNRRG-QARRLAPNFRWAIPNRQIN 57
Query: 76 PQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHDEFCLMP 128
++ME EE+R++ KLRE QL + LR + + HHDHHDEFCLMP
Sbjct: 58 DGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 111
>gi|46094062 nerve growth factor receptor (TNFRSF16) associated
protein 1 isoform a [Homo sapiens]
Length = 101
Score = 62.4 bits (150), Expect = 9e-11
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 28 EQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLGEPQARMREENMER 87
EQ GE PL E P GNRR + R+ +RW I +R ++ME
Sbjct: 2 EQPMQNGEE-DRPLGGGEGHQPAGNRRG-QARRLAPNFRWAIPNRQINDGMGGDGDDMEI 59
Query: 88 IGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHDEFCLMP 128
EE+R++ KLRE QL + LR + + HHDHHDEFCLMP
Sbjct: 60 FMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 101
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 33.5 bits (75), Expect = 0.046
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 15 ENVNQENDEKDEKEQVANKGEPLALP---------------LNVSEYCVPRGNRRRFRVR 59
E ++E +E+DE+E A + L P +V +PRG RR R R
Sbjct: 641 EEEDEEEEEEDEEESKAGGEDQLWRPYYSYKPKRKAGAAGGASVGGSGLPRG-RRPPRWR 699
Query: 60 QPILQYRWDIMHRLGEPQARMREENMERIGE--EVRQLMEKLREKQLSH 106
Q + + W+ P R R E R G+ + + KLR+ Q +H
Sbjct: 700 QKLERRSWEETPAAESPAGRARTERRHRCGDCAQTFTTLRKLRKHQEAH 748
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 33.5 bits (75), Expect = 0.046
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 15 ENVNQENDEKDEKEQVANKGEPLALP---------------LNVSEYCVPRGNRRRFRVR 59
E ++E +E+DE+E A + L P +V +PRG RR R R
Sbjct: 641 EEEDEEEEEEDEEESKAGGEDQLWRPYYSYKPKRKAGAAGGASVGGSGLPRG-RRPPRWR 699
Query: 60 QPILQYRWDIMHRLGEPQARMREENMERIGE--EVRQLMEKLREKQLSH 106
Q + + W+ P R R E R G+ + + KLR+ Q +H
Sbjct: 700 QKLERRSWEETPAAESPAGRARTERRHRCGDCAQTFTTLRKLRKHQEAH 748
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 0.67
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 10 NNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRF---RVRQPILQ-- 64
N + E + ++N E EK ++A + E + LNV E + R +F +V+ LQ
Sbjct: 178 NTITNEELKKKNAELQEKLRLA-ESEKSEIQLNVKEL-KRKLERAKFLLPQVQTNTLQEE 235
Query: 65 -YRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
+R + R E + R +EE M R E +R+ K+RE++
Sbjct: 236 MWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQE 275
Score = 27.7 bits (60), Expect = 2.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 67 WDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
W+ RL E + RMRE+ EE Q E++RE++
Sbjct: 362 WEQDERLREKEERMREQEKMWEQEEKMQEEERIRERE 398
>gi|23397409 transcription elongation factor A (SII)-like 7 [Homo
sapiens]
Length = 100
Score = 29.6 bits (65), Expect = 0.67
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 51 GNRRRFRVRQPILQYRWDIMHRLGEPQARMRE-ENMERIGEEVRQLMEKLREKQLSH 106
GN R+ R+ Q + +++ DI +R + + RE + MER EE+R L +K R +H
Sbjct: 35 GNFRQ-RLLQSLEEFKEDIDYRHFKDEEMTREGDEMERCLEEIRGLRKKFRALHSNH 90
>gi|6005757 chromatin-specific transcription elongation factor large
subunit [Homo sapiens]
Length = 1047
Score = 29.3 bits (64), Expect = 0.88
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 15 ENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLG 74
E+ +E +EKDE E + +G AL + + +RR +
Sbjct: 435 EDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTAEEKRRAHQK--------------- 479
Query: 75 EPQARMREENMERIGEEV-RQLMEKLREKQLSHSLRAVSTDPPH 117
E A++ EE R+ E+ Q ++K R+ +S+ ++ PH
Sbjct: 480 ELAAQLNEEAKRRLTEQKGEQQIQKARKSNVSYKNPSLMPKEPH 523
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 29.3 bits (64), Expect = 0.88
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 50 RGNRRRFRVRQPILQYRWDIMHRLGEPQARMRE-ENMERIGEEVRQLMEKLREKQ 103
R + R ++ ++Q + + ++GE + +M+E E M R E++R+ EK+RE++
Sbjct: 533 REQEEKIREQEEMMQEQEE---KMGEQEEKMQEQEKMRRQEEKIREQEEKIREQK 584
Score = 28.5 bits (62), Expect = 1.5
Identities = 19/85 (22%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 19 QENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLGEPQA 78
+E +++ E+E++ + E + + + + R ++ + + + MH E +
Sbjct: 453 REEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQ-EEKI 511
Query: 79 RMREENMERIGEEVRQLMEKLREKQ 103
R +EE M R E++R+ EK+RE++
Sbjct: 512 REQEEKMWRQEEKIREQEEKIREQE 536
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 67 WDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 373 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 409
>gi|167614502 protein phosphatase 1, regulatory (inhibitor) subunit
3A [Homo sapiens]
Length = 1122
Score = 29.3 bits (64), Expect = 0.88
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 2 ESKEERALNNLIVENVNQENDEKDEKE 28
E KE+ +N V++VN+E+DE +EKE
Sbjct: 292 EDKEDLEASNRNVKDVNREHDEHNEKE 318
