Search of human proteins with 14195616

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
         (797 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14195616 protocadherin beta 9 precursor [Homo sapiens]            1575   0.0  
gi|9256602 protocadherin beta 10 precursor [Homo sapiens]            1422   0.0  
gi|11036656 protocadherin beta 7 precursor [Homo sapiens]            1181   0.0  
gi|9256608 protocadherin beta 14 precursor [Homo sapiens]            1177   0.0  
gi|9256614 protocadherin beta 3 precursor [Homo sapiens]             1169   0.0  
gi|9256610 protocadherin beta 15 precursor [Homo sapiens]            1166   0.0  
gi|9256612 protocadherin beta 2 precursor [Homo sapiens]             1160   0.0  
gi|14195605 protocadherin beta 16 precursor [Homo sapiens]           1153   0.0  
gi|11036654 protocadherin beta 13 precursor [Homo sapiens]           1143   0.0  
gi|9256616 protocadherin beta 4 precursor [Homo sapiens]             1142   0.0  
gi|9256604 protocadherin beta 11 precursor [Homo sapiens]            1137   0.0  
gi|9256606 protocadherin beta 12 precursor [Homo sapiens]            1137   0.0  
gi|9256618 protocadherin beta 6 precursor [Homo sapiens]             1135   0.0  
gi|11276081 protocadherin beta 8 precursor [Homo sapiens]            1133   0.0  
gi|7661662 protocadherin beta 5 precursor [Homo sapiens]             1130   0.0  
gi|14195607 protocadherin beta 1 precursor [Homo sapiens]             768   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...   651   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...   651   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...   649   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...   649   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...   649   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...   649   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...   647   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...   647   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...   647   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...   647   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...   643   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...   643   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...   641   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...   641   0.0  

>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
          Length = 797

 Score = 1575 bits (4077), Expect = 0.0
 Identities = 797/797 (100%), Positives = 797/797 (100%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA
Sbjct: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE
Sbjct: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI
Sbjct: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
           KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP
Sbjct: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE
Sbjct: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT
Sbjct: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
           SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780

Query: 781 KEIEENSTLPNSFGFNY 797
           KEIEENSTLPNSFGFNY
Sbjct: 781 KEIEENSTLPNSFGFNY 797


>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
          Length = 800

 Score = 1422 bits (3681), Expect = 0.0
 Identities = 724/798 (90%), Positives = 748/798 (93%), Gaps = 2/798 (0%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M  R   FPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA
Sbjct: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE
Sbjct: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           LRVRDINDH+PVF+ KE VLKISENTAEGTAFRLERAQDPD G N IQNYTIS NSFFHI
Sbjct: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
            ISG DEGMIYPELVLDKALDREEQ ELSLTLTALDGGSPSRSGTST+RIVVLDVNDNAP
Sbjct: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           QFAQALYETQAPENSP+G LIVKV A D DSGVNAEVSYSFFDASE+I TTFQINPFSGE
Sbjct: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           IFLRELLDYELVNSYKINIQAMDGGGLSARC VL++VLD+NDNPPELI+SS SNSVAENS
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           P   LAVFKI DRDSGENGK +CY+Q+NLPF LKPSV+NFYIL+TEGALDRE +AEYNIT
Sbjct: 361 PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LS EALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQ--ADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 718
           LLVDGFSQPYLPLPEAAPAQAQ  ADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 720

Query: 719 AASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHR 778
           AASVGRCSVPEGPFPGHLVDV G  TL QSYQYEVCLTGG  T EFKFLKP+   +    
Sbjct: 721 AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG 780

Query: 779 GGKEIEENSTLPNSFGFN 796
            G++ EENST  NSFGFN
Sbjct: 781 PGRKGEENSTFRNSFGFN 798


>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
          Length = 793

 Score = 1181 bits (3055), Expect = 0.0
 Identities = 600/786 (76%), Positives = 673/786 (85%), Gaps = 2/786 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
           ++RQVLFL +F G+S AG+   RY V EETE+G+F+ NLAKDLGL  GEL ARGTR+VSD
Sbjct: 10  QKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSD 69

Query: 70  DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
            N Q LLL S TG+LL NEKLDRE+LCGP+EPC+L FQ+L++ PFQI+RAEL VRDINDH
Sbjct: 70  QNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDH 129

Query: 130 SPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGM 189
           +PVF  +E+ LKI E+T  G AF LE AQD D G NS+ NYTIS N++FHI +  S EG 
Sbjct: 130 APVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGN 189

Query: 190 IYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYET 249
           IYPELVL++ LDREE  E SLTLTALDGGSP RSGT+ +RI+VLDVNDNAP F ++LY+ 
Sbjct: 190 IYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKV 249

Query: 250 QAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDY 309
           Q PENSPVGS++V VSA D D+G N E++Y+F  A+E IL TFQINP SG + L+  LDY
Sbjct: 250 QVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDY 309

Query: 310 ELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFK 369
           E + +Y + IQA DGGGLS +CTV++ V D NDN PEL++SSL++ +AENSP  V+AVF+
Sbjct: 310 EAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVFR 369

Query: 370 IKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTP 429
           I+DRDSG NGKT+C +QD++PF LKPSV+NFY L+TE  LDRE   EYNITITVTDLGTP
Sbjct: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429

Query: 430 RLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
           RLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQV YS
Sbjct: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489

Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRV 549
           LLP QDPHLPLASLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPALSSEALVRV
Sbjct: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549

Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
           LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609

Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
           TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669

Query: 670 YLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 729
           YL LPEAAP QA +  LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA VGRCSVPE
Sbjct: 670 YLRLPEAAPDQANS--LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSVPE 727

Query: 730 GPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENSTL 789
           GPFP HLVD+SGTGTL QSYQYEVCLTGGS T EFKFLKPI P+L P   G+E+EEN   
Sbjct: 728 GPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREVEENRPF 787

Query: 790 PNSFGF 795
            N+ GF
Sbjct: 788 QNNLGF 793


>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
          Length = 798

 Score = 1177 bits (3044), Expect = 0.0
 Identities = 594/796 (74%), Positives = 673/796 (84%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M+ RG    R+RQVL   +  G+S AG+    YSV EETE GSFV NLA+DLGL   EL+
Sbjct: 1   MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           +R  RVVSDDNK+YL LD  TGNLL NEKLDR++LCG  EPC+L+FQ+++++P Q +R E
Sbjct: 61  SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           L V+DINDHSP F  KE+++KISE T  G  F +E AQD D G NS+QNYTIS NS F+I
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
           KI  S +  IYPELVLD+ALD E++ EL LTLTA+DGGSP +SGT+ + I VLD+NDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +F Q+LYE Q PE+ P+GS I  +SA D D+G   ++SY+FF ASEDI  TF+INP SGE
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           + LR  LD+E++ SY INIQA DGGGLS +CT+L+KV+D NDNPPE+ ISS++  + EN+
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
              ++A+F I D+DSG+NG+ IC +QDNLPFFLKP+  NF+ L++E ALDRES+AEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTE++IT+ +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQV YSLLPPQD HLPLASLVSINADNGHLFALRSLDYEALQ F+FRVGA+DRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
           SVGRCSVPEGPFPGHLVDVSGTGTL QSYQYEVCLTGGS T EFKFLKPI P+   H  G
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780

Query: 781 KEIEENSTLPNSFGFN 796
           + + E     NSFG N
Sbjct: 781 RNMGEIENFRNSFGLN 796


>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
          Length = 796

 Score = 1169 bits (3024), Expect = 0.0
 Identities = 594/796 (74%), Positives = 670/796 (84%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M+  G  F RQRQVL LF+F G SLAGS   RYSV EE EKG  + NLAKDLGL   ELA
Sbjct: 1   MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           ARG +VVS  NKQ+  L   TG+LL NEKLDRE+LCGP EPC+L+FQIL+ +P Q    E
Sbjct: 61  ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           LR+ D+NDHSPVF   EM LKI E+T  GT   L  A+D D G NS+QNYTI+ NS FH+
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
                 +G  YPELVLDKALDREEQ ELSLTLTALDGGSP RSGT+ I I VLD+NDNAP
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +FAQ LYE    EN+PV S+IV VSA D D+G    +SY+FF ASE+I  TFQ+NP +G+
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           + L + L++E +NSY+++I+A DGGGLS + TV+++V+D NDNPPEL +SS+++ + ENS
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
              VLAVF + D DSG+NG+ +C +++NLPFFLKPSV+NFY L++EGALDRE+++EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           IT+TDLGTPRLKT+++IT+ VSDVNDNAPAFTQ SYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQVTYSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
           SVGRCSVPEGPFPG +VDVSGTGTL QSYQYEVCLTGGS T EFKFLKPI P+       
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAE 780

