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Search of human proteins with 9558751
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9558751 ADP-ribosylation factor binding protein 2 [Homo
sapiens]
(613 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens] 1234 0.0
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b... 519 e-147
gi|48527952 golgi associated, gamma adaptin ear containing, ARF ... 475 e-134
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 346 3e-95
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 276 5e-74
gi|239758145 PREDICTED: similar to ADP-ribosylation factor bindi... 261 1e-69
gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens] 102 1e-21
gi|191252812 target of myb1-like 1 [Homo sapiens] 95 2e-19
gi|209180457 target of myb1 isoform 2 [Homo sapiens] 82 1e-15
gi|4885637 target of myb1 isoform 1 [Homo sapiens] 82 1e-15
gi|71773010 adaptor-related protein complex 1, gamma 1 subunit i... 79 1e-14
gi|71772942 adaptor-related protein complex 1, gamma 1 subunit i... 79 1e-14
gi|48527954 golgi associated, gamma adaptin ear containing, ARF ... 72 1e-12
gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [H... 69 1e-11
gi|209180448 target of myb1 isoform 3 [Homo sapiens] 66 8e-11
gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens] 65 2e-10
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 64 5e-10
gi|209180450 target of myb1 isoform 4 [Homo sapiens] 60 5e-09
gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens] 59 1e-08
gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens] 50 6e-06
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 44 3e-04
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 37 0.053
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 36 0.12
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 36 0.12
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 36 0.12
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.16
gi|226442791 runt-related transcription factor 2 isoform b [Homo... 35 0.20
gi|226442783 runt-related transcription factor 2 isoform a [Homo... 35 0.20
gi|66934969 runt-related transcription factor 2 isoform c [Homo ... 35 0.20
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.26
>gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens]
Length = 613
Score = 1234 bits (3193), Expect = 0.0
Identities = 613/613 (100%), Positives = 613/613 (100%)
Query: 1 MAATAVAAAVAGTESAQGPPGPAASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGP 60
MAATAVAAAVAGTESAQGPPGPAASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGP
Sbjct: 1 MAATAVAAAVAGTESAQGPPGPAASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGP 60
Query: 61 THAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLG 120
THAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLG
Sbjct: 61 THAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLG 120
Query: 121 SWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWP 180
SWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWP
Sbjct: 121 SWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWP 180
Query: 181 KSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRS 240
KSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRS
Sbjct: 181 KSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRS 240
Query: 241 HVKVLQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQAN 300
HVKVLQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQAN
Sbjct: 241 HVKVLQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQAN 300
Query: 301 DLLTQGVLLYKQVMEGRVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ 360
DLLTQGVLLYKQVMEGRVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ
Sbjct: 301 DLLTQGVLLYKQVMEGRVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ 360
Query: 361 MGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLD 420
MGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLD
Sbjct: 361 MGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLD 420
Query: 421 LLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPLES 480
LLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPLES
Sbjct: 421 LLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPLES 480
Query: 481 VKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK 540
VKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK
Sbjct: 481 VKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK 540
Query: 541 SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE 600
SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE
Sbjct: 541 SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE 600
Query: 601 VKDFPDLAVLGAA 613
VKDFPDLAVLGAA
Sbjct: 601 VKDFPDLAVLGAA 613
>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 1 [Homo sapiens]
Length = 639
Score = 519 bits (1337), Expect = e-147
Identities = 300/632 (47%), Positives = 409/632 (64%), Gaps = 60/632 (9%)
Query: 25 SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT 84
+LE +N+AT+P E DW++I FCEQ+N D GP A LLAHKIQSPQE EA+ ALT
Sbjct: 9 TLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALT 68
Query: 85 VLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE 144
