Guide to the Human Genome
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Name: ADRA1A Sequence: fasta or formatted (429aa) NCBI GI: 111118988
Description:

alpha-1A-adrenergic receptor isoform 3

Referenced in:

Catecholamines

Other entries for this name:
alt prot [475aa] alpha-1A-adrenergic receptor isoform 2
alt prot [455aa] alpha-1A-adrenergic receptor isoform 4
alt prot [466aa] alpha-1A-adrenergic receptor isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         28           2
 C cysteine            4.0         17           2
 D aspartate           2.6         11           1
 E glutamate           3.0         13           2
 F phenylalanine       5.6         24           2
 G glycine             7.0         30           2
 H histidine           2.3         10           1
 I isoleucine          7.5         32           2
 K lysine              5.1         22           2
 L leucine            10.5         45           3
 M methionine          2.1          9           1
 N asparagine          2.6         11           1
 P proline             5.4         23           2
 Q glutamine           2.8         12           1
 R arginine            5.1         22           2
 S serine              9.3         40           2
 T threonine           5.1         22           2
 V valine              8.6         37           2
 W tryptophan          1.6          7           1
 Y tyrosine            3.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-1A-adrenergic receptor isoform 3 
ADRA1A                0.983   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.983   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.983   alpha-1A-adrenergic receptor isoform 2 
ADRA1B                0.505   alpha-1B-adrenergic receptor 
ADRA1D                0.482   alpha-1D-adrenergic receptor 
HTR7                  0.231   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.230   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.230   5-hydroxytryptamine receptor 7 isoform a 
HTR1B                 0.228   5-hydroxytryptamine (serotonin) receptor 1B 
ADRB1                 0.221   beta-1-adrenergic receptor 
ADRB2                 0.220   adrenergic, beta-2-, receptor, surface 
HTR1F                 0.218   5-hydroxytryptamine (serotonin) receptor 1F 
HTR1D                 0.217   5-hydroxytryptamine (serotonin) receptor 1D 
DRD1                  0.215   dopamine receptor D1 
ADRB3                 0.209   adrenergic, beta-3-, receptor 
HTR1E                 0.208   5-hydroxytryptamine (serotonin) receptor 1E 
DRD5                  0.208   dopamine receptor D5 
HRH2                  0.208   histamine receptor H2 isoform 1 
HRH2                  0.208   histamine receptor H2 isoform 2 
DRD3                  0.204   dopamine receptor D3 isoform e 
HTR5A                 0.200   5-hydroxytryptamine receptor 5A 
DRD3                  0.192   dopamine receptor D3 isoform a 
DRD2                  0.181   dopamine receptor D2 isoform short 
HTR4                  0.179   serotonin 5-HT4 receptor isoform a 
HTR4                  0.176   serotonin 5-HT4 receptor isoform n 
HTR4                  0.176   serotonin 5-HT4 receptor isoform i 
HTR4                  0.176   serotonin 5-HT4 receptor isoform d 
HTR4                  0.176   serotonin 5-HT4 receptor isoform g 
HTR4                  0.176   serotonin 5-HT4 receptor isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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