Query: 781 KEIEENSTLPNSFGFN 796
           +  E N +   SF F+
Sbjct: 781 RVSEANPSFRKSFEFS 796


>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
          Length = 787

 Score = 1166 bits (3017), Expect = 0.0
 Identities = 591/774 (76%), Positives = 662/774 (85%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M+  G  FP QRQVL L L   V+LAG    RYSV EETE+GSFV NLA DLGL  GELA
Sbjct: 1   MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
            RG RVVS+DN+Q L LD  TG L+ NEKLDREKLCGP EPC+++FQ+L+  P +++RAE
Sbjct: 61  ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           L V DINDHSP F  +EM LKI E ++ GT F L++A+D D G N++QNY IS NS FH+
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
                 +G  YPELVLD  LDREEQ EL LTLTA+DGGSP RSGT  I I+VLD NDNAP
Sbjct: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +F QALYE Q PENSPVGSL+VKVSA D D+G N E+SYS + +S++I   F+++  SGE
Sbjct: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           I L + LD+E ++SY ++I+A DGGGLS +C+V +KVLD NDN PEL ISSL++ + ENS
Sbjct: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           P   +A+F+I+DRDSGENGK IC +QD++PF LKPSV+NFY L+TEGALDRE++AEYNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           IT+TDLGTPRLKTE SIT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQVTYSLLPP+DPHLPL SLVSIN DNGHLFAL+SLDYEALQAF+FRVGA+DRG PA
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHL 774
           SVGRCSVPEGPFPGHLVDVSGTGTL QSYQYEVCLTGGSE+ +FKFLKPI P++
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNI 774


>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
          Length = 798

 Score = 1160 bits (3001), Expect = 0.0
 Identities = 583/787 (74%), Positives = 659/787 (83%)

Query: 9   PRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68
           P+QRQVL  F+  G++ A      YSV EETE GSFV NL KDLGL  GELA RG RVVS
Sbjct: 11  PKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVS 70

Query: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
              K +L  D  TG+LL NEKLDRE+LCGP EPC+L FQ+L+++P Q ++AELR+RD+ND
Sbjct: 71  KGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVND 130

Query: 129 HSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEG 188
           HSPVF  KE++LKI E+   GT F +ERAQD D G NS+QNYTIS N  FH+ +  S +G
Sbjct: 131 HSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDG 190

Query: 189 MIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYE 248
           +I P+LVL++ALDREEQ E+ LTLTALDGGSP RSGT+ +RI V+D+NDN P+FA+ LYE
Sbjct: 191 IILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYE 250

Query: 249 TQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLD 308
            Q PE+SPVGS +  VSA D D G N E+SY+F  ASEDI  TF+++  SGE+ LR+ LD
Sbjct: 251 VQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLD 310

Query: 309 YELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVF 368
           +E + +Y +NIQA DGGGLS  C V ++V+D NDNPPEL +S+L N + EN    ++AVF
Sbjct: 311 FESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVF 370

Query: 369 KIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGT 428
            + D DSG+NG+ +C +QD+LPFFLKPSV+NFY L+   ALDRE+++EYNITITVTD GT
Sbjct: 371 SVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGT 430

Query: 429 PRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           PRLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 431 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 490

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVR 548
           SLLPPQDPHLPLASLVSINADNGHLFAL+SLDYEALQAF+FRVGA+DRGSPALSSEALVR
Sbjct: 491 SLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVR 550

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 551 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 610

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           ATEPGLFGVWAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQ
Sbjct: 611 ATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 670

Query: 669 PYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVP 728
           PYL LPEAAPAQAQADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCSVP
Sbjct: 671 PYLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVP 730

Query: 729 EGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENST 788
           EGPFPG +VDVSGTGTL QSYQYEVCLTGGS T EFKFLKPI P+       +  E N +
Sbjct: 731 EGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPS 790

Query: 789 LPNSFGF 795
              SF F
Sbjct: 791 FRKSFEF 797


>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
          Length = 776

 Score = 1153 bits (2982), Expect = 0.0
 Identities = 572/767 (74%), Positives = 657/767 (85%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
           RQRQVL  F+   +S AG+  G YSV EETE+GSFV NL KDLGL   E++ R  R++S 
Sbjct: 10  RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69

Query: 70  DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
            NKQ+L L + TG+LL NEKLDRE+LCGP EPC+L+FQ+LM++P +I++AELRV DINDH
Sbjct: 70  GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129

Query: 130 SPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGM 189
           SP+F  KEM+LKI EN+  GT F L  A D D G N++QNY IS +S F + I    +G 
Sbjct: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189

Query: 190 IYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYET 249
            YPELVLDK LDREE+ +L LTLTALDGGSP RSGT+ +RI V+D+NDNAP+F Q +Y+ 
Sbjct: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249

Query: 250 QAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDY 309
           Q PENSP+GSL+  VSA D D G N ++SY+ F  SEDI  T ++NP +GE+ LR+ +D+
Sbjct: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309

Query: 310 ELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAVFK 369
           E+V SY++ I+A DGGGLS +CT+L++V+D NDNPP++ +S+L++ + ENSP IV+AVF 
Sbjct: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369

Query: 370 IKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTP 429
           + D DSG NGKTI  +Q++LPF LKPSV NFY L+TE ALDRE++AEYNIT+TVTD+GTP
Sbjct: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429

Query: 430 RLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
           RLKTEH+IT+Q+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS
Sbjct: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489

Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRV 549
           LLPPQDPHLPLASLVSINADNGHLFALRSLDYEAL+ F+FRV A+DRGSPALSSEALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549

Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
           LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609

Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
           TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669

Query: 670 YLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 729
           +LPLPEAAP Q QA+ LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS+PE
Sbjct: 670 FLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSMPE 729

Query: 730 GPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPP 776
           GPFPG LVDVSGTGTL QSYQYEVCLTGGSET EFKFLKPI P+  P
Sbjct: 730 GPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSP 776


>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
          Length = 798

 Score = 1143 bits (2956), Expect = 0.0
 Identities = 584/797 (73%), Positives = 662/797 (83%), Gaps = 2/797 (0%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGEL 59
           M+  G    RQRQVLF FL  G+SLAG+   R YSV EETE  SFV NLAKDLGL + E 
Sbjct: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60

Query: 60  AARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRA 119
           + RG RVVS  NK +L L+  T +LL NEKLDRE LCG  EPC+L FQ+L++ PF+ ++A
Sbjct: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120

Query: 120 ELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFH 179
           EL+V DINDHSPVF  K+M++K+SE++  GT F L+ A+D D G N+I+NY IS NS+F 
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180

Query: 180 IKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNA 239
           +      +G  YPELVLDKALDREE+ EL LTLTALDGGSP RSGT+ + I VLDVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240

Query: 240 PQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSG 299
           P+F Q  Y  Q  E+SPVG L+VKVSA D D+GVN E+SYS F ASE+I  TF+INP +G
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300

Query: 300 EIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAEN 359
           EI L++ LD+E + SY++NI+A D G  S +CTVLI+V+D ND+ PE+ +S+ ++ + EN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360

Query: 360 SPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNI 419
           +P  V+A+F + D DSGENGK  C +Q++LPF LK S +NFY L+TE  LDRES+AEYNI
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNI 419

Query: 420 TITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
           TITVTDLGTP L T+ ++T+ ++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479

Query: 480 SGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSP 539
           SGTNAQVTYSLLPPQDPHLPL SLVSINADNGHLFALRSLDYEALQ F FRVGASD GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539

Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599

Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659

Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 719
           VLLVDGFSQPYLPLPEAAP QAQADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719

