PCDHB5 35810

Name: PCDHB5	Sequence: fasta or formatted (795aa)		NCBI GI: 7661662
Description: protocadherin beta 5 precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 71 2 C cysteine 1.0 8 1 D aspartate 5.7 45 1 E glutamate 6.4 51 2 F phenylalanine 4.0 32 2 G glycine 6.4 51 3 H histidine 1.9 15 1 I isoleucine 3.1 25 2 K lysine 3.1 25 1 L leucine 12.5 99 4 M methionine 1.1 9 1 N asparagine 5.0 40 2 P proline 6.4 51 2 Q glutamine 3.6 29 1 R arginine 4.7 37 2 S serine 7.3 58 2 T threonine 6.9 55 3 V valine 8.6 68 4 W tryptophan 0.4 3 1 Y tyrosine 2.9 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin beta 5 precursor PCDHB6 0.772 protocadherin beta 6 precursor PCDHB4 0.771 protocadherin beta 4 precursor PCDHB15 0.757 protocadherin beta 15 precursor PCDHB3 0.754 protocadherin beta 3 precursor PCDHB16 0.749 protocadherin beta 16 precursor PCDHB14 0.748 protocadherin beta 14 precursor PCDHB2 0.740 protocadherin beta 2 precursor PCDHB12 0.735 protocadherin beta 12 precursor PCDHB11 0.735 protocadherin beta 11 precursor PCDHB8 0.729 protocadherin beta 8 precursor PCDHB7 0.726 protocadherin beta 7 precursor PCDHB13 0.721 protocadherin beta 13 precursor PCDHB9 0.715 protocadherin beta 9 precursor PCDHB10 0.711 protocadherin beta 10 precursor PCDHB1 0.486 protocadherin beta 1 precursor PCDHGA1 0.403 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA1 0.403 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA9 0.401 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.401 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGA12 0.399 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.399 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA10 0.395 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.395 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA2 0.394 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.394 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGB5 0.392 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.392 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGA5 0.392 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA5 0.392 protocadherin gamma subfamily A, 5 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.