Search of human proteins with 9665234

Search of human proteins with 9665234

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9665234 interleukin 1 family, member 9 [Homo sapiens]              349   7e-97
gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]    183   5e-47
gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]   137   6e-33
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]    89   2e-18
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ...    89   2e-18
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]    89   2e-18
gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo sapiens]    79   2e-15
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]    76   2e-14
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]    76   2e-14
gi|27894307 interleukin 1 family, member 10 [Homo sapiens]             70   9e-13
gi|27894304 interleukin 1 family, member 10 [Homo sapiens]             70   9e-13
gi|27894310 interleukin 1 family, member 5 [Homo sapiens]              70   1e-12
gi|6912432 interleukin 1 family, member 5 [Homo sapiens]               70   1e-12
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa...    65   4e-11
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso...    65   4e-11
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa...    65   4e-11
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa...    65   4e-11
gi|10835145 interleukin 1, beta proprotein [Homo sapiens]              46   2e-05
gi|66933014 3-hydroxybutyrate dehydrogenase, type 2 [Homo sapiens]     28   3.8  
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    28   4.9  
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    28   4.9  
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    28   4.9  
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho...    28   4.9  
gi|4759026 RAS protein activator like 1 [Homo sapiens]                 27   8.4  
gi|189217881 carcinoembryonic antigen-related cell adhesion mole...    27   8.4  
gi|45267817 carcinoembryonic antigen-related cell adhesion molec...    27   8.4  

>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
          Length = 169

 Score =  349 bits (895), Expect = 7e-97
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT 60
           MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
Sbjct: 1   MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT 60

Query: 61  CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY 120
           CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
Sbjct: 61  CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY 120

Query: 121 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND 169
           RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND
Sbjct: 121 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND 169


>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
          Length = 158

 Score =  183 bits (465), Expect = 5e-47
 Identities = 88/147 (59%), Positives = 112/147 (76%), Gaps = 1/147 (0%)

Query: 22  PITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQN 81
           P  G+I D+N +VW LQ Q L+AVPR D ++PVT+A+I+C++ E LE+ RG+PIYLG+  
Sbjct: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNG 69

Query: 82  PEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIA 141
             +CL C KVG+QPTLQLKE+ IMDLY QPEPVK FLFY +++GR ST ESVAFP WFIA
Sbjct: 70  LNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIA 129

Query: 142 -SSKRDQPIILTSELGKSYNTAFELNI 167
            SS+   P+ILT ELGK+  T F L +
Sbjct: 130 VSSEGGCPLILTQELGKANTTDFGLTM 156


>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
          Length = 157

 Score =  137 bits (344), Expect = 6e-33
 Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)

Query: 17  QSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIY 76
           Q    P +  I D  Q VW L G +L+A P S S+ PVT+ +I C+  E  ++ +G+ +Y
Sbjct: 4   QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVY 63

Query: 77  LGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFP 136
           LGI+  ++CL+C ++  +PTLQLKE+ IMDLY + +  KPFLF+  K G TS  +SV++P
Sbjct: 64  LGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYP 123

Query: 137 DWFIASSKRD-QPIILTSELGKSYNTAFELN 166
            WFIA+S    QPI LT E G + NT F L+
Sbjct: 124 GWFIATSTTSGQPIFLTKERGITNNTNFYLD 154


>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
          Length = 197

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 5/133 (3%)

Query: 26  TINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMC 85
           +I+D + +V  L   NL+AVP  + + P     +      A  + +G PI LG+   E C
Sbjct: 40  SIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSASAE-KGSPILLGVSKGEFC 98

Query: 86  LYCEKVGEQ--PTLQLKEQKIMDLYGQPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIAS 142
           LYC+K   Q  P+LQLK++K+M L  Q E  + PF+FYRA+ G  + LES A P WFI +
Sbjct: 99  LYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGWFICT 158

Query: 143 S-KRDQPIILTSE 154
           S   ++P+ +T +
Sbjct: 159 SCNCNEPVGVTDK 171


>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
           [Homo sapiens]
          Length = 218

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 5/133 (3%)

Query: 26  TINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMC 85
           +I+D + +V  L   NL+AVP  + + P     +      A  + +G PI LG+   E C
Sbjct: 61  SIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSASAE-KGSPILLGVSKGEFC 119