Query: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRG 779
           ASVGRC VPEGP PGHLVD+SGT TL QSYQYEVCL GGS T EFKFLKPI P+ PP   
Sbjct: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779

Query: 780 GKEIEENSTLPNSFGFN 796
           GKEI+ NST PN+FGFN
Sbjct: 780 GKEIQGNSTFPNNFGFN 796


>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
          Length = 795

 Score = 1142 bits (2955), Expect = 0.0
 Identities = 588/796 (73%), Positives = 657/796 (82%), Gaps = 1/796 (0%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           MK  G   P  RQVL   L   +S       RYSV EETE GSFV +LAKDLGL  GELA
Sbjct: 1   MKKLGRIHPN-RQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELA 59

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           +R  RV+SDD+KQ L LD  TG+LL  EKLDRE+LCGP EPC+L+FQ+ ++ P Q ++ E
Sbjct: 60  SRSARVLSDDDKQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGE 119

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           L ++DINDHSP+F  +E++LKI EN+  GT F L  A+D D G N +Q YTIS NS FHI
Sbjct: 120 LLIQDINDHSPIFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHI 179

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
                 EG  YP+LV DK LDREEQ E SLTL ALDGGSP RSGT  +RI+++D+NDNAP
Sbjct: 180 LTRNHSEGKKYPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAP 239

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +F    Y  Q  ENSP+ S IV+V A D D+G    VSY  F AS++I  TF IN  +GE
Sbjct: 240 EFVHTPYGVQVLENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGE 299

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           I L++ LD+E + SY + I+A DGGGLS + TV+I+V+D NDNPPELIISSL++S+ EN+
Sbjct: 300 ILLKKKLDFEKIKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENA 359

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           P  V+++F+I+DRDSGENGK IC + DNLPF LKP++ NFY L+TE  LDRE+ AEYNIT
Sbjct: 360 PETVVSIFRIRDRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNIT 419

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           I VTDLGTPRLKT+ +IT+QVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 420 IAVTDLGTPRLKTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAF+FRVGASDRGSPA
Sbjct: 480 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPA 539

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 600 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
           SVGRCSVPEGPFPGHLVDVSGTGTL QSYQYEVCLTG S TGEFKFLKPI P+L     G
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTG 779

Query: 781 KEIEENSTLPNSFGFN 796
           +E++EN    NS  F+
Sbjct: 780 REVKENPKFRNSLVFS 795


>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
          Length = 797

 Score = 1137 bits (2941), Expect = 0.0
 Identities = 584/797 (73%), Positives = 660/797 (82%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M+ +G    + RQVL LF+  G+S AGS    +SV EE + GSFV NLAKDLGL   EL+
Sbjct: 1   MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           +RG RVVS+D KQ L LD +TG+LL +E LDRE+LCG  EPC+L+ Q+LM +P Q  + E
Sbjct: 61  SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           L+VRDINDHSP+F  K+M+L+I EN+  G  F LE A+D D G N++++YTIS NS FHI
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
           K+    +   YPELVLDKALD EE  ELS  L+ALDGGSP RSGT+ +R+VV+D+NDN+P
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +F QA YE +  ENS +GSLI+ VSA D DSG N E+ Y+F  ASEDI  TF+IN  SGE
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           I LR  LD+E + SY I IQA DGGGL  + TV+I V+D NDN PE+ +SS+++ + EN+
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           P  V+ VF I+D DSG+NG+ +C + ++LPF LK SV+N+Y L TE  LDRES AEYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLG PRLKTEH+ T+ VSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQV YSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEALQAFDFRVGA+DRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
           SVG CSVP+GPFPGHLVDVSGTGTL QSYQYEVCLTGGSET EFKFLKP+ P++     G
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780

Query: 781 KEIEENSTLPNSFGFNY 797
           K  EENST  NSFGFN+
Sbjct: 781 KNSEENSTFRNSFGFNF 797


>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
          Length = 795

 Score = 1137 bits (2940), Expect = 0.0
 Identities = 578/795 (72%), Positives = 659/795 (82%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M+  G    + RQVL  F+  G+S AGS  G + V EE + GSFV NLAK LGL   EL+
Sbjct: 1   MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           +RG RVVS+DNK+ L LD++TG+LL  E LDRE+LCG  EPC+LYFQ+LM +P Q  + E
Sbjct: 61  SRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           L+VRDINDHSPVF  KEM+L+I EN+  G  F LE A+D D G N++++YTI+ NS FH+
Sbjct: 121 LQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHV 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
           KI  + +   YPELVLDKALD EE+ ELS  LTALDGGSP RSGT+ +R+VV+D+NDN+P
Sbjct: 181 KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +F QA YE +  ENS +GSL+V VSA D DSG N+E+SY+F  ASEDI  TF+IN  SG+
Sbjct: 241 EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           I L   LD+E + SY I IQA DGGGL  + TV I+V+D NDN PE+ +SS+++ + EN+
Sbjct: 301 ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT 360

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           P  V+ VF+I+DRDSG+NGK +C + +++PF LK SV+N+Y L TE  LDRES+AEYNIT
Sbjct: 361 PETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTEH+IT+ VSDVNDNAPAFTQTSY LFVRENNSPALHIGS+SATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQV YSLLP QDPHLPLASLVSINADNGHLFALRSLDYEALQ F FRVGA+D GSPA
Sbjct: 481 GTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPA 540

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
            VGRCSVPEGPFPGHLVDVSGTGTL QSY YEVC+TGGS + +FKFLKPI P+  P   G
Sbjct: 721 PVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTG 780

Query: 781 KEIEENSTLPNSFGF 795
            E+EEN    N+ GF
Sbjct: 781 SEVEENPPFQNNLGF 795


>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
          Length = 794

 Score = 1135 bits (2937), Expect = 0.0
 Identities = 579/789 (73%), Positives = 656/789 (83%), Gaps = 5/789 (0%)

Query: 10  RQRQVLF--LFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
           ++RQV F  L + WG    GS   +YSV EETE G+FV NL KDLGL  GELA+RG RVV
Sbjct: 9   KKRQVAFFILLMLWGE--VGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVV 66

Query: 68  SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
              N+Q+L  D  T +LL NEKLDRE+LCG  EPC+L FQ+L+++P Q ++A LRVRDIN
Sbjct: 67  FKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIN 126

Query: 128 DHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDE 187
           DH+P F  +EM+LKISE T  G  F L+ A D D G N +Q YTISSN  FH+      E
Sbjct: 127 DHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSE 186

Query: 188 GMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY 247
           G  +PELVLDK LDREEQ +L LTL ALDGGSP RSGTS I+I VLD+NDN P+FAQ LY
Sbjct: 187 GRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246

Query: 248 ETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELL 307
           E Q PEN+P+GSL++ VSA D D+G   +VSY+ F   +D+   F+IN  +GEI LR+ L
Sbjct: 247 EAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKAL 305

Query: 308 DYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPGIVLAV 367
           D+E + SY ++++A DGGGLS +C+++++VLD NDN PEL +S   + + EN P I +AV
Sbjct: 306 DFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAV 365

Query: 368 FKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLG 427
           F + D DSG N + IC +++NLPF L+PSV+NFY L+TEGALDRES+AEYNITITVTDLG
Sbjct: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLG 425

Query: 428 TPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
           TPRLKT+ SIT+QVSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVT
Sbjct: 426 TPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVT 485

Query: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALV 547
           YSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ+F+FRVGA+DRGSPALSSEALV
Sbjct: 486 YSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALV 545

Query: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
           R+LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 546 RLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 605

Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
           KATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS
Sbjct: 606 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 665

Query: 668 QPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSV 727
           QPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGR SV
Sbjct: 666 QPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSV 725

Query: 728 PEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGGKEIEENS 787
           PEGPFPGHLVDVSGTGTL QSYQY+VCLTGGSET EFKFLKPI P+ PP    +E+EE  
Sbjct: 726 PEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETP 785

