Guide to the Human Genome
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Name: HRH1 Sequence: fasta or formatted (487aa) NCBI GI: 149158709
Description:

histamine receptor H1

Referenced in:

Histamine

Other entries for this name:
alt mRNA [487aa] histamine receptor H1
alt mRNA [487aa] histamine receptor H1
alt mRNA [487aa] histamine receptor H1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         25           3
 C cysteine            2.7         13           2
 D aspartate           4.1         20           2
 E glutamate           4.3         21           1
 F phenylalanine       4.9         24           2
 G glycine             4.9         24           3
 H histidine           2.5         12           1
 I isoleucine          5.7         28           2
 K lysine              6.8         33           2
 L leucine            11.3         55           2
 M methionine          3.7         18           1
 N asparagine          3.9         19           1
 P proline             4.5         22           1
 Q glutamine           3.3         16           2
 R arginine            5.5         27           2
 S serine              8.8         43           2
 T threonine           5.5         27           3
 V valine              6.4         31           3
 W tryptophan          2.3         11           1
 Y tyrosine            3.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histamine receptor H1 
HRH1                  1.000   histamine receptor H1 
HRH1                  1.000   histamine receptor H1 
HRH1                  1.000   histamine receptor H1 
CHRM5                 0.174   cholinergic receptor, muscarinic 5 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM2                 0.169   cholinergic receptor, muscarinic 2 
CHRM4                 0.165   cholinergic receptor, muscarinic 4 
CHRM1                 0.165   cholinergic receptor, muscarinic 1 
CHRM3                 0.162   cholinergic receptor, muscarinic 3 
ADRA2C                0.134   alpha-2C-adrenergic receptor 
DRD2                  0.128   dopamine receptor D2 isoform long 
ADRA2A                0.127   alpha-2A-adrenergic receptor 
ADRA2B                0.116   alpha-2B-adrenergic receptor 
HTR1E                 0.104   5-hydroxytryptamine (serotonin) receptor 1E 
HTR1B                 0.100   5-hydroxytryptamine (serotonin) receptor 1B 
HRH2                  0.099   histamine receptor H2 isoform 1 
HRH2                  0.099   histamine receptor H2 isoform 2 
ADRB2                 0.097   adrenergic, beta-2-, receptor, surface 
HTR1D                 0.096   5-hydroxytryptamine (serotonin) receptor 1D 
HTR1F                 0.096   5-hydroxytryptamine (serotonin) receptor 1F 
HTR1A                 0.092   5-hydroxytryptamine (serotonin) receptor 1A 
ADRA1A                0.091   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.091   alpha-1A-adrenergic receptor isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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