Guide to the Human Genome
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Name: CCKBR Sequence: fasta or formatted (447aa) NCBI GI: 28875799
Description:

cholecystokinin B receptor

Referenced in:

Stomach, Small Intestine, and Colon
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         39           2
 C cysteine            3.4         15           2
 D aspartate           2.2         10           1
 E glutamate           2.5         11           1
 F phenylalanine       3.1         14           2
 G glycine             7.8         35           2
 H histidine           1.3          6           1
 I isoleucine          4.0         18           2
 K lysine              1.1          5           2
 L leucine            14.5         65           6
 M methionine          2.2         10           1
 N asparagine          2.2         10           1
 P proline             7.8         35           2
 Q glutamine           2.7         12           1
 R arginine            8.9         40           2
 S serine              8.7         39           3
 T threonine           5.1         23           2
 V valine              9.4         42           2
 W tryptophan          1.3          6           1
 Y tyrosine            2.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cholecystokinin B receptor 
CCKAR                 0.414   cholecystokinin A receptor 
HCRTR2                0.150   orexin receptor 2 
HCRTR1                0.137   orexin receptor 1 
NPY5R                 0.112   neuropeptide Y receptor Y5 
KISS1R                0.112   G protein-coupled receptor 54 
TRHR                  0.112   thyrotropin-releasing hormone receptor 
SSTR4                 0.110   somatostatin receptor 4 
ADRA2C                0.109   alpha-2C-adrenergic receptor 
ADRB3                 0.107   adrenergic, beta-3-, receptor 
AVPR1B                0.106   arginine vasopressin receptor 