Query: 788 TLPNSFGFN 796
           T  NSF F+
Sbjct: 786 TSRNSFPFS 794


>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
          Length = 801

 Score = 1133 bits (2931), Expect = 0.0
 Identities = 575/797 (72%), Positives = 660/797 (82%), Gaps = 1/797 (0%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGEL 59
           M+  G    RQRQVLF FL  G+SLAG+   R YSV EETE  SFV NLAKDLGL + E 
Sbjct: 1   MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60

Query: 60  AARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRA 119
           + RG RVVS  NK +L L+  T +LL NEKLDRE LCG  EPC+L FQ+L++ PF+ ++A
Sbjct: 61  SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120

Query: 120 ELRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFH 179
           EL+V DINDHSPVF  K+M++K+SE++  GTAF L+ A+D D G N+I+NY IS NS+F 
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180

Query: 180 IKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNA 239
           +      +G  YPELVLD ALDREE+ EL LTLTALDGGSP RSGT+ + I V+DVNDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240

Query: 240 PQFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSG 299
           P+F Q  Y  Q  E+SP+  L+VKVSA D D+GVN E+SYS F AS++I  TF+++  +G
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300

Query: 300 EIFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAEN 359
           EI L++ LD+E   SY++NI+A D GG S +CTVLI+V+D ND+ PE+ +S+ ++ + EN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360

Query: 360 SPGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNI 419
           +P  V+A+F + D DSGENGK  C +Q++LPF LK SV NFY L+TE  LDRES+AEYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420

Query: 420 TITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
           TITVTDLGTPRL T  ++T+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480

Query: 480 SGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSP 539
           SGTNAQVTYSLLPPQDPHLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGASDRGSP
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540

Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
           ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600

Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
           AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660

Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA 719
           +LLVDGFSQPYLPLPEAAPAQ QAD LTVYLVVALASVSSLFL SVLLFVAV LCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720

Query: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRG 779
           ASVGRCSVPEGPFPGHLVDV GTG+L Q+YQYEVCL GGS T EF+FLKP+ P++  H  
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780

Query: 780 GKEIEENSTLPNSFGFN 796
           G E+E+NS   N FGF+
Sbjct: 781 GPEMEQNSNFRNGFGFS 797


>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
          Length = 795

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 580/796 (72%), Positives = 655/796 (82%), Gaps = 1/796 (0%)

Query: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M+T     P++RQV+FL +   +  AGS   RYS+ EETE G  V NLAKDLGL  GELA
Sbjct: 1   METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
            RG R+    NK+ L LD  TGNLL  EKLDRE +CG  EPC+L+FQ+L+++P Q ++ +
Sbjct: 61  TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120

Query: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
           L++ DINDH+P F  KEM+LKI E+T  GT F L+ AQD D G N++QNYTIS NS FH+
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180

Query: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
                 +G  YPELVLDKALDREE+ ELSLTLTALDGG+P RSGT+TIRIVVLD NDNAP
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240

Query: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
           +F Q+ YE Q PENSP+ SL+V VSA D D+G    V+Y+ F   E +   F I+  + E
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
           I L+  LD+E    Y + I A DGGGLS +CTV I+V+D NDN PEL +S+LS+   EN+
Sbjct: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359

Query: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
           P  V+AVF + D DSG+NG+ IC +Q++LPF LKP++ NFY L+T+  LDRES+AEYNIT
Sbjct: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419

Query: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTD+GTPRLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
           GTNAQVTYSLLPPQ+PHL LASLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPA
Sbjct: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539

Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
           WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659

Query: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
           LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719

Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
           SVGRCSVPEGPFPGHLVDVSGTGTL QSY YEVCLTG S  GEFKFLKPI P+L P   G
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779

Query: 781 KEIEENSTLPNSFGFN 796
           +EI + +   NSFG N
Sbjct: 780 EEIGKTAAFRNSFGLN 795


>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
          Length = 818

 Score =  768 bits (1984), Expect = 0.0
 Identities = 400/787 (50%), Positives = 544/787 (69%), Gaps = 6/787 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
           + RQV  L +F  +S+  +   RYSV EE E GSFV N+AKDLGL  G+LAARG R+VS+
Sbjct: 10  QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69

Query: 70  DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
            NK +  L   TG+L   EKLDRE LCG  +PC+L+F++++ +P Q +RAE+RV DIND+
Sbjct: 70  GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129

Query: 130 SPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGM 189
           +PVF +KE +LKI E+T  G+ F L+ AQD D G N +QNYT+S+N +FH+       G 
Sbjct: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189

Query: 190 IYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYET 249
            Y ELVL+K LDREEQ E++LT+TA+DGGSP +SGT+ I +VVLDVND+ PQF++ +Y  
Sbjct: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249

Query: 250 QAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDY 309
           Q  ENSP GSL+  V+A D D G N  ++YS     E IL TFQI+P +GE+ LR  LD+
Sbjct: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309

Query: 310 ELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSPG-IVLAVF 368
           E + +Y I+IQA DGGGLSA   VL++V+D NDNPPE+++SS+S+ + E+SP   V+A+F
Sbjct: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369

Query: 369 KIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGT 428
            I+DRD    GK  C+++++LPF +KP+  N Y L+T+ +LDRE  + YNITI   D G 
Sbjct: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429

Query: 429 PRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           P L  E  I + +SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVR 548
           SLLPP++  L + + +SIN+ NG L+ALR++DYEA+Q F F V A+D G  +LSS+  VR
Sbjct: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668
           AT+ GLF V   NGE+ T R +SERD    +L++LV+D+G+P  S T +L++LLVDGFS+
Sbjct: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669

Query: 669 PYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR---AASVGRC 725
           PYL   +      + +  T YLV++L  +S LFLLSV++   + + ++ +     ++   
Sbjct: 670 PYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQEH 729

Query: 726 SVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLP-PHRGGK-EI 783
              +  F  +LV   G G+L +   YE+C   G+   EF+FLK   P+ P PH  G+ ++
Sbjct: 730 FYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATGEIKM 789

Query: 784 EENSTLP 790
           E  S+LP
Sbjct: 790 EAGSSLP 796


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  651 bits (1680), Expect = 0.0
 Identities = 363/743 (48%), Positives = 470/743 (63%), Gaps = 6/743 (0%)

Query: 32  RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLD 91
           RYSV EE EKGS V ++++DLGL   ELA RG R++     Q   L+  +G+L+T  ++D
Sbjct: 32  RYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQLFALNPRSGSLVTAGRID 91

Query: 92  REKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTA 151
           RE+LC     C L   ILM+D  +IY  E+ VRDIND++P FR  E+ +KISEN A    
Sbjct: 92  REELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYFRESELEIKISENAATEMR 151

Query: 152 FRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLT 211
           F L  A DPD G NS+Q+Y +S N+ F + +    +G  YPELVL +ALDREE+    L 
Sbjct: 152 FPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPELVLKRALDREEKAAHHLV 211

Query: 212 LTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADS 271
           LTA DGG P R+GT+ IR++VLD NDNAP FAQ  Y    PEN  +G+ ++ V+A D D 
Sbjct: 212 LTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPENLALGTQLLVVNATDPDE 271

Query: 272 GVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARC 331
           GVNAEV YSF    +     F+++  SG I     LD+E    Y++ +QAMD  G SAR 
Sbjct: 272 GVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESGFYQMEVQAMDNAGYSARA 331

Query: 332 TVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGKTICYVQDNLP 390
            VLI VLD NDN PE++++SL++SV ENSP G ++A+  + D+DS ENG+ IC++Q NLP
Sbjct: 332 KVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVNDQDSEENGQVICFIQGNLP 391

Query: 391 FFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPA 450
           F L+ S  N+Y L+T+  LDRE    YNIT+T TD GTP L TE  I+L V+D NDN P 
Sbjct: 392 FKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPV 451

Query: 451 FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADN 510
           F Q SY+ ++ ENN   + + SV+A D D   NAQ+TYSL         L+S VSIN+D 
Sbjct: 452 FPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAENTIQGASLSSYVSINSDT 511

Query: 511 GHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGS 569
           G L+AL S DYE  +    +V A D G P LSS   + + VLD NDN+P +LYP L    
Sbjct: 512 GVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTDG 571

Query: 570 APCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629
           +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEVRTAR 
Sbjct: 572 STGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARA 631