VLE CM CG++FH EV KFRFLNELIKV+SPKYLGS + KVK +++E+L+SWTV PE
Sbjct: 69 VLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPE 128
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHP 204
++KI +AYQMLKKQGI+K DPKLP D P P P PK+ IF+ DEEKSK+L RLLKS+HP
Sbjct: 129 EVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPRPKNVIFE-DEEKSKMLARLLKSSHP 187
Query: 205 EDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQEA 264
EDL+AAN+LIK +V+E+Q++ EK+SKRV+A+EEV ++VK+L EM+ + + G A E
Sbjct: 188 EDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSED 247
Query: 265 L-QVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFGNR 323
L + +Y+RCE++RPTLFRLASDT D+D+ALAEILQAND LTQ + LYKQ++ G G+
Sbjct: 248 LMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDA 307
Query: 324 VTSSLGD-----IPVSRVFQNPAGCMKTCPLIDLEV-DNGPAQMGTVVPSLLHQDLAALG 377
S+ + +S + PAG T P + + + + SLL +L +LG
Sbjct: 308 TAGSIPGSTSALLDLSGLDLPPAG--TTYPAMPTRPGEQASPEQPSASVSLLDDELMSLG 365
Query: 378 ISD-APVTGMV---SGQNCCE------------------EKRNPSSSTLPGGGVQNPSAD 415
+SD P +G +G N + E R P+ ++LP S+
Sbjct: 366 LSDPTPPSGPSLDGTGWNSFQSSDATEPPAPALAQAPSMESRPPAQTSLPA------SSG 419
Query: 416 RNLLDLL-------SAQPAPCPLNYVSQKSVPK------EVPPGTKSSPGWS-----WEA 457
+ LDLL S P + + Q+ P+ + + SSP S
Sbjct: 420 LDDLDLLGKTLLQQSLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCSSPSSSATSLLHTV 479
Query: 458 GPLAPSPSSQNTP----LAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPE 513
P P P Q P LA + VPLES+KPS++ P+ VYD++GFRIL HF++ PG +
Sbjct: 480 SPEPPRPPQQPVPTELSLASITVPLESIKPSNILPVTVYDQHGFRILFHFARDPLPGRSD 539
Query: 514 VQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLD 573
V V++++M+STAPQP+ +I+FQ AVPK M+VKLQP S ++LPAF+P++ P+ I+Q+LLL
Sbjct: 540 VLVVVVSMLSTAPQPIRNIVFQSAVPKVMKVKLQPPSGTELPAFNPIVHPSAITQVLLLA 599
Query: 574 NPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
NP KE +RLRYKLTF G Q ++E+G+V FP
Sbjct: 600 NPQKEKVRLRYKLTFTMGDQTYNEMGDVDQFP 631
>gi|48527952 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 2 [Homo sapiens]
Length = 552
Score = 475 bits (1222), Expect = e-134
Identities = 278/586 (47%), Positives = 371/586 (63%), Gaps = 55/586 (9%)
Query: 25 SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT 84
+LE +N+AT+P E DW++I FCEQ+N D GP A LLAHKIQSPQE EA+ ALT
Sbjct: 9 TLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALT 68
Query: 85 VLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE 144
VLE CM CG++FH EV KFRFLNELIKV+SPKYLGS + KVK +++E+L+SWTV PE
Sbjct: 69 VLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGLPE 128
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHP 204
++KI +AYQMLKKQGI+K DPKLP D P P P PK+ IF+ DEEKSK+L RLLKS+HP
Sbjct: 129 EVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPRPKNVIFE-DEEKSKMLARLLKSSHP 187
Query: 205 EDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQEA 264
EDL+AAN+LIK +V+E+Q++ EK+SKRV+A+EEV ++VK+L EM+ + + G A E
Sbjct: 188 EDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSED 247
Query: 265 L-QVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFGNR 323
L + +Y+RCE++RPTLFRLASDT D+D+AL L+ ++G T N
Sbjct: 248 LMKELYQRCERMRPTLFRLASDTEDNDEALG--------LSDPTPPSGPSLDG--TGWNS 297
Query: 324 VTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQMGTVVPSLLHQDLAALGISDAPV 383
SS P PA + P ++ PAQ T +P A+ G+ D +
Sbjct: 298 FQSSDATEP-------PAPALAQAPSME---SRPPAQ--TSLP-------ASSGLDDLDL 338
Query: 384 TGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSVPKEV 443
G Q P S Q P+ L DL N S S P
Sbjct: 339 LGKTLLQQSL-----PPESQQVRWEKQQPTPRLTLRDL---------QNKSSSCSSP--- 381
Query: 444 PPGTKSSPGWSWEAGPLAPSPSSQNTP----LAQVFVPLESVKPSSLPPLIVYDRNGFRI 499
+ S+ P P P Q P LA + VPLES+KPS++ P+ VYD++GFRI
Sbjct: 382 ---SSSATSLLHTVSPEPPRPPQQPVPTELSLASITVPLESIKPSNILPVTVYDQHGFRI 438
Query: 500 LLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSP 559
L HF++ PG +V V++++M+STAPQP+ +I+FQ AVPK M+VKLQP S ++LPAF+P
Sbjct: 439 LFHFARDPLPGRSDVLVVVVSMLSTAPQPIRNIVFQSAVPKVMKVKLQPPSGTELPAFNP 498
Query: 560 LMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFP 605
++ P+ I+Q+LLL NP KE +RLRYKLTF G Q ++E+G+V FP
Sbjct: 499 IVHPSAITQVLLLANPQKEKVRLRYKLTFTMGDQTYNEMGDVDQFP 544
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 346 bits (888), Expect = 3e-95
Identities = 207/476 (43%), Positives = 290/476 (60%), Gaps = 32/476 (6%)
Query: 25 SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT 84
SLE WLNKAT+PS ++DW I FC+Q+N + GP A LLAHKIQSPQE EAL ALT
Sbjct: 8 SLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALT 67
Query: 85 VLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE 144
VLE CM +CG +FH+EV KFRFLNELIKV+SPKYLG + KVK +VIE+L+SWT+ PE
Sbjct: 68 VLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALPE 127
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDK-ILPPPSPWPKSSIFDADEEKSKLLTRLLKSNH 203
+ KI+DAY MLK+QGI++ DP +PVD+ ++P P P PK+ +FD DEEKSKLL +LLKS +
Sbjct: 128 EAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFD-DEEKSKLLAKLLKSKN 186
Query: 204 PEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQE 263
P+DLQ AN+LIK++VKE++ + +KV+KR+ +EEV ++V++L EML Y + + D+E