Query: 86  LYCEKVGEQ--PTLQLKEQKIMDLYGQPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIAS 142
           LYC+K   Q  P+LQLK++K+M L  Q E  + PF+FYRA+ G  + LES A P WFI +
Sbjct: 120 LYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGWFICT 179

Query: 143 S-KRDQPIILTSE 154
           S   ++P+ +T +
Sbjct: 180 SCNCNEPVGVTDK 192


>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
          Length = 192

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 5/133 (3%)

Query: 26  TINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMC 85
           +I+D + +V  L   NL+AVP  + + P     +      A  + +G PI LG+   E C
Sbjct: 35  SIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSASAE-KGSPILLGVSKGEFC 93

Query: 86  LYCEKVGEQ--PTLQLKEQKIMDLYGQPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIAS 142
           LYC+K   Q  P+LQLK++K+M L  Q E  + PF+FYRA+ G  + LES A P WFI +
Sbjct: 94  LYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGWFICT 153

Query: 143 S-KRDQPIILTSE 154
           S   ++P+ +T +
Sbjct: 154 SCNCNEPVGVTDK 166


>gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo sapiens]
          Length = 164

 Score = 78.6 bits (192), Expect = 2e-15
 Identities = 37/94 (39%), Positives = 57/94 (60%)

Query: 17  QSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIY 76
           Q    P +  I D  Q VW L G +L+A P S S+ PVT+ +I C+  E  ++ +G+ +Y
Sbjct: 4   QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVY 63

Query: 77  LGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQ 110
           LGI+  ++CL+C ++  +PTLQLK Q   D  G+
Sbjct: 64  LGIKGKDLCLFCAEIQGKPTLQLKLQGSQDNIGK 97


>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
          Length = 178

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 71  RGDPIYLGIQNPEMCLYCEKVGEQ--PTLQLKEQKIMDLYGQPEPVK-PFLFYRAKTGRT 127
           +G PI LG+   E CLYC+K   Q  P+LQLK++K+M L  Q E  + PF+FYRA+ G  
Sbjct: 65  KGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSW 124

Query: 128 STLESVAFPDWFIASS-KRDQPIILTSE 154
           + LES A P WFI +S   ++P+ +T +
Sbjct: 125 NMLESAAHPGWFICTSCNCNEPVGVTDK 152


>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
          Length = 157

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 71  RGDPIYLGIQNPEMCLYCEKVGEQ--PTLQLKEQKIMDLYGQPEPVK-PFLFYRAKTGRT 127
           +G PI LG+   E CLYC+K   Q  P+LQLK++K+M L  Q E  + PF+FYRA+ G  
Sbjct: 44  KGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSW 103

Query: 128 STLESVAFPDWFIASS-KRDQPIILTSE 154
           + LES A P WFI +S   ++P+ +T +
Sbjct: 104 NMLESAAHPGWFICTSCNCNEPVGVTDK 131


>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score = 70.1 bits (170), Expect = 9e-13
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 34  VWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGE 93
           ++T  GQ LV  P +D+     + ++    P         PI+LGIQ    CL C +  E
Sbjct: 20  LYTRDGQLLVGDPVADNCCAEKICIL----PNRGLARTKVPIFLGIQGGSRCLACVETEE 75

Query: 94  QPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIAS-SKRDQPIILT 152
            P+LQL++  I +LY   E    F F+++ +G    LE+ A+P WF+   ++  QP+ LT
Sbjct: 76  GPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLT 135

Query: 153 SELGKSYNTAF 163
            E   S  T F
Sbjct: 136 KESEPSARTKF 146


>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score = 70.1 bits (170), Expect = 9e-13
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 34  VWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGE 93
           ++T  GQ LV  P +D+     + ++    P         PI+LGIQ    CL C +  E
Sbjct: 20  LYTRDGQLLVGDPVADNCCAEKICIL----PNRGLARTKVPIFLGIQGGSRCLACVETEE 75

Query: 94  QPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIAS-SKRDQPIILT 152
            P+LQL++  I +LY   E    F F+++ +G    LE+ A+P WF+   ++  QP+ LT
Sbjct: 76  GPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLT 135

Query: 153 SELGKSYNTAF 163
            E   S  T F
Sbjct: 136 KESEPSARTKF 146


>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score = 69.7 bits (169), Expect = 1e-12
 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 74  PIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESV 133
           P+ LG+Q    CL C  VG++PTL L+   IM+LY   +  K F FYR   G TS+ ES 
Sbjct: 56  PVILGVQGGSQCLSCG-VGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESA 114