Query: 630 LSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE-AAPAQAQADLLTV 688
           L +RDA K  LVV V+D+G+PP SAT TL V + D   Q    L    +PA ++   LT+
Sbjct: 632 LLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSLESPANSETSDLTL 691

Query: 689 YLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVSGTGTLF 746
           YLVVA+A+VS +FL  V+L +A+RL R  +SR        +   P   H V V G     
Sbjct: 692 YLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLTGAP-ASHFVGVDGVQAFL 750

Query: 747 QSYQYEVCLTGGSETGEFKFLKP 769
           Q+Y +EV LT  S      F +P
Sbjct: 751 QTYSHEVSLTTDSRKSHLIFPQP 773


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  651 bits (1680), Expect = 0.0
 Identities = 363/743 (48%), Positives = 470/743 (63%), Gaps = 6/743 (0%)

Query: 32  RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLD 91
           RYSV EE EKGS V ++++DLGL   ELA RG R++     Q   L+  +G+L+T  ++D
Sbjct: 32  RYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQLFALNPRSGSLVTAGRID 91

Query: 92  REKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTA 151
           RE+LC     C L   ILM+D  +IY  E+ VRDIND++P FR  E+ +KISEN A    
Sbjct: 92  REELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYFRESELEIKISENAATEMR 151

Query: 152 FRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLT 211
           F L  A DPD G NS+Q+Y +S N+ F + +    +G  YPELVL +ALDREE+    L 
Sbjct: 152 FPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPELVLKRALDREEKAAHHLV 211

Query: 212 LTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADS 271
           LTA DGG P R+GT+ IR++VLD NDNAP FAQ  Y    PEN  +G+ ++ V+A D D 
Sbjct: 212 LTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPENLALGTQLLVVNATDPDE 271

Query: 272 GVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARC 331
           GVNAEV YSF    +     F+++  SG I     LD+E    Y++ +QAMD  G SAR 
Sbjct: 272 GVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESGFYQMEVQAMDNAGYSARA 331

Query: 332 TVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGKTICYVQDNLP 390
            VLI VLD NDN PE++++SL++SV ENSP G ++A+  + D+DS ENG+ IC++Q NLP
Sbjct: 332 KVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVNDQDSEENGQVICFIQGNLP 391

Query: 391 FFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPA 450
           F L+ S  N+Y L+T+  LDRE    YNIT+T TD GTP L TE  I+L V+D NDN P 
Sbjct: 392 FKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPV 451

Query: 451 FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADN 510
           F Q SY+ ++ ENN   + + SV+A D D   NAQ+TYSL         L+S VSIN+D 
Sbjct: 452 FPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAENTIQGASLSSYVSINSDT 511

Query: 511 GHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGS 569
           G L+AL S DYE  +    +V A D G P LSS   + + VLD NDN+P +LYP L    
Sbjct: 512 GVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTDG 571

Query: 570 APCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629
           +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEVRTAR 
Sbjct: 572 STGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARA 631

Query: 630 LSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPE-AAPAQAQADLLTV 688
           L +RDA K  LVV V+D+G+PP SAT TL V + D   Q    L    +PA ++   LT+
Sbjct: 632 LLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSLESPANSETSDLTL 691

Query: 689 YLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVSGTGTLF 746
           YLVVA+A+VS +FL  V+L +A+RL R  +SR        +   P   H V V G     
Sbjct: 692 YLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLTGAP-ASHFVGVDGVQAFL 750

Query: 747 QSYQYEVCLTGGSETGEFKFLKP 769
           Q+Y +EV LT  S      F +P
Sbjct: 751 QTYSHEVSLTTDSRKSHLIFPQP 773


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score =  649 bits (1675), Expect = 0.0
 Identities = 366/764 (47%), Positives = 478/764 (62%), Gaps = 11/764 (1%)

Query: 14  VLFLFLFWGVSL-AGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNK 72
           ++ L LF+G+   AG+    YS+ EE EKGSFV N++KDLGLA  ELA RG R+VS    
Sbjct: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76

Query: 73  QYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPV 132
           Q   L+  +G+L+T  ++DRE+LC     C++ F IL++D  +++  E+ V DIND++P 
Sbjct: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136

Query: 133 FRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYP 192
           F+ + + +KI+EN A G  F L  A DPD G NS+Q+Y +S N  F +++     G+ YP
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196

Query: 193 ELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAP 252
           ELVL+ +LDREE+    L LTA DGG P RSGT  + + V D NDNAP F    Y    P
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256

Query: 253 ENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELV 312
           EN PVG+ ++ V+A D D G N EV+YSF    +  L  FQ+N ++GEI + E LDYE  
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316

Query: 313 NSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIK 371
             Y+I IQA DGG   A   VLI V D NDN PEL I+SL + V E+SP G V+A+  + 
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376

Query: 372 DRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRL 431
           D DS +NG+  C +   LPF L+ S+D++Y L+   ALDRE  + YNIT+T TD G+P L
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436

Query: 432 KTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
            TE    LQV+D+NDN P F+Q SY  ++ ENN+    I SV+A D DS  NAQ+ YSL 
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496

Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLV 551
                 +PL+S +SIN+D G L+ALRS DYE       +V ASD G P LSS   + + V
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556

Query: 552 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
           LD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616

Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 670
           EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q  
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676

Query: 671 LPLPE-AAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR----RSRAASVGRC 725
             L    +PA ++   LT+YLVVA+A+VS +FL  V++ +A RL R    R   AS G  
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736

Query: 726 SVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
           +   G    H V V G     Q+Y +EV LT  S      F +P
Sbjct: 737 TGVSG---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score =  649 bits (1675), Expect = 0.0
 Identities = 366/764 (47%), Positives = 478/764 (62%), Gaps = 11/764 (1%)

Query: 14  VLFLFLFWGVSL-AGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNK 72
           ++ L LF+G+   AG+    YS+ EE EKGSFV N++KDLGLA  ELA RG R+VS    
Sbjct: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76

Query: 73  QYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPV 132
           Q   L+  +G+L+T  ++DRE+LC     C++ F IL++D  +++  E+ V DIND++P 
Sbjct: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136

Query: 133 FRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYP 192
           F+ + + +KI+EN A G  F L  A DPD G NS+Q+Y +S N  F +++     G+ YP
Sbjct: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196

Query: 193 ELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAP 252
           ELVL+ +LDREE+    L LTA DGG P RSGT  + + V D NDNAP F    Y    P
Sbjct: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256

Query: 253 ENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELV 312
           EN PVG+ ++ V+A D D G N EV+YSF    +  L  FQ+N ++GEI + E LDYE  
Sbjct: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316

Query: 313 NSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIK 371
             Y+I IQA DGG   A   VLI V D NDN PEL I+SL + V E+SP G V+A+  + 
Sbjct: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376

Query: 372 DRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRL 431
           D DS +NG+  C +   LPF L+ S+D++Y L+   ALDRE  + YNIT+T TD G+P L
Sbjct: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436

Query: 432 KTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
            TE    LQV+D+NDN P F+Q SY  ++ ENN+    I SV+A D DS  NAQ+ YSL 
Sbjct: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496

Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLV 551
                 +PL+S +SIN+D G L+ALRS DYE       +V ASD G P LSS   + + V
Sbjct: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556

Query: 552 LDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKAT 610
           LD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+
Sbjct: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616

Query: 611 EPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPY 670
           EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D   Q  
Sbjct: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676

Query: 671 LPLPE-AAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR----RSRAASVGRC 725
             L    +PA ++   LT+YLVVA+A+VS +FL  V++ +A RL R    R   AS G  
Sbjct: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736

Query: 726 SVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
           +   G    H V V G     Q+Y +EV LT  S      F +P
Sbjct: 737 TGVSG---SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 777


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score =  649 bits (1675), Expect = 0.0
 Identities = 364/748 (48%), Positives = 478/748 (63%), Gaps = 6/748 (0%)

Query: 27  GSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLT 86
           GSG  RYS+ EE +KGSFV N+AKDLGL   ELA RG R+VS    Q   L+  +G+L+T
Sbjct: 27  GSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVT 86

