Guide to the Human Genome
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Name: TOM1L2 Sequence: fasta or formatted (457aa) NCBI GI: 75677327
Description:

target of myb1-like 2 isoform 1

Referenced in:

Lysosomes and Related Organelles

Other entries for this name:
alt prot [507aa] target of myb1-like 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         37           2
 C cysteine            0.9          4           1
 D aspartate           6.3         29           2
 E glutamate           9.4         43           2
 F phenylalanine       2.4         11           1
 G glycine             5.9         27           2
 H histidine           0.7          3           1
 I isoleucine          2.8         13           2
 K lysine              3.1         14           2
 L leucine             9.8         45           2
 M methionine          3.1         14           1
 N asparagine          4.8         22           2
 P proline             7.7         35           3
 Q glutamine           4.6         21           2
 R arginine            6.3         29           1
 S serine              9.8         45           2
 T threonine           5.3         24           1
 V valine              6.8         31           2
 W tryptophan          0.7          3           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   target of myb1-like 2 isoform 1 
TOM1L2                0.973   target of myb1-like 2 isoform 3 
TOM1                  0.530   target of myb1 isoform 1 
TOM1                  0.523   target of myb1 isoform 2 
TOM1                  0.456   target of myb1 isoform 3 
TOM1                  0.455   target of myb1 isoform 4 
TOM1L1                0.185   target of myb1-like 1 
GGA3                  0.060   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.048   ADP-ribosylation factor binding protein 3 isoform lo...
GGA1                  0.033   golgi associated, gamma adaptin ear containing, ARF b...
STAM                  0.033   signal transducing adaptor molecule 1 
GGA2                  0.032   ADP-ribosylation factor binding protein 2 
STAM2                 0.029   signal transducing adaptor molecule 2 
HGS                   0.017   hepatocyte growth factor-regulated tyrosine kinase su...
FAM71E2               0.014   hypothetical protein LOC284418 
SIN3A                 0.014   transcriptional co-repressor Sin3A 
SIN3A                 0.014   transcriptional co-repressor Sin3A 
SIN3A                 0.014   transcriptional co-repressor Sin3A 
GGA1                  0.014   golgi associated, gamma adaptin ear containing, ARF ...
COL18A1               0.013   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.013   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
MAPK7                 0.013   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.013   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.013   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.013   mitogen-activated protein kinase 7 isoform 2 
CEP63                 0.013   centrosomal protein 63 isoform d 
CEP63                 0.013   centrosomal protein 63 isoform c 
BCL9L                 0.013   B-cell CLL/lymphoma 9-like 
ZSCAN18               0.011   zinc finger and SCAN domain containing 18 isoform 3...
ZSCAN18               0.011   zinc finger and SCAN domain containing 18 isoform 3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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