PCDHGA5 689

Name: PCDHGA5	Sequence: fasta or formatted (931aa)		NCBI GI: 11056024
Description: protocadherin gamma subfamily A, 5 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [813aa] protocadherin gamma subfamily A, 5 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 70 3 C cysteine 0.9 8 1 D aspartate 7.2 67 2 E glutamate 6.3 59 3 F phenylalanine 3.1 29 1 G glycine 7.3 68 3 H histidine 1.6 15 1 I isoleucine 3.4 32 2 K lysine 3.5 33 3 L leucine 11.5 107 3 M methionine 1.2 11 1 N asparagine 4.9 46 2 P proline 6.0 56 2 Q glutamine 3.4 32 2 R arginine 4.9 46 2 S serine 9.0 84 2 T threonine 6.3 59 2 V valine 8.4 78 3 W tryptophan 0.6 6 1 Y tyrosine 2.7 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA5 0.860 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA4 0.754 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA6 0.750 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA3 0.749 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA1 0.749 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA2 0.748 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA7 0.745 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA10 0.745 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA8 0.744 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA12 0.740 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA11 0.731 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA9 0.725 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA4 0.614 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA6 0.611 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA3 0.610 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA1 0.609 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA2 0.608 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA10 0.607 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA7 0.607 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA8 0.606 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA12 0.600 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA11 0.597 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA9 0.588 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGB5 0.504 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB7 0.498 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB1 0.496 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGB2 0.493 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB6 0.491 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB4 0.491 protocadherin gamma subfamily B, 4 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.