Query: 87  NEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENT 146
             ++DRE+LC     C++ F IL+++  +IY  E+ + DIND+ P FR +E+ +K++EN 
Sbjct: 87  AGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENA 146

Query: 147 AEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQE 206
           A GT   L  A+D D G NS+++Y +SSN  F + +    +G  YPELVL++ LDRE++ 
Sbjct: 147 AAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKET 206

Query: 207 ELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSA 266
              L LTALDGG P  SGT+ IR+ VLD NDNAP F  + Y    PEN PVG+ ++ ++A
Sbjct: 207 VHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTA 266

Query: 267 GDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGG 326
            D D G+N +++YSF +  E I  TFQ++   GEI   + LDYE    Y + + A DGG 
Sbjct: 267 TDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA 326

Query: 327 LSARCTVLIKVLDSNDNPPELIISSLSNSVAENS-PGIVLAVFKIKDRDSGENGKTICYV 385
           L A   V++ V D NDN PE+I++SL++S++E+  PG V+A+F + D DSGENG+  C +
Sbjct: 327 LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386

Query: 386 QDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVN 445
             NLPF L+ SVDN+Y L+T   LDRE  ++YNIT+TV D GTP L TE  I L+V+DVN
Sbjct: 387 PRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVN 446

Query: 446 DNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 505
           DN P F Q SY+  V ENN   + I SV+A D DSG NA+VTYSL        PL+S VS
Sbjct: 447 DNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVS 506

Query: 506 INADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP- 564
           IN+D G L+ALRS DYE L+     V ASD G+P LSS   + + VLD NDN+P +LYP 
Sbjct: 507 INSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA 566

Query: 565 LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV 624
           L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEV
Sbjct: 567 LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEV 626

Query: 625 RTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQAD 684
           RTAR L +RDA K  LVV V+D+G+PP SAT T+ V + D        L          D
Sbjct: 627 RTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPIDPED 686

Query: 685 L-LTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVSG 741
           L LT+YLVVA+A+VS +FL  V++ + +RL R  +SR        +   P   H V V G
Sbjct: 687 LDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVP-ASHFVGVDG 745

Query: 742 TGTLFQSYQYEVCLTGGSETGEFKFLKP 769
                Q+Y +EV LT  S      F +P
Sbjct: 746 VRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  649 bits (1675), Expect = 0.0
 Identities = 364/748 (48%), Positives = 478/748 (63%), Gaps = 6/748 (0%)

Query: 27  GSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLT 86
           GSG  RYS+ EE +KGSFV N+AKDLGL   ELA RG R+VS    Q   L+  +G+L+T
Sbjct: 27  GSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVT 86

Query: 87  NEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENT 146
             ++DRE+LC     C++ F IL+++  +IY  E+ + DIND+ P FR +E+ +K++EN 
Sbjct: 87  AGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENA 146

Query: 147 AEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQE 206
           A GT   L  A+D D G NS+++Y +SSN  F + +    +G  YPELVL++ LDRE++ 
Sbjct: 147 AAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKET 206

Query: 207 ELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSA 266
              L LTALDGG P  SGT+ IR+ VLD NDNAP F  + Y    PEN PVG+ ++ ++A
Sbjct: 207 VHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTA 266

Query: 267 GDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGG 326
            D D G+N +++YSF +  E I  TFQ++   GEI   + LDYE    Y + + A DGG 
Sbjct: 267 TDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA 326

Query: 327 LSARCTVLIKVLDSNDNPPELIISSLSNSVAENS-PGIVLAVFKIKDRDSGENGKTICYV 385
           L A   V++ V D NDN PE+I++SL++S++E+  PG V+A+F + D DSGENG+  C +
Sbjct: 327 LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386

Query: 386 QDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVN 445
             NLPF L+ SVDN+Y L+T   LDRE  ++YNIT+TV D GTP L TE  I L+V+DVN
Sbjct: 387 PRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVN 446

Query: 446 DNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 505
           DN P F Q SY+  V ENN   + I SV+A D DSG NA+VTYSL        PL+S VS
Sbjct: 447 DNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVS 506

Query: 506 INADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP- 564
           IN+D G L+ALRS DYE L+     V ASD G+P LSS   + + VLD NDN+P +LYP 
Sbjct: 507 INSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA 566

Query: 565 LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV 624
           L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEV
Sbjct: 567 LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEV 626

Query: 625 RTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQAD 684
           RTAR L +RDA K  LVV V+D+G+PP SAT T+ V + D        L          D
Sbjct: 627 RTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPIDPED 686

Query: 685 L-LTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVSG 741
           L LT+YLVVA+A+VS +FL  V++ + +RL R  +SR        +   P   H V V G
Sbjct: 687 LDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVP-ASHFVGVDG 745

Query: 742 TGTLFQSYQYEVCLTGGSETGEFKFLKP 769
                Q+Y +EV LT  S      F +P
Sbjct: 746 VRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  647 bits (1668), Expect = 0.0
 Identities = 369/771 (47%), Positives = 476/771 (61%), Gaps = 18/771 (2%)

Query: 10  RQRQVLFLFLF---WGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRV 66
           R  QVL L L    WG + A     RYS+ EE EKGSFV N+ KDLGL   ELA  G R+
Sbjct: 10  RSEQVLLLTLLGTLWGAAAAQI---RYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRI 66

Query: 67  VSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDI 126
           VS    Q   L+   G+L+T  ++DRE+LC     C++ F IL++D   +Y  E+ + DI
Sbjct: 67  VSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDI 126

Query: 127 NDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSD 186
           ND++P F  +E+ +KI EN A  + F L    DPD G NS+Q + +S NS F + +    
Sbjct: 127 NDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEA 186

Query: 187 EGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQAL 246
            G  YPELVL+  LDRE +    L LTA+DGG P RS  + I + VLDVNDN P F Q +
Sbjct: 187 HGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPV 246

Query: 247 YETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLREL 306
           Y    PEN PVG+ ++ V+A D D GV+ EV+YSF   +E I   F +N  +GEI     
Sbjct: 247 YRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSAN 306

Query: 307 LDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS-PGIVL 365
           LDYE  + Y++ ++A DG GL  R  VLI +LD NDN PE++++S S ++AE++ PG V+
Sbjct: 307 LDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVI 366

Query: 366 AVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTD 425
           A+F++ DRDSG NG   C +  +LPF L+ SV N+Y L+T  ALDRE    YNIT+T TD
Sbjct: 367 ALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATD 426

Query: 426 LGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
            GTP L TE  I+L V+D NDN P F  +SY+++V ENN     I SV+A D D   NAQ
Sbjct: 427 KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQ 486

Query: 486 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEA 545
           V+YSL        PL+S VSIN+D G L+ALRS DYE L+     V ASD G P LSS  
Sbjct: 487 VSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNV 546

Query: 546 LVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 604
            + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 547 SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY 606

Query: 605 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVD 664
           +LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D
Sbjct: 607 RLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 666

Query: 665 GFSQPYLPLPEAAPAQAQADL-LTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR--- 718
                   L    P+    D  LT+YLVVA+A+VS +FL  V++ +A+RL R  +SR   
Sbjct: 667 RIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQ 726

Query: 719 AASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
           A+  G  S+P      H V V G     Q+Y +EV LT  S      F +P
Sbjct: 727 ASGGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  647 bits (1668), Expect = 0.0
 Identities = 359/752 (47%), Positives = 474/752 (63%), Gaps = 12/752 (1%)

Query: 26  AGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLL 85
           AG+G   YSV EET+KGSFV N+AKDLGL   ELA  G R+VS        L+  +G+L+
Sbjct: 26  AGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLI 85

Query: 86  TNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISEN 145
           T  ++DRE+LC    PC++ F IL++D  +++  E+ + DIND++P F+ +E+  K++E 
Sbjct: 86  TARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEI 145

Query: 146 TAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQ 205
           T  GT   L   QD D G NS+Q+Y +SSN  F + +    +G  +PE+VL   LDREE+
Sbjct: 146 TTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPLDREEE 205

