Guide to the Human Genome
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Name: TCEAL7 Sequence: fasta or formatted (100aa) NCBI GI: 23397409
Description:

transcription elongation factor A (SII)-like 7

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.0          1           1
 C cysteine            3.0          3           1
 D aspartate           5.0          5           1
 E glutamate          17.0         17           2
 F phenylalanine       5.0          5           1
 G glycine             5.0          5           1
 H histidine           4.0          4           1
 I isoleucine          3.0          3           1
 K lysine             10.0         10           2
 L leucine             6.0          6           2
 M methionine          3.0          3           1
 N asparagine          3.0          3           1
 P proline             6.0          6           1
 Q glutamine           5.0          5           2
 R arginine           14.0         14           1
 S serine              4.0          4           1
 T threonine           2.0          2           1
 V valine              1.0          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription elongation factor A (SII)-like 7 [Homo... 
TCEAL8                0.344   transcription elongation factor A (SII)-like 8 [Homo...
TCEAL8                0.344   transcription elongation factor A (SII)-like 8 [Homo...
WBP5                  0.233   WW domain binding protein 5 
WBP5                  0.233   WW domain binding protein 5 
WBP5                  0.233   WW domain binding protein 5 
WBP5                  0.233   WW domain binding protein 5 
TCEAL1                0.153   transcription elongation factor A (SII)-like 1 [Homo...
TCEAL1                0.153   transcription elongation factor A (SII)-like 1 [Homo...
TCEAL1                0.153   transcription elongation factor A (SII)-like 1 [Homo...
TCEAL6                0.106   transcription elongation factor A (SII)-like 6 [Hom...
TCEAL5                0.101   transcription elongation factor A (SII)-like 5 [Homo...
TCEAL3                0.095   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL2                0.095   transcription elongation factor A (SII)-like 2 [Homo...
TCEAL3                0.095   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL4                0.090   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.090   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.090   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.090   transcription elongation factor A (SII)-like 4 [Homo...
NGFRAP1               0.085   nerve growth factor receptor (TNFRSF16) associated p...
NGFRAP1               0.085   nerve growth factor receptor (TNFRSF16) associated p...
NGFRAP1               0.085   nerve growth factor receptor (TNFRSF16) associated pr...
BEX5                  0.079   brain expressed, X-linked 5 
BEX5                  0.079   brain expressed, X-linked 5 
BEX4                  0.074   BEX family member 4 
BEX4                  0.074   BEX family member 4 
BEGAIN                0.063   brain-enriched guanylate kinase-associated protein ...
BEGAIN                0.063   brain-enriched guanylate kinase-associated protein [...
LOC100133599          0.042   PREDICTED: hypothetical protein 
WDR87                 0.037   NYD-SP11 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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