Sbjct: 187 PDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGDRE 246
Query: 264 ALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFGNR 323
++ ++++CE R TLF+LAS+T D+D++L +ILQA+D L++ + YK ++EG+V G
Sbjct: 247 LMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEV 306
Query: 324 VTSSLGDIPVSRVFQNPAGCMKTCPLIDL-EVDNGPAQMGTVVPSLLHQDLAALGISDAP 382
T +L D + + C LIDL E+D + + P+ + GI P
Sbjct: 307 ATLTLPD------SEGNSQCSNQGTLIDLAELDTTNSLSSVLAPA---PTPPSSGIPILP 357
Query: 383 VTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSA--DRNLLDLLSAQPAPCPLNYVSQKSVP 440
SG + + +TL N + D LL L A PAP +VP
Sbjct: 358 PPPQASGPP-RSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAP---------NVP 407
Query: 441 KEVPPGTKSSPGWSWEAGPL---APSP-----SSQNTPLAQVFVPLESVKPSSLPP 488
+ G E L +P P + + PL Q P S + LPP
Sbjct: 408 PKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPP 463
Score = 166 bits (421), Expect = 4e-41
Identities = 90/181 (49%), Positives = 119/181 (65%), Gaps = 12/181 (6%)
Query: 443 VPPGTKSSPGWSWEAGPLAP-----SPSSQNTP-------LAQVFVPLESVKPSSLPPLI 490
+P T + P + GP +P S SQ +P LA + VPLES+KPSS P+
Sbjct: 541 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 600
Query: 491 VYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPAS 550
YD+NGFRIL HF++ PG P+V V++++M++TAP PV I+ Q AVPKSM+VKLQP S
Sbjct: 601 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 660
Query: 551 SSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVL 610
++L FSP+ PPA I+Q++LL NP KE +RLRYKLTF G Q +EVGEV FP +
Sbjct: 661 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 720
Query: 611 G 611
G
Sbjct: 721 G 721
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 276 bits (705), Expect = 5e-74
Identities = 182/476 (38%), Positives = 261/476 (54%), Gaps = 65/476 (13%)
Query: 25 SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT 84
SLE WLNKAT+PS ++DW I FC+Q+N + GP A LLAHKIQSPQE EAL ALT
Sbjct: 8 SLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALT 67
Query: 85 VLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE 144
YLG + KVK +VIE+L+SWT+ PE
Sbjct: 68 ---------------------------------YLGDRVSEKVKTKVIELLYSWTMALPE 94
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDK-ILPPPSPWPKSSIFDADEEKSKLLTRLLKSNH 203
+ KI+DAY MLK+QGI++ DP +PVD+ ++P P P PK+ +FD DEEKSKLL +LLKS +
Sbjct: 95 EAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFD-DEEKSKLLAKLLKSKN 153
Query: 204 PEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQE 263
P+DLQ AN+LIK++VKE++ + +KV+KR+ +EEV ++V++L EML Y + + D+E
Sbjct: 154 PDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGDRE 213
Query: 264 ALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFGNR 323
++ ++++CE R TLF+LAS+T D+D++L +ILQA+D L++ + YK ++EG+V G
Sbjct: 214 LMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEV 273
Query: 324 VTSSLGDIPVSRVFQNPAGCMKTCPLIDL-EVDNGPAQMGTVVPSLLHQDLAALGISDAP 382
T +L D + + C LIDL E+D + + P+ + GI P
Sbjct: 274 ATLTLPD------SEGNSQCSNQGTLIDLAELDTTNSLSSVLAPA---PTPPSSGIPILP 324
Query: 383 VTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSA--DRNLLDLLSAQPAPCPLNYVSQKSVP 440
SG + + +TL N + D LL L A PAP +VP
Sbjct: 325 PPPQASGPP-RSRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAP---------NVP 374
Query: 441 KEVPPGTKSSPGWSWEAGPL---APSP-----SSQNTPLAQVFVPLESVKPSSLPP 488
+ G E L +P P + + PL Q P S + LPP
Sbjct: 375 PKESAGNSQWHLLQREQSDLDFFSPRPGTAACGASDAPLLQPSAPSSSSSQAPLPP 430
Score = 166 bits (421), Expect = 4e-41
Identities = 90/181 (49%), Positives = 119/181 (65%), Gaps = 12/181 (6%)
Query: 443 VPPGTKSSPGWSWEAGPLAP-----SPSSQNTP-------LAQVFVPLESVKPSSLPPLI 490
+P T + P + GP +P S SQ +P LA + VPLES+KPSS P+
Sbjct: 508 IPTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPVT 567
Query: 491 VYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPAS 550
YD+NGFRIL HF++ PG P+V V++++M++TAP PV I+ Q AVPKSM+VKLQP S
Sbjct: 568 AYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPS 627
Query: 551 SSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVL 610
++L FSP+ PPA I+Q++LL NP KE +RLRYKLTF G Q +EVGEV FP +
Sbjct: 628 GTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFPPVEQW 687
Query: 611 G 611
G
Sbjct: 688 G 688
>gi|239758145 PREDICTED: similar to ADP-ribosylation factor binding
protein 2 [Homo sapiens]
Length = 134
Score = 261 bits (667), Expect = 1e-69
Identities = 130/133 (97%), Positives = 130/133 (97%)
Query: 481 VKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK 540
V SLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK
Sbjct: 2 VGKGSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK 61
Query: 541 SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE 600
SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE
Sbjct: 62 SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE 121
Query: 601 VKDFPDLAVLGAA 613
VKDFPDLAVLGAA
Sbjct: 122 VKDFPDLAVLGAA 134
>gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens]
Length = 507
Score = 102 bits (253), Expect = 1e-21
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 36/384 (9%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEM 88
L KATD S+ +DW+ C+ +N GP A L ++ + +E + ALTVLE
Sbjct: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