Query: 206 EELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVS 265
               L LTA DGG P RSGT  I I V+D NDN P F QA Y    PEN P+G+ ++ V+
Sbjct: 206 AVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGTQLLMVN 265

Query: 266 AGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGG 325
           A D D G N EV+YSF +    +   F+++ ++GEI  +E LD+E    Y + +QA DG 
Sbjct: 266 ATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSMEVQAQDGA 325

Query: 326 GLSARCTVLIKVLDSNDNPPELIISSLSNSVAEN-SPGIVLAVFKIKDRDSGENGKTICY 384
           GL A+  VLIKVLD NDN PE+ I+S++ +V EN  PG ++A+  + D+DSG+NG T C+
Sbjct: 326 GLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCF 385

Query: 385 VQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDV 444
           +  NLPF L+  VDN+Y L+TE  LDRE  + YNITIT  D GTP L TE  I+L V+D+
Sbjct: 386 IPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDI 445

Query: 445 NDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLV 504
           NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL+       PL++ +
Sbjct: 446 NDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAYL 505

Query: 505 SINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP 564
           SIN+D G L+ALRS DYE  +    +V A D G P LSS   + + +LD NDN+P +LYP
Sbjct: 506 SINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNAPEILYP 565

Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
            L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GE
Sbjct: 566 ALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGE 625

Query: 624 VRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQA 683
           VRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  S     L    P+    
Sbjct: 626 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLEPSAKPN 685

Query: 684 DL-LTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLV 737
           D  LT+YLVVA A+VS +FL  V++ +A RL R  +SR   A+  G  S+P      H V
Sbjct: 686 DSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMP----GSHFV 741

Query: 738 DVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
            V G     Q+Y +EV LT  S      F +P
Sbjct: 742 GVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  647 bits (1668), Expect = 0.0
 Identities = 369/771 (47%), Positives = 476/771 (61%), Gaps = 18/771 (2%)

Query: 10  RQRQVLFLFLF---WGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRV 66
           R  QVL L L    WG + A     RYS+ EE EKGSFV N+ KDLGL   ELA  G R+
Sbjct: 10  RSEQVLLLTLLGTLWGAAAAQI---RYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRI 66

Query: 67  VSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDI 126
           VS    Q   L+   G+L+T  ++DRE+LC     C++ F IL++D   +Y  E+ + DI
Sbjct: 67  VSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDI 126

Query: 127 NDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSD 186
           ND++P F  +E+ +KI EN A  + F L    DPD G NS+Q + +S NS F + +    
Sbjct: 127 NDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEA 186

Query: 187 EGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQAL 246
            G  YPELVL+  LDRE +    L LTA+DGG P RS  + I + VLDVNDN P F Q +
Sbjct: 187 HGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPV 246

Query: 247 YETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLREL 306
           Y    PEN PVG+ ++ V+A D D GV+ EV+YSF   +E I   F +N  +GEI     
Sbjct: 247 YRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSAN 306

Query: 307 LDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS-PGIVL 365
           LDYE  + Y++ ++A DG GL  R  VLI +LD NDN PE++++S S ++AE++ PG V+
Sbjct: 307 LDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVI 366

Query: 366 AVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTD 425
           A+F++ DRDSG NG   C +  +LPF L+ SV N+Y L+T  ALDRE    YNIT+T TD
Sbjct: 367 ALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATD 426

Query: 426 LGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
            GTP L TE  I+L V+D NDN P F  +SY+++V ENN     I SV+A D D   NAQ
Sbjct: 427 KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQ 486

Query: 486 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEA 545
           V+YSL        PL+S VSIN+D G L+ALRS DYE L+     V ASD G P LSS  
Sbjct: 487 VSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNV 546

Query: 546 LVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 604
            + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 547 SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY 606

Query: 605 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVD 664
           +LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D
Sbjct: 607 RLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 666

Query: 665 GFSQPYLPLPEAAPAQAQADL-LTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR--- 718
                   L    P+    D  LT+YLVVA+A+VS +FL  V++ +A+RL R  +SR   
Sbjct: 667 RIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQ 726

Query: 719 AASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
           A+  G  S+P      H V V G     Q+Y +EV LT  S      F +P
Sbjct: 727 ASGGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  647 bits (1668), Expect = 0.0
 Identities = 359/752 (47%), Positives = 474/752 (63%), Gaps = 12/752 (1%)

Query: 26  AGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLL 85
           AG+G   YSV EET+KGSFV N+AKDLGL   ELA  G R+VS        L+  +G+L+
Sbjct: 26  AGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLI 85

Query: 86  TNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISEN 145
           T  ++DRE+LC    PC++ F IL++D  +++  E+ + DIND++P F+ +E+  K++E 
Sbjct: 86  TARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEI 145

Query: 146 TAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQ 205
           T  GT   L   QD D G NS+Q+Y +SSN  F + +    +G  +PE+VL   LDREE+
Sbjct: 146 TTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPLDREEE 205

Query: 206 EELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVS 265
               L LTA DGG P RSGT  I I V+D NDN P F QA Y    PEN P+G+ ++ V+
Sbjct: 206 AVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGTQLLMVN 265

Query: 266 AGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGG 325
           A D D G N EV+YSF +    +   F+++ ++GEI  +E LD+E    Y + +QA DG 
Sbjct: 266 ATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSMEVQAQDGA 325

Query: 326 GLSARCTVLIKVLDSNDNPPELIISSLSNSVAEN-SPGIVLAVFKIKDRDSGENGKTICY 384
           GL A+  VLIKVLD NDN PE+ I+S++ +V EN  PG ++A+  + D+DSG+NG T C+
Sbjct: 326 GLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCF 385

Query: 385 VQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDV 444
           +  NLPF L+  VDN+Y L+TE  LDRE  + YNITIT  D GTP L TE  I+L V+D+
Sbjct: 386 IPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDI 445

Query: 445 NDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLV 504
           NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL+       PL++ +
Sbjct: 446 NDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAYL 505

Query: 505 SINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP 564
           SIN+D G L+ALRS DYE  +    +V A D G P LSS   + + +LD NDN+P +LYP
Sbjct: 506 SINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNAPEILYP 565

Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
            L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GE
Sbjct: 566 ALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGE 625

Query: 624 VRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQA 683
           VRTAR L +RDA K  LVV V+D+G+PP SAT TL V + D  S     L    P+    
Sbjct: 626 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLEPSAKPN 685

Query: 684 DL-LTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLV 737
           D  LT+YLVVA A+VS +FL  V++ +A RL R  +SR   A+  G  S+P      H V
Sbjct: 686 DSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMP----GSHFV 741

Query: 738 DVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
            V G     Q+Y +EV LT  S      F +P
Sbjct: 742 GVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  643 bits (1658), Expect = 0.0
 Identities = 355/745 (47%), Positives = 474/745 (63%), Gaps = 12/745 (1%)

Query: 33  YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDR 92
           YSV+EET+KGSFV ++AKDLGL   ELA RG R++S    Q   L+  +G+L+T  ++DR
Sbjct: 33  YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 92

Query: 93  EKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAF 152
           E++C     C++ F ILM+D   +Y  ++ + DIND+ P F  +E+ +KI ENTA G  F
Sbjct: 93  EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152

Query: 153 RLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTL 212
            L  A DPD G NS+Q+Y +S N  F + +   D+   YPELVL++ LDREE+    L L
Sbjct: 153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212

Query: 213 TALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADSG 272
           TA DGG P RS T+ I++ V+DVND+ P F+   Y+   PEN PVG+ ++ V A D D G
Sbjct: 213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272

Query: 273 VNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCT 332
           VN EV+YSF   +  +   F +N  +GEI   E LDYE    Y++ +QA DG G   +  
Sbjct: 273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332

Query: 333 VLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGKTICYVQDNLPF 391
           VLI VLD NDN PE+ ++SLS+S+ E++P G V+A+F ++DRDSG+NG+  C + +NLPF
Sbjct: 333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392

Query: 392 FLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAF 451
            L+ S+DN+Y L+T   LDRE+ + YNIT+  TD GTP L  E  I +QV+D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452

Query: 452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
             +SY++++ ENN     I  V+A D DS  NAQ+TYSL        P++S VSIN+D G
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512