Query: 134 AFPDWFIAS-SKRDQPIILT 152
           A+P WF+ +  + DQP+ LT
Sbjct: 115 AYPGWFLCTVPEADQPVRLT 134


>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score = 69.7 bits (169), Expect = 1e-12
 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 74  PIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESV 133
           P+ LG+Q    CL C  VG++PTL L+   IM+LY   +  K F FYR   G TS+ ES 
Sbjct: 56  PVILGVQGGSQCLSCG-VGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESA 114

Query: 134 AFPDWFIAS-SKRDQPIILT 152
           A+P WF+ +  + DQP+ LT
Sbjct: 115 AYPGWFLCTVPEADQPVRLT 134


>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
           sapiens]
          Length = 143

 Score = 64.7 bits (156), Expect = 4e-11
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 16/130 (12%)

Query: 29  DLNQQVWTLQGQNLVAV----PRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEM 84
           D+NQ+ + L+   LVA     P  +    + V  I    P AL        +LGI   +M
Sbjct: 8   DVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIE---PHAL--------FLGIHGGKM 56

Query: 85  CLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIASS- 143
           CL C K G++  LQL+   I DL    +  K F F R+ +G T++ ES A P WF+ ++ 
Sbjct: 57  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 116

Query: 144 KRDQPIILTS 153
           + DQP+ LT+
Sbjct: 117 EADQPVSLTN 126


>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
           [Homo sapiens]
          Length = 177

 Score = 64.7 bits (156), Expect = 4e-11
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 16/130 (12%)

Query: 29  DLNQQVWTLQGQNLVAV----PRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEM 84
           D+NQ+ + L+   LVA     P  +    + V  I    P AL        +LGI   +M
Sbjct: 42  DVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIE---PHAL--------FLGIHGGKM 90

Query: 85  CLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIASS- 143
           CL C K G++  LQL+   I DL    +  K F F R+ +G T++ ES A P WF+ ++ 
Sbjct: 91  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 150

Query: 144 KRDQPIILTS 153
           + DQP+ LT+
Sbjct: 151 EADQPVSLTN 160


>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
           sapiens]
          Length = 180

 Score = 64.7 bits (156), Expect = 4e-11
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 16/130 (12%)

Query: 29  DLNQQVWTLQGQNLVAV----PRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEM 84
           D+NQ+ + L+   LVA     P  +    + V  I    P AL        +LGI   +M
Sbjct: 45  DVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIE---PHAL--------FLGIHGGKM 93

Query: 85  CLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIASS- 143
           CL C K G++  LQL+   I DL    +  K F F R+ +G T++ ES A P WF+ ++ 
Sbjct: 94  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 153

Query: 144 KRDQPIILTS 153
           + DQP+ LT+
Sbjct: 154 EADQPVSLTN 163


>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
           sapiens]
          Length = 159

 Score = 64.7 bits (156), Expect = 4e-11
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 16/130 (12%)

Query: 29  DLNQQVWTLQGQNLVAV----PRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEM 84
           D+NQ+ + L+   LVA     P  +    + V  I    P AL        +LGI   +M
Sbjct: 24  DVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIE---PHAL--------FLGIHGGKM 72

Query: 85  CLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIASS- 143
           CL C K G++  LQL+   I DL    +  K F F R+ +G T++ ES A P WF+ ++ 
Sbjct: 73  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 132

Query: 144 KRDQPIILTS 153
           + DQP+ LT+
Sbjct: 133 EADQPVSLTN 142


>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
          Length = 269

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 2/152 (1%)

Query: 15  VYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDP 74
           V+ +  + +  T+ D  Q+   + G   +              V +  + +  E     P
Sbjct: 114 VHDAPVRSLNCTLRDSQQKSLVMSGPYELKALHLQGQDMEQQVVFSMSFVQGEESNDKIP 173

Query: 75  IYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVA 134
           + LG++   + L C    ++PTLQL+     + Y + +  K F+F + +       ES  
Sbjct: 174 VALGLKEKNLYLSCVLKDDKPTLQLESVDPKN-YPKKKMEKRFVFNKIEINNKLEFESAQ 232

Query: 135 FPDWFIASSK-RDQPIILTSELGKSYNTAFEL 165
           FP+W+I++S+  + P+ L    G    T F +
Sbjct: 233 FPNWYISTSQAENMPVFLGGTKGGQDITDFTM 264