Query: 89 CMNHCGEKFHSEVAKFRFLNE-LIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF---PE 144
C+ +CG +FH VA F++ L+K++SPK + V+ +V+ ++ +W F P+
Sbjct: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPK---NNPPTIVQDKVLALIQAWADAFRSSPD 133
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDAD--------EEKSKLLT 196
+ Y+ LK++G+ + P +D + P + P+ S+ + D + + +
Sbjct: 134 LTGVVHIYEELKRKGV--EFPMADLDALSPIHT--PQRSVPEVDPAATMPRSQSQQRTSA 189
Query: 197 RLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPG 256
S P A ++ SE++++ S ++ VR + KV+ EML+
Sbjct: 190 GSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQ 249
Query: 257 QAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEG 316
+ D E LQ + C ++ + L S +++ E+L ND L L Y++
Sbjct: 250 EDSSDLELLQELNRTCRAMQQRIVELIS-RVSNEEVTEELLHVNDDLNNVFLRYERFERY 308
Query: 317 RVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDN----GPAQMGTVVPSLLHQD 372
R R + + ++ V ++ LIDL + P T PS L
Sbjct: 309 R---SGRSVQNASNGVLNEVTED--------NLIDLGPGSPAVVSPMVGNTAPPSSLSSQ 357
Query: 373 LAALGISDAPVTGMVSGQNCCEEK 396
LA L + V+G +S C +
Sbjct: 358 LAGLDLGTESVSGTLSSLQQCNPR 381
>gi|191252812 target of myb1-like 1 [Homo sapiens]
Length = 476
Score = 94.7 bits (234), Expect = 2e-19
Identities = 74/299 (24%), Positives = 145/299 (48%), Gaps = 34/299 (11%)
Query: 23 AASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKI-QSPQEKEALY 81
A S+ + KAT + +DW + C+ +NT +GP A L +I ++ KE
Sbjct: 12 ATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQL 71
Query: 82 ALTVLEMCMNHCGEKFHSEVAKFRFLNE-LIKVLSPKYLGSWATGKVKGRVIEILFSWTV 140
L++++MC+ +CG F S + K F+ E L+K+L+P+Y ++ R++ + +W+
Sbjct: 72 TLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYN---LPLDIQNRILNFIKTWSQ 128
Query: 141 WFPEDI---KIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTR 197
FP + ++++ Y L K+G + PPS +A+ E ++ T
Sbjct: 129 GFPGGVDVSEVKEVYLDLVKKG------------VQFPPS--------EAEAETARQETA 168
Query: 198 LLKSNHPEDLQAANRLIKNLVKEEQEKS---EKVSKRVSAVEEVRSHVKVLQEMLSMYRR 254
+ SN P + A L + + + E++ K S ++ V+ +V+V+ +L M
Sbjct: 169 QISSNPPTSVPTAPALSSVIAPKNSTVTLVPEQIGKLHSELDMVKMNVRVMSAIL-MENT 227
Query: 255 PG-QAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQ 312
PG + D E LQ +Y+ +++ + L +++D E++Q N+ L +L Y++
Sbjct: 228 PGSENHEDIELLQKLYKTGREMQERIMDLLV-VVENEDVTVELIQVNEDLNNAILGYER 285
>gi|209180457 target of myb1 isoform 2 [Homo sapiens]
Length = 493
Score = 82.4 bits (202), Expect = 1e-15
Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 17/292 (5%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEM 88
+ KATD S+ +DW+ C+ +N GP A + +I + E + ALTVLE
Sbjct: 17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLET 76
Query: 89 CMNHCGEKFHSEVAKFRFLNE-LIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF---PE 144
C+ +CG +FH VA F+ L++ + PK + V +V+ ++ SW F P+
Sbjct: 77 CVKNCGHRFHVLVASQDFVESVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPD 133
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHP 204
+ Y+ L+++G+ + P +D + P + P+ ++F+++ + + S
Sbjct: 134 LTGVVTIYEDLRRKGL--EFPMTDLDMLSPIHT--PQRTVFNSETQSGQDSVGTDSSQQE 189
Query: 205 EDLQAANRL----IKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPP 260
+ Q A L I + E++ K S +E V +V+V+ EML+ P
Sbjct: 190 DSGQHAAPLPAPPILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPA 249
Query: 261 DQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQ 312
D E LQ + C ++ + L ++ E+L ND L L +++
Sbjct: 250 DLELLQELNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNVFLRHER 300
>gi|4885637 target of myb1 isoform 1 [Homo sapiens]
Length = 492
Score = 82.4 bits (202), Expect = 1e-15
Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 17/292 (5%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEM 88
+ KATD S+ +DW+ C+ +N GP A + +I + E + ALTVLE
Sbjct: 17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLET 76
Query: 89 CMNHCGEKFHSEVAKFRFLNE-LIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF---PE 144
C+ +CG +FH VA F+ L++ + PK + V +V+ ++ SW F P+
Sbjct: 77 CVKNCGHRFHVLVASQDFVESVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPD 133
Query: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHP 204
+ Y+ L+++G+ + P +D + P + P+ ++F+++ + + S
Sbjct: 134 LTGVVTIYEDLRRKGL--EFPMTDLDMLSPIHT--PQRTVFNSETQSGQDSVGTDSSQQE 189
Query: 205 EDLQAANRL----IKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPP 260
+ Q A L I + E++ K S +E V +V+V+ EML+ P
Sbjct: 190 DSGQHAAPLPAPPILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPA 249
Query: 261 DQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQ 312
D E LQ + C ++ + L ++ E+L ND L L +++
Sbjct: 250 DLELLQELNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNVFLRHER 300
>gi|71773010 adaptor-related protein complex 1, gamma 1 subunit
isoform a [Homo sapiens]
Length = 825
Score = 79.0 bits (193), Expect = 1e-14
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 38/207 (18%)
Query: 399 PSSSTLPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAG 458
PSS+ GG + + D NL +A PAP + +SQ PP
Sbjct: 652 PSSA---GGELLDLLGDINLTGAPAAAPAPASVPQISQ-------PPF------------ 689
Query: 459 PLAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLL 518