Query: 512 HLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGSA 570
            L+AL+S DYE L+    RV A D G P LSS   + + VLD NDN P +LYP L    +
Sbjct: 513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572

Query: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
              EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF V  + GEVRTAR L
Sbjct: 573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632

Query: 631 SERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADL-LTVY 689
            +RDA K  LVV V+D+G+PP SAT TL V + D   +    L    P+    +  LT+Y
Sbjct: 633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYDLTLY 692

Query: 690 LVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVSGTGT 744
           LVVA+A+VS +FL  VL+ +A+RL R  +SR   A+  G  +VP      H V + G   
Sbjct: 693 LVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQA 748

Query: 745 LFQSYQYEVCLTGGSETGEFKFLKP 769
             Q+Y +EV LT  S      F +P
Sbjct: 749 FLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score =  643 bits (1658), Expect = 0.0
 Identities = 355/745 (47%), Positives = 474/745 (63%), Gaps = 12/745 (1%)

Query: 33  YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDR 92
           YSV+EET+KGSFV ++AKDLGL   ELA RG R++S    Q   L+  +G+L+T  ++DR
Sbjct: 33  YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 92

Query: 93  EKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHSPVFRHKEMVLKISENTAEGTAF 152
           E++C     C++ F ILM+D   +Y  ++ + DIND+ P F  +E+ +KI ENTA G  F
Sbjct: 93  EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152

Query: 153 RLERAQDPDEGHNSIQNYTISSNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTL 212
            L  A DPD G NS+Q+Y +S N  F + +   D+   YPELVL++ LDREE+    L L
Sbjct: 153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212

Query: 213 TALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALYETQAPENSPVGSLIVKVSAGDADSG 272
           TA DGG P RS T+ I++ V+DVND+ P F+   Y+   PEN PVG+ ++ V A D D G
Sbjct: 213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272

Query: 273 VNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCT 332
           VN EV+YSF   +  +   F +N  +GEI   E LDYE    Y++ +QA DG G   +  
Sbjct: 273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332

Query: 333 VLIKVLDSNDNPPELIISSLSNSVAENSP-GIVLAVFKIKDRDSGENGKTICYVQDNLPF 391
           VLI VLD NDN PE+ ++SLS+S+ E++P G V+A+F ++DRDSG+NG+  C + +NLPF
Sbjct: 333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392

Query: 392 FLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAF 451
            L+ S+DN+Y L+T   LDRE+ + YNIT+  TD GTP L  E  I +QV+D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452

Query: 452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
             +SY++++ ENN     I  V+A D DS  NAQ+TYSL        P++S VSIN+D G
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512

Query: 512 HLFALRSLDYEALQAFDFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGSA 570
            L+AL+S DYE L+    RV A D G P LSS   + + VLD NDN P +LYP L    +
Sbjct: 513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572

Query: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
              EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF V  + GEVRTAR L
Sbjct: 573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632

Query: 631 SERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQADL-LTVY 689
            +RDA K  LVV V+D+G+PP SAT TL V + D   +    L    P+    +  LT+Y
Sbjct: 633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYDLTLY 692

Query: 690 LVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVSGTGT 744
           LVVA+A+VS +FL  VL+ +A+RL R  +SR   A+  G  +VP      H V + G   
Sbjct: 693 LVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQA 748

Query: 745 LFQSYQYEVCLTGGSETGEFKFLKP 769
             Q+Y +EV LT  S      F +P
Sbjct: 749 FLQTYSHEVSLTADSRKSHLIFPQP 773


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score =  641 bits (1653), Expect = 0.0
 Identities = 357/772 (46%), Positives = 486/772 (62%), Gaps = 19/772 (2%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFG----RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTR 65
           R R +L L +F G      GF     RYSV EETEKGSFV N++KDLGL   ELA RG R
Sbjct: 10  RSRLLLLLCIFLGTL---RGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66

Query: 66  VVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRD 125
           +VS    Q   ++  +G+L+T  ++DRE+LC     C L  ++L++D  +IY  E+ + D
Sbjct: 67  IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126

Query: 126 INDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGS 185
           IND++P F+  E+ +K+SE+   G  F L  A+DPD G NS+Q+Y +S N++F +++ G 
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186

Query: 186 DEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQA 245
            +G   PELVL+ +LDRE++    L LTALDGG P R G   IR+VVLDVND+ P F Q+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246

Query: 246 LYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRE 305
           +Y    PEN   G+ ++ V+A D D G+N EV YSF +        FQ++  +GE+ +R 
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306

Query: 306 LLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS-PGIV 364
            LD+E    Y++ IQ  DGGGL    T+LI V+D NDN PE+ I+S  NS+ ENS PG V
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366

Query: 365 LAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVT 424
           +A+  ++D+DSGENG+  C++ ++LPF L+ +  N+Y L+T   LDRE    YNIT+T T
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426

Query: 425 DLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA 484
           D G+P L  E  + L V+D NDN P F  +SY+ ++ ENN     I SV+A D DS  NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486

Query: 485 QVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSE 544
            VTYSL       +PL+S VSIN++ G L+AL+S DYE  +  + RV A D G P LSS 
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546

Query: 545 ALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS 603
             + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606

Query: 604 YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLV 663
           Y+LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + 
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666

Query: 664 DGFSQPYLPLPE-AAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR-- 718
           D   +    L    + A ++   L++YLVVA+A+VS +FL+ V++ +A+RL R  +SR  
Sbjct: 667 DSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLL 726

Query: 719 -AASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
            A+  G   +P      H V V G     Q+Y +EV L   S+     F +P
Sbjct: 727 QASEGGLAGMP----TSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQP 774


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score =  641 bits (1653), Expect = 0.0
 Identities = 357/772 (46%), Positives = 486/772 (62%), Gaps = 19/772 (2%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFG----RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTR 65
           R R +L L +F G      GF     RYSV EETEKGSFV N++KDLGL   ELA RG R
Sbjct: 10  RSRLLLLLCIFLGTL---RGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66

Query: 66  VVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRD 125
           +VS    Q   ++  +G+L+T  ++DRE+LC     C L  ++L++D  +IY  E+ + D
Sbjct: 67  IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126

Query: 126 INDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHIKISGS 185
           IND++P F+  E+ +K+SE+   G  F L  A+DPD G NS+Q+Y +S N++F +++ G 
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186

Query: 186 DEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQA 245
            +G   PELVL+ +LDRE++    L LTALDGG P R G   IR+VVLDVND+ P F Q+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246

Query: 246 LYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRE 305
           +Y    PEN   G+ ++ V+A D D G+N EV YSF +        FQ++  +GE+ +R 
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306

Query: 306 LLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS-PGIV 364
            LD+E    Y++ IQ  DGGGL    T+LI V+D NDN PE+ I+S  NS+ ENS PG V
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366

Query: 365 LAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVT 424
           +A+  ++D+DSGENG+  C++ ++LPF L+ +  N+Y L+T   LDRE    YNIT+T T
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426

Query: 425 DLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA 484
           D G+P L  E  + L V+D NDN P F  +SY+ ++ ENN     I SV+A D DS  NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486

Query: 485 QVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSE 544
            VTYSL       +PL+S VSIN++ G L+AL+S DYE  +  + RV A D G P LSS 
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546

Query: 545 ALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS 603
             + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606

Query: 604 YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLV 663
           Y+LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL V + 
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666

Query: 664 DGFSQPYLPLPE-AAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR-- 718
           D   +    L    + A ++   L++YLVVA+A+VS +FL+ V++ +A+RL R  +SR  
Sbjct: 667 DSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLL 726

Query: 719 -AASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKP 769
            A+  G   +P      H V V G     Q+Y +EV L   S+     F +P
Sbjct: 727 QASEGGLAGMP----TSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQP 774


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,527,937
Number of Sequences: 37866
Number of extensions: 1398515
Number of successful extensions: 10145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2963
Number of HSP's gapped (non-prelim): 638
length of query: 797
length of database: 18,247,518
effective HSP length: 110
effective length of query: 687
effective length of database: 14,082,258
effective search space: 9674511246
effective search space used: 9674511246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.