>gi|66933014 3-hydroxybutyrate dehydrogenase, type 2 [Homo sapiens]
          Length = 245

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 88  CEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIASSK 144
           C    + P+LQ + Q      G PE  +     R KTGR +T E +A    ++AS +
Sbjct: 176 CPGTVDTPSLQERIQA----RGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
           sapiens]
          Length = 1972

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 15/110 (13%)

Query: 56  VAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLY--GQPEP 113
           +A +TC    ++     +  + G+      L+C  V     L +  +KI+D+Y   +   
Sbjct: 90  MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHE 149

Query: 114 VKPFLFYRAKTGRTSTLESVAFPDWFIASSKRDQPIILTSE--LGKSYNT 161
           + P ++  A T   S L+            + DQ I+ T E   GK+ NT
Sbjct: 150 MPPHIYAIADTAYRSMLQ-----------DREDQSILCTGESGAGKTENT 188


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
           sapiens]
          Length = 1979

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 15/110 (13%)

Query: 56  VAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLY--GQPEP 113
           +A +TC    ++     +  + G+      L+C  V     L +  +KI+D+Y   +   
Sbjct: 90  MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHE 149

Query: 114 VKPFLFYRAKTGRTSTLESVAFPDWFIASSKRDQPIILTSE--LGKSYNT 161
           + P ++  A T   S L+            + DQ I+ T E   GK+ NT
Sbjct: 150 MPPHIYAIADTAYRSMLQ-----------DREDQSILCTGESGAGKTENT 188


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
           sapiens]
          Length = 1945

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 15/110 (13%)

Query: 56  VAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLY--GQPEP 113
           +A +TC    ++     +  + G+      L+C  V     L +  +KI+D+Y   +   
Sbjct: 90  MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHE 149

Query: 114 VKPFLFYRAKTGRTSTLESVAFPDWFIASSKRDQPIILTSE--LGKSYNT 161
           + P ++  A T   S L+            + DQ I+ T E   GK+ NT
Sbjct: 150 MPPHIYAIADTAYRSMLQ-----------DREDQSILCTGESGAGKTENT 188


>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
           sapiens]
          Length = 1938

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 15/110 (13%)

Query: 56  VAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLY--GQPEP 113
           +A +TC    ++     +  + G+      L+C  V     L +  +KI+D+Y   +   
Sbjct: 90  MAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHE 149

Query: 114 VKPFLFYRAKTGRTSTLESVAFPDWFIASSKRDQPIILTSE--LGKSYNT 161
           + P ++  A T   S L+            + DQ I+ T E   GK+ NT
Sbjct: 150 MPPHIYAIADTAYRSMLQ-----------DREDQSILCTGESGAGKTENT 188


>gi|4759026 RAS protein activator like 1 [Homo sapiens]
          Length = 804

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 14/89 (15%)

Query: 64  PEALEQGRGDPIYLGIQNPE----MCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLF 119
           P+A  QG    I L +Q  E     CL C        L  ++    D+ G  +P    +F
Sbjct: 112 PDAEVQGE---ICLSVQMLEDGQGRCLRCH------VLHARDLAPRDISGTSDPFAR-VF 161

Query: 120 YRAKTGRTSTLESVAFPDWFIASSKRDQP 148
           + +++  TST++   FP W      R+ P
Sbjct: 162 WGSQSLETSTIKKTRFPHWDEVLELREMP 190


>gi|189217881 carcinoembryonic antigen-related cell adhesion
           molecule 19 isoform 1 [Homo sapiens]
          Length = 299

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 79  IQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY 120
           +Q  +  LY +K+ EQP  Q  +  ++ + G P+  + F +Y
Sbjct: 27  LQGSQAALYIQKIPEQP--QKNQDLLLSVQGVPDTFQDFNWY 66


>gi|45267817 carcinoembryonic antigen-related cell adhesion molecule
           19 isoform 2 [Homo sapiens]
          Length = 300

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 79  IQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY 120
           +Q  +  LY +K+ EQP  Q  +  ++ + G P+  + F +Y
Sbjct: 27  LQGSQAALYIQKIPEQP--QKNQDLLLSVQGVPDTFQDFNWY 66


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,924,685
Number of Sequences: 37866
Number of extensions: 303877
Number of successful extensions: 546
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 510
Number of HSP's gapped (non-prelim): 26
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.