L SSQ PL + + +P + Y +NG +I F ++ +P V V+
Sbjct: 690 -LLDGLSSQ---------PLFNDIAAGIPSITAYSKNGLKIEFTFERSNT--NPSVTVIT 737
Query: 519 LTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKE 578
+ ++ + D +FQ AVPK+ +++L SSS +PAF+ I+Q++ + NP K+
Sbjct: 738 IQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNT----GTITQVIKVLNPQKQ 793
Query: 579 PIRLRYKLTFNQGGQPFSEVGEVKDFP 605
+R+R KLT+N G ++ EV +FP
Sbjct: 794 QLRMRIKLTYNHKGSAMQDLAEVNNFP 820
>gi|71772942 adaptor-related protein complex 1, gamma 1 subunit
isoform b [Homo sapiens]
Length = 822
Score = 79.0 bits (193), Expect = 1e-14
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 38/207 (18%)
Query: 399 PSSSTLPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAG 458
PSS+ GG + + D NL +A PAP + +SQ PP
Sbjct: 649 PSSA---GGELLDLLGDINLTGAPAAAPAPASVPQISQ-------PPF------------ 686
Query: 459 PLAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLL 518
L SSQ PL + + +P + Y +NG +I F ++ +P V V+
Sbjct: 687 -LLDGLSSQ---------PLFNDIAAGIPSITAYSKNGLKIEFTFERSNT--NPSVTVIT 734
Query: 519 LTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKE 578
+ ++ + D +FQ AVPK+ +++L SSS +PAF+ I+Q++ + NP K+
Sbjct: 735 IQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNT----GTITQVIKVLNPQKQ 790
Query: 579 PIRLRYKLTFNQGGQPFSEVGEVKDFP 605
+R+R KLT+N G ++ EV +FP
Sbjct: 791 QLRMRIKLTYNHKGSAMQDLAEVNNFP 817
>gi|48527954 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 3 [Homo sapiens]
Length = 89
Score = 72.4 bits (176), Expect = 1e-12
Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 25 SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT 84
+LE +N+AT+P E DW++I FCEQ+N D GP A LLAHKIQSPQE EA+ ALT
Sbjct: 9 TLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALT 68
Query: 85 V 85
V
Sbjct: 69 V 69
>gi|4503843 adaptor-related protein complex 1, gamma 2 subunit [Homo
sapiens]
Length = 785
Score = 68.9 bits (167), Expect = 1e-11
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 460 LAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLL 519
L PSP L + P P+ +P L V++R G ++ L F + P +P + ++ +
Sbjct: 643 LDPSPGGALVHLLDL--PCVPPPPAPIPDLKVFEREGVQLNLSFIRP--PENPALLLITI 698
Query: 520 TMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEP 579
T + + V + Q AVPKS++++LQ S + +PA L I+Q+ + NP+K P
Sbjct: 699 TATNFSEGDVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLP----ITQLFRILNPNKAP 754
Query: 580 IRLRYKLTFNQGGQPFSEVGEVKDFP 605
+RL+ +LT++ Q E+ EV + P
Sbjct: 755 LRLKLRLTYDHFHQSVQEIFEVNNLP 780
>gi|209180448 target of myb1 isoform 3 [Homo sapiens]
Length = 460
Score = 66.2 bits (160), Expect = 8e-11
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 17/272 (6%)
Query: 50 CEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEMCMNHCGEKFHSEVAKFRFLN 108
C+ +N GP A + +I + E + ALTVLE C+ +CG +FH VA F+
Sbjct: 4 CDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVE 63
Query: 109 E-LIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF---PEDIKIRDAYQMLKKQGIIKQD 164
L++ + PK + V +V+ ++ SW F P+ + Y+ L+++G+ +
Sbjct: 64 SVLVRTILPK---NNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVTIYEDLRRKGL--EF 118
Query: 165 PKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDLQAANRL----IKNLVKE 220
P +D + P + P+ ++F+++ + + S + Q A L I +
Sbjct: 119 PMTDLDMLSPIHT--PQRTVFNSETQSGQDSVGTDSSQQEDSGQHAAPLPAPPILSGDTP 176
Query: 221 EQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLF 280
E++ K S +E V +V+V+ EML+ P D E LQ + C ++ +
Sbjct: 177 IAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVL 236
Query: 281 RLASDTTDDDDALAEILQANDLLTQGVLLYKQ 312
L ++ E+L ND L L +++
Sbjct: 237 ELIPQIA-NEQLTEELLIVNDNLNNVFLRHER 267
>gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens]
Length = 525
Score = 65.1 bits (157), Expect = 2e-10
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 30/226 (13%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMC 89
+ KAT+ + +DWS I + C++V + PNG + ++ AL ALT+L C
Sbjct: 13 VEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGAC 72
Query: 90 MNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIK-- 147
+ +CG+ FH EV F E+ V+ K A KV ++ ++ W+ F +D +
Sbjct: 73 VANCGKIFHLEVCSRDFATEVRAVIKNK-----AHPKVCEKLKSLMVEWSEEFQKDPQFS 127
Query: 148 -IRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPED 206
I + +K++GI PP S+ +K T K+ ED
Sbjct: 128 LISATIKSMKEEGI-----------TFPPAGSQTVSA-------AAKNGTSSNKNKEDED 169
Query: 207 LQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMY 252
+ A L +L +++Q+ +E +K + E++ + KV +++ ++Y
Sbjct: 170 IAKAIEL--SLQEQKQQHTE--TKSLYPSSEIQLNNKVARKVRALY 211
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 63.5 bits (153), Expect = 5e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 23 AASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYA 82
+ + E L+KAT + E DW +I C+ + +A + K+ ALYA
Sbjct: 5 SGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYA 64
Query: 83 LTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF 142
L V+E + +CG+ H EVA + + EL +L + V+ +++ ++ +W F
Sbjct: 65 LEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQ-----VEVNVRNKILYLIQAWAHAF 119
Query: 143 PEDIK---IRDAYQMLKKQG 159
+ K ++D YQ++K +G
