Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DMPK Sequence: fasta or formatted (639aa) NCBI GI: 126091095
Description:

myotonic dystrophy protein kinase isoform 1

Referenced in:

Muscle
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [625aa] myotonic dystrophy protein kinase isoform 4
alt prot [624aa] myotonic dystrophy protein kinase isoform 3
alt prot [629aa] myotonic dystrophy protein kinase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         60           3
 C cysteine            1.4          9           1
 D aspartate           5.5         35           2
 E glutamate           8.5         54           3
 F phenylalanine       4.2         27           3
 G glycine             8.9         57           3
 H histidine           2.3         15           1
 I isoleucine          2.7         17           1
 K lysine              2.2         14           1
 L leucine            10.6         68           3
 M methionine          2.5         16           1
 N asparagine          1.3          8           1
 P proline             8.0         51           2
 Q glutamine           3.3         21           1
 R arginine            7.5         48           2
 S serine              5.2         33           2
 T threonine           4.5         29           2
 V valine              8.0         51           2
 W tryptophan          1.4          9           2
 Y tyrosine            2.7         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotonic dystrophy protein kinase isoform 1 
DMPK                  0.892   myotonic dystrophy protein kinase isoform 2 
DMPK                  0.879   myotonic dystrophy protein kinase isoform 3 
DMPK                  0.755   myotonic dystrophy protein kinase isoform 4 
CDC42BPA              0.355   CDC42-binding protein kinase alpha isoform B 
CDC42BPA              0.355   CDC42-binding protein kinase alpha isoform A 
CDC42BPG              0.347   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
CDC42BPB              0.343   CDC42-binding protein kinase beta 
ROCK1                 0.254   Rho-associated, coiled-coil containing protein kinase...
ROCK2                 0.249   Rho-associated, coiled-coil containing protein kinas...
CIT                   0.229   citron 
STK38L                0.196   serine/threonine kinase 38 like 
STK38                 0.195   serine/threonine kinase 38 
MAST3                 0.151   microtubule associated serine/threonine kinase 3 [H...
MAST2                 0.151   microtubule associated serine/threonine kinase 2 [H...
MAST1                 0.147   microtubule associated serine/threonine kinase 1 [Ho...
MAST4                 0.144   microtubule associated serine/threonine kinase fami...
PRKCH                 0.134   protein kinase C, eta 
RPS6KA6               0.134   ribosomal protein S6 kinase polypeptide 6 
PRKACG                0.134   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
PRKCE                 0.134   protein kinase C, epsilon 
PRKACA                0.134   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.134   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACB                0.133   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACB                0.133   cAMP-dependent protein kinase catalytic subunit beta...
SGK3                  0.129   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.129   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK1                  0.129   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.129   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.129   serum/glucocorticoid regulated kinase 1 isoform 3 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press