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 28.9 bits (63), Expect = 1.1
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 10 NNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRF---RVRQPILQ-- 64
N + E + ++N E EK +A + E + LNV E + R +F +V+ LQ
Sbjct: 216 NTITNEELKKKNAELQEKLPLA-ESEKSEIQLNVKEL-KRKLERAKFLLPQVQTNTLQEE 273
Query: 65 -YRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
+R + R E + R +EE M R E +R+ K+RE++
Sbjct: 274 MWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQE 313
Score = 26.2 bits (56), Expect = 7.4
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 19 QENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLGEPQA 78
QE +D++E++ + E L R R R ++ + W+ + ++ E +
Sbjct: 388 QEQKMRDQEERMWEQDERL------------REKEERMREQEKM----WEQVEKMREEKK 431
Query: 79 RMREENMERIGEEVRQLMEKLREKQ 103
+E R EE Q E++RE++
Sbjct: 432 MQEQEKKTRDQEEKMQEEERIRERE 456
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 28.9 bits (63), Expect = 1.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 73 LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDEFCL 126
L E AR +EE + R G+E +L EKL + ++ + + V T + + CL
Sbjct: 306 LREQHAREKEEVVLRCGQEAAELKEKL-QSEMEKNAQIVKTLKEDWESEKDLCL 358
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 28.5 bits (62), Expect = 1.5
Identities = 12/55 (21%), Positives = 30/55 (54%)
Query: 2 ESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRF 56
E +++++ + +DE++EKE++ K +P++LP ++ + R R+
Sbjct: 318 EEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERW 372
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 28.5 bits (62), Expect = 1.5
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 26 EKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMHRLGEPQARMREENM 85
EKEQ+ K L L + + + + +R+ + Q + D +RL E +EN
Sbjct: 1172 EKEQLQKK---LQEALTSRKAILKKAQEKERHLREELKQQK-DDYNRLQEQFDEQSKEN- 1226
Query: 86 ERIGEEVRQLMEKLRE 101
E IG+++RQL ++RE
Sbjct: 1227 ENIGDQLRQLQIQVRE 1242
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 67 WDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 387 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 423
Score = 26.6 bits (57), Expect = 5.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 75 EPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDE 123
E + R +EE M R E++R+ E RE++ H + + + D+
Sbjct: 523 EEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDK 571
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 67 WDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 340 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 376
Score = 26.9 bits (58), Expect = 4.4
Identities = 22/109 (20%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 1 MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60
M ++E + + QE + ++++E++ + E + + R + R ++
Sbjct: 405 MMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIR-----EQEKKIREQEEKIREQE 459
Query: 61 PILQYRWDIMH----RLGEPQARMRE--ENMERIGEEVRQLMEKLREKQ 103
++Q + + M ++ E +A+M+E E M R E++R+ +K+RE++
Sbjct: 460 EMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQE 508
Score = 26.2 bits (56), Expect = 7.4
Identities = 21/101 (20%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 15 ENVNQENDEKDEKEQVAN---KGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIMH 71
E + ++ +++ E+E++ + E A E R + R ++ ++Q + +
Sbjct: 357 EKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKI--REQEEKIREQEEMMQEQEE--- 411
Query: 72 RLGEPQARM---------REENMERIGEEVRQLMEKLREKQ 103
++GE + +M +EE M R E++R+ +K+RE++
Sbjct: 412 KMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQE 452
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 67 WDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
W+ ++ E + +M E+ R EE RQ EK+RE++
Sbjct: 434 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQE 470
Score = 26.2 bits (56), Expect = 7.4
Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 72 RLGEPQARM--REENMERIGEEVRQLMEKLREKQ 103
++GE + +M +EE M+ E++R+ EK+RE++
Sbjct: 614 KMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQE 647
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 27.7 bits (60), Expect = 2.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 5 EERALNNLIVENVNQENDEK--DEKEQVANKGEPLA---LPLNVSEYCVPRGNRRRFRVR 59
EE L NL+ NQ+ +EK ++E++ + E + L + E + R +
Sbjct: 283 EENELWNLL----NQQQEEKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQE 338
Query: 60 QPILQ-----YRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
+ I + +R + R E + R +EE M R E++R+ EK++E++
Sbjct: 339 EKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQE 387
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 27.7 bits (60), Expect = 2.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 5 EERALNNLIVENVNQENDEK--DEKEQVANKGEPLA---LPLNVSEYCVPRGNRRRFRVR 59