Sbjct: 120 RNEPKYKVVQDTYQIMKVEG 139
>gi|209180450 target of myb1 isoform 4 [Homo sapiens]
Length = 447
Score = 60.5 bits (145), Expect = 5e-09
Identities = 66/285 (23%), Positives = 109/285 (38%), Gaps = 48/285 (16%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEM 88
+ KATD S+ +DW+ C+ +N GP A + +I + E + ALTVLE
Sbjct: 17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLET 76
Query: 89 CMNHCGEKFHSEVAKFRFLNE-LIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIK 147
C+ +CG +FH VA F+ L++ + PK +I+ +F+ +D
Sbjct: 77 CVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQTVFNSETQSGQDSV 136
Query: 148 IRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDL 207
D+ Q ++ + LP IL +P I E+ KL + L
Sbjct: 137 GTDSSQ---QEDSGQHAAPLPAPPILSGDTP-----IAPTPEQIGKLRSEL--------- 179
Query: 208 QAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQEALQV 267
E V +V+V+ EML+ P D E LQ
Sbjct: 180 ----------------------------EMVSGNVRVMSEMLTELVPTQAEPADLELLQE 211
Query: 268 VYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQ 312
+ C ++ + L ++ E+L ND L L +++
Sbjct: 212 LNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNVFLRHER 255
>gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens]
Length = 540
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMC 89
+ KAT + +DW I + C++V GP + ++ A+ ALT+L C
Sbjct: 13 VEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGAC 72
Query: 90 MNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIK-- 147
+++CG+ FH EV F +E+ VL+ + KV ++ ++ WT F D +
Sbjct: 73 VSNCGKIFHLEVCSRDFASEVSNVLNKGH------PKVCEKLKALMVEWTDEFKNDPQLS 126
Query: 148 -IRDAYQMLKKQGI 160
I + LK+QG+
Sbjct: 127 LISAMIKNLKEQGV 140
>gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens]
Length = 457
Score = 50.1 bits (118), Expect = 6e-06
Identities = 80/379 (21%), Positives = 141/379 (37%), Gaps = 76/379 (20%)
Query: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMC 89
L KATD S+ +DW+ C+ +N GP K+A+ AL +
Sbjct: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGP----------------KDAIRAL---KKR 57
Query: 90 MNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIKIR 149
+N G + + EV L +WA P+ +
Sbjct: 58 LN--GNRNYREVMLA--------------LTAWADAFRSS-------------PDLTGVV 88
Query: 150 DAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDAD--------EEKSKLLTRLLKS 201
Y+ LK++G+ + P +D + P +P + S+ + D + + + S
Sbjct: 89 HIYEELKRKGV--EFPMADLDALSPIHTP--QRSVPEVDPAATMPRSQSQQRTSAGSYSS 144
Query: 202 NHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPD 261
P A ++ SE++++ S ++ VR + KV+ EML+ + D
Sbjct: 145 PPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSD 204
Query: 262 QEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFG 321
E LQ + C ++ + L S +++ E+L ND L L Y++ R
Sbjct: 205 LELLQELNRTCRAMQQRIVELIS-RVSNEEVTEELLHVNDDLNNVFLRYERFERYR---S 260
Query: 322 NRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDN----GPAQMGTVVPSLLHQDLAALG 377
R + + ++ V ++ LIDL + P T PS L LA L
Sbjct: 261 GRSVQNASNGVLNEVTED--------NLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAGLD 312
Query: 378 ISDAPVTGMVSGQNCCEEK 396
+ V+G +S C +
Sbjct: 313 LGTESVSGTLSSLQQCNPR 331
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 44.3 bits (103), Expect = 3e-04
Identities = 93/396 (23%), Positives = 144/396 (36%), Gaps = 84/396 (21%)
Query: 185 FDADEEK-SKLLTRLLKSN--HPEDLQAANRLIKNLVKEEQEKSEKV--------SKRVS 233
FD ++E ++ +++S H D++ + I++ V Q + E++ + V
Sbjct: 500 FDLEKETPDEVAQEMIESGFFHESDVKIVAKSIRDRVALIQWRRERIWPALQPKEQQDVG 559
Query: 234 AVEEVRSHVKVLQEMLSMYRRPGQ-APPDQEALQVVYERCEKLRPT-LFRLASDTTDDDD 291
+ ++ R LQ ++ + + GQ PP+ E + PT LASD+T D
Sbjct: 560 SPDKARGPPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLPTSATSLASDSTFDSG 619
Query: 292 ALAEILQANDLLTQGVLLYKQVMEGRVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLID 351
+ + + Q V+L SL D S PA C+ + P
Sbjct: 620 QGSTVYSDSQSSQQSVML----------------GSLADAAPS-----PAQCVCSPP--- 655
Query: 352 LEVDNGPAQMGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQN 411
V GP +L Q L +LG P ++ LP G V
Sbjct: 656 --VSEGP---------VLPQSLPSLGAYQQPT----------------AAPGLPVGSVPA 688
Query: 412 PSADRNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPL 471
P+ +L PA + S P PG + PG P P +Q TPL
Sbjct: 689 PACPPSLQQHFP-DPAMSFAPVLPPPSTPMPTGPGQPAPPGQQ-------PPPLAQPTPL 740
Query: 472 AQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWD 531
QV P V +PP + L SQ GAP Q+ L M QP+
Sbjct: 741 PQVLAPQPVVPLQPVPPHLP------PYLAPASQVGAP----AQLKPLQMPQAPLQPLAQ 790
Query: 532 IMFQVAVPKSMRVKLQP-ASSSKLPAFSPLMPPAVI 566
+ Q+ P + + P A LP P +P A +
Sbjct: 791 VPPQMP-PIPVVPPITPLAGIDGLPPALPDLPTATV 825
Score = 31.2 bits (69), Expect = 2.9
Identities = 39/165 (23%), Positives = 59/165 (35%), Gaps = 12/165 (7%)
Query: 419 LDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPL 478
L + P P P + +P P +SP +A L P + PLA +
Sbjct: 820 LPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGA---PLAMPCRTI 876
Query: 479 ESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMST--APQPVWDIMFQV 536
P+++P L V + +H + PG P M T P P +
Sbjct: 877 VPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMR 936
Query: 537 AVPKSMRVKLQPASSSKLPAFSPLMP--PAVISQMLLLDNPHKEP 579
A P + QP LP P++P P + Q +L P + P
Sbjct: 937 ATPPQPALPPQPT----LPP-QPVLPPQPTLPPQPVLPPQPTRPP 976
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 37.0 bits (84), Expect = 0.053
Identities = 44/140 (31%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 382 PVTGMVSGQNCCEEKRNPSSSTLPG---GGVQNP--SADRNLLDLLSAQPAPCPLNYVSQ 436
P TG G NP++S +PG GG + P S +R L P+ Y SQ
Sbjct: 537 PTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTL------SPSS---GYSSQ 587
Query: 437 KSVPKEVPPGTKSSPGWSWEAGPLAPS-PSSQNTPLAQVFVPLESVKPSSLPPLIVYDRN 495
P P G P +A P P +S +P A V L S+ SS P DR+
Sbjct: 588 SGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDP-APSDRS 646
Query: 496 GFRILLHFSQTGA-PGHPEV 514
G +IL P HP+V
Sbjct: 647 GPQILTPLGDRFVIPPHPKV 666
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 35.8 bits (81), Expect = 0.12
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 416 RNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVF 475
+ + DLLS Q A VSQ S P +S+ G + P P P + PL
Sbjct: 630 QTITDLLSEQKAS-----VSQTSPQSASSPRMESTAGITTTTSPRTPPPLTVQDPLCPAV 684
Query: 476 VPLESVKPSSL 486
PLE + P S+
Sbjct: 685 CPLEELSPDSI 695
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 35.8 bits (81), Expect = 0.12
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 416 RNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVF 475
+ + DLLS Q A VSQ S P +S+ G + P P P + PL
Sbjct: 630 QTITDLLSEQKAS-----VSQTSPQSASSPRMESTAGITTTTSPRTPPPLTVQDPLCPAV 684
Query: 476 VPLESVKPSSL 486
PLE + P S+
Sbjct: 685 CPLEELSPDSI 695
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 35.8 bits (81), Expect = 0.12
Identities = 55/229 (24%), Positives = 74/229 (32%), Gaps = 27/229 (11%)
Query: 346 TCPLIDLEVDNGPAQMGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLP 405
T PL+ A + L A I+ A T S + R +SS P
Sbjct: 313 TTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSP--ADSPRPQASSYSP 370
Query: 406 GGGVQNPSADRNLLDLLSAQPAPCPLNYVS---QKSVPKEVPPGTKS-SPGWSWEAGPLA 461
+ A A PAP P + + SV + VP T S SPG ++ P
Sbjct: 371 AVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPYT 430
Query: 462 PSPSSQNTPL---AQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLL 518
PSP+ TP A P+ + PS P + + +G P P
Sbjct: 431 PSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGGPAEP------ 484
Query: 519 LTMMSTAPQPVW---DIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPA 564
A +P W D Q P + S LP P PA
Sbjct: 485 ------ASRPPWVTDDSFSQKFAPGKSTTSI---SKQTLPRGGPAYTPA 524
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 35.4 bits (80), Expect = 0.16
Identities = 66/270 (24%), Positives = 97/270 (35%), Gaps = 26/270 (9%)
Query: 326 SSLGDIPVSRVFQNPAGCMKTCPL-IDLEVD-NGPAQMGTVVPSLLHQDLAALGISDAPV 383
SS I V PA T P+ L V +GPA + +V P L AA G
Sbjct: 1436 SSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAP 1495
Query: 384 TGMVSGQNCCE----EKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSV 439
+G + + SSS PG + ++ L S C V ++
Sbjct: 1496 SGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASAL 1555
Query: 440 PKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPLESV-KPSSLPPL----IVYDR 494
P +P + P + + + TPLA + P ++ PS PPL ++
Sbjct: 1556 ASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPS 1615
Query: 495 NGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKL-------- 546
G +L SQT P ++ S +P P V P S + L
Sbjct: 1616 PGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPA---PTPVLAPSSTQTMLPAPVPSPL 1672
Query: 547 -QPASSSKL---PAFSPLMPPAVISQMLLL 572
PAS+ L PA +P + + SQ L L
Sbjct: 1673 PSPASTQTLALAPALAPTLGGSSPSQTLSL 1702
Score = 30.4 bits (67), Expect = 5.0
Identities = 49/199 (24%), Positives = 69/199 (34%), Gaps = 28/199 (14%)
Query: 399 PSSSTLP---GGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSW 455
P+SS +P + +P + + L S+ P P + S P +P S+P
Sbjct: 1410 PASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPI---SAPLTVS 1466
Query: 456 EAGP-LAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEV 514
+GP L S + P+ S+ PS P G S + PGHP
Sbjct: 1467 ASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHP-- 1524
Query: 515 QVLLLTMMSTAP---QPVWDIMFQVAVPKSMRVK---------------LQPASSSKLPA 556
+LL S P V V VP S L PASS+
Sbjct: 1525 -LLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQAL 1583
Query: 557 FSPLMPPAVISQMLLLDNP 575
+PL P A +L +P
Sbjct: 1584 ATPLAPMAAPQTAILAPSP 1602
>gi|226442791 runt-related transcription factor 2 isoform b [Homo
sapiens]
Length = 499
Score = 35.0 bits (79), Expect = 0.20
Identities = 60/240 (25%), Positives = 81/240 (33%), Gaps = 59/240 (24%)
Query: 271 RCEKLRPTLFRLASDTTDDDDALAEILQAND------LLTQGVLLYKQVME-------GR 317
RC K P F++ + D + ++ ND L ++ QV GR
Sbjct: 131 RCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGR 190
Query: 318 VTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ-------MGTVVPSLLH 370
G T ++ VF NP I + VD GP + + PSL
Sbjct: 191 SGRGKSFTLTI------TVFTNPPQVATYHRAIKVTVD-GPREPRRHRQKLDDSKPSLFS 243
Query: 371 QDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCP 430
L+ LG R P S G QNP N AP P
Sbjct: 244 DRLSDLG-------------------RIPHPSMRVGVPPQNPRPSLN--------SAPSP 276