EE L NL+ NQ+ +EK ++E++ + E + L + E + R +
Sbjct: 283 EENELWNLL----NQQQEEKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQE 338
Query: 60 QPILQ-----YRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
+ I + +R + R E + R +EE M R E++R+ EK++E++
Sbjct: 339 EKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQE 387
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 27.7 bits (60), Expect = 2.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 73 LGEPQARMREE---NMERIGEEVRQLMEKLRE 101
LGE +A++ E N+ERI E+ QLM ++++
Sbjct: 689 LGELEAKLNENLRRNIERINNEIDQLMNQMQQ 720
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 27.7 bits (60), Expect = 2.6
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 54 RRFRVRQPILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSH 106
R+FR + +LQ R E Q R+E + EE QL + RE+QL H
Sbjct: 1619 RKFREDEQLLQER--------EEQQLHRQERDRKFLEEEPQLRRQEREQQLRH 1663
Score = 27.3 bits (59), Expect = 3.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 46 YCVPRGNRRRFRVRQPIL---QYRWDIMHRLGEPQARMREENMERIGEEVRQLMEK 98
YC R N + ++ L Q + D+ H LGE Q R RE+ R + R E+
Sbjct: 1241 YCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQERDREQERRRWQQRDRHFPEE 1296
Score = 26.9 bits (58), Expect = 4.4
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 2 ESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQP 61
+S+EE+ L + +E +EK +++ K L E R R + R+
Sbjct: 1313 KSQEEKQL-------LREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFREE 1365
Query: 62 ILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQL 104
L+++ L E Q R+E + +E +QL + RE+QL
Sbjct: 1366 ELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQL 1408
Score = 26.6 bits (57), Expect = 5.7
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 15 ENVNQENDE----KDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWDIM 70
E + QE +E + E+++ + EP L E + R+FR + +LQ
Sbjct: 1625 EQLLQEREEQQLHRQERDRKFLEEEP-QLRRQEREQQLRHDRDRKFREEEQLLQE----- 1678
Query: 71 HRLGEPQARMREENMERIGEEVRQLMEKLREKQ 103
GE Q R+E + EE +QL + RE++
Sbjct: 1679 ---GEEQQLRRQERDRKFREEEQQLRRQERERK 1708
Score = 26.2 bits (56), Expect = 7.4
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 22/101 (21%)
Query: 4 KEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPIL 63
+EE L L + + +E E+++++Q RR ++R+
Sbjct: 273 EEEEQLRKLERQELRRERQEEEQQQQRL---------------------RREQQLRRKQE 311
Query: 64 QYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQL 104
+ R + E Q R RE+ ER +++R+ E+ RE+QL
Sbjct: 312 EERREQQEERREQQER-REQQEERREQQLRREQEERREQQL 351
Score = 25.8 bits (55), Expect = 9.7
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 4 KEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPIL 63
+EE+ L E + E++ +EQ + E E + RR ++R+
Sbjct: 292 EEEQQQQRLRREQQLRRKQEEERREQQEERREQ-------QERREQQEERREQQLRREQE 344
Query: 64 QYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQL 104
+ R + R E + RE+ + R EE R+ + RE+QL
Sbjct: 345 ERREQQLRR--EQEEERREQQLRREQEEERREQQLRREQQL 383
>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 27.7 bits (60), Expect = 2.6
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 18 NQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRV----RQPILQYRWDIMHRL 73
++ +E+ E E + + E SE G + R + R+P+++ ++ R
Sbjct: 1624 SETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRK 1683
Query: 74 GEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHDE 123
EPQ +E ME EE E E++ + STDP D +E
Sbjct: 1684 EEPQEEQKEPKME---EE-----EHSEEEESGPAPVEESTDPEAQDIPEE 1725
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 27.7 bits (60), Expect = 2.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 70 MHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHS 107
+H+L E ++ E+ME + R L E+LR+K+L S
Sbjct: 1064 LHKL-EGNLKLNRESMENLESSQRHLAEELRKKELELS 1100
>gi|166197690 neuronal guanine nucleotide exchange factor isoform 2
[Homo sapiens]
Length = 618
Score = 27.7 bits (60), Expect = 2.6
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 15 ENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQPILQYRWD-IMHRL 73
E+ +E +E++E+E+ A+ E LP + C+ RF + Q + + R ++ L
Sbjct: 120 EDTPEEEEEEEEEEEPASPPERKTLP----QICLLSNPHSRFNLWQDLPEIRSSGVLEIL 175
Query: 74 GEPQARMREENMERIGEE----------VRQLMEKLREKQLSHSLRA 110
+ +++E E + E V ME R +++ H A
Sbjct: 176 QPEEIKLQEAMFELVTSEASYYKSLNLLVSHFMENERIRKILHPSEA 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,260,130
Number of Sequences: 37866
Number of extensions: 226632
Number of successful extensions: 1540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1351
Number of HSP's gapped (non-prelim): 189
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.