Query: 431 LNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNT-PLAQVFVPLESVKPSSLPPL 489
N Q + P +SSP WS++ PS SQ T P PL S + + LP +
Sbjct: 277 FNPQGQSQITD--PRQAQSSPPWSYDQS--YPSYLSQMTSPSIHSTTPLSSTRGTGLPAI 332
>gi|226442783 runt-related transcription factor 2 isoform a [Homo
sapiens]
Length = 521
Score = 35.0 bits (79), Expect = 0.20
Identities = 60/240 (25%), Positives = 81/240 (33%), Gaps = 59/240 (24%)
Query: 271 RCEKLRPTLFRLASDTTDDDDALAEILQAND------LLTQGVLLYKQVME-------GR 317
RC K P F++ + D + ++ ND L ++ QV GR
Sbjct: 131 RCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGR 190
Query: 318 VTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ-------MGTVVPSLLH 370
G T ++ VF NP I + VD GP + + PSL
Sbjct: 191 SGRGKSFTLTI------TVFTNPPQVATYHRAIKVTVD-GPREPRRHRQKLDDSKPSLFS 243
Query: 371 QDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCP 430
L+ LG R P S G QNP N AP P
Sbjct: 244 DRLSDLG-------------------RIPHPSMRVGVPPQNPRPSLN--------SAPSP 276
Query: 431 LNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNT-PLAQVFVPLESVKPSSLPPL 489
N Q + P +SSP WS++ PS SQ T P PL S + + LP +
Sbjct: 277 FNPQGQSQITD--PRQAQSSPPWSYDQS--YPSYLSQMTSPSIHSTTPLSSTRGTGLPAI 332
>gi|66934969 runt-related transcription factor 2 isoform c [Homo
sapiens]
Length = 507
Score = 35.0 bits (79), Expect = 0.20
Identities = 60/240 (25%), Positives = 81/240 (33%), Gaps = 59/240 (24%)
Query: 271 RCEKLRPTLFRLASDTTDDDDALAEILQAND------LLTQGVLLYKQVME-------GR 317
RC K P F++ + D + ++ ND L ++ QV GR
Sbjct: 117 RCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGR 176
Query: 318 VTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ-------MGTVVPSLLH 370
G T ++ VF NP I + VD GP + + PSL
Sbjct: 177 SGRGKSFTLTI------TVFTNPPQVATYHRAIKVTVD-GPREPRRHRQKLDDSKPSLFS 229
Query: 371 QDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCP 430
L+ LG R P S G QNP N AP P
Sbjct: 230 DRLSDLG-------------------RIPHPSMRVGVPPQNPRPSLN--------SAPSP 262
Query: 431 LNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNT-PLAQVFVPLESVKPSSLPPL 489
N Q + P +SSP WS++ PS SQ T P PL S + + LP +
Sbjct: 263 FNPQGQSQITD--PRQAQSSPPWSYDQS--YPSYLSQMTSPSIHSTTPLSSTRGTGLPAI 318
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.7 bits (78), Expect = 0.26
Identities = 49/235 (20%), Positives = 83/235 (35%), Gaps = 20/235 (8%)
Query: 339 NPAGCMKTCPLIDLEVDNGPA----QMGTVVPS---LLHQDLAALGISDAPVTGMVSGQN 391
+P G + +I L PA + G PS L + + + AP T G
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGP 1456
Query: 392 CC-EEKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSS 450
K +P+ + + P A + + S + AP + ++P +P K
Sbjct: 1457 ATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEV 1516
Query: 451 PGWSWEAGPLAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGAPG 510
P +PSS+ P+A L P++L P + P
Sbjct: 1517 PA----------TPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPT 1566
Query: 511 HPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAV 565
E + +++P V ++ A P + + PA +S P +P PPAV
Sbjct: 1567 PKEAPATPSSKEASSPPAVTPSTYKGA-PSPKELLIPPAVTSPSPKEAP-TPPAV 1619
Score = 31.6 bits (70), Expect = 2.2
Identities = 56/215 (26%), Positives = 76/215 (35%), Gaps = 42/215 (19%)
Query: 358 PAQMGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRN 417
PA+ G P+ L + L A P+ + + +K + +S + +PSA
Sbjct: 1673 PAKKG---PTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPI----CPDPSAKNG 1725
Query: 418 LLDLLSAQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVP 477
LS AP PL V + S SP GPLAP S +TPL
Sbjct: 1726 SKGPLSTV-APAPLLPVQKDSSKTAKGKDASHSP-----KGPLAPPESKASTPLTAAAFE 1779
Query: 478 LESVKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDI-MFQV 536
KP S S + AP P + AP PV + Q
Sbjct: 1780 KVLPKPESA-----------------SVSAAPSPP-------VSLPLAPSPVPTLPPKQQ 1815
Query: 537 AVPKSMRVKLQPASSSKLPA----FSPLMPPAVIS 567
+P S + L+ S PA PL+PP IS
Sbjct: 1816 FLPSSPGLVLESPSKPLAPADEDELLPLIPPEPIS 1850
Score = 30.0 bits (66), Expect = 6.5
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 327 SLGD-IPVSRV---FQNPAGCMKTCPLIDLEVDNGPAQMGTVVPS-LLHQDLAALGISDA 381
SLG+ +P+ + +P G + +I + GP G ++ S L+ +AA + A
Sbjct: 594 SLGEPLPIGKPASSMTSPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESA 653
Query: 382 PVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLDLLSAQPAPCPLNYVSQKSVPK 441
G+ + +T G +A L +S P P+ + ++P
Sbjct: 654 DPAGV-------------APTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPL 700
Query: 442 EVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPLE---SVKPSSLPP 488
VP +++ P +APSP + PLA + + E SV SLPP
Sbjct: 701 -VPTASENCP--------VAPSPQNTCAPLATLVLAPEIPKSVPSPSLPP 741
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,118,800
Number of Sequences: 37866
Number of extensions: 1429464
Number of successful extensions: 7218
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 7020
Number of HSP's gapped (non-prelim): 334
length of query: 613
length of database: 18,247,518
effective HSP length: 108
effective length of query: 505
effective length of database: 14,157,990
effective search space: 7149784950
effective search space used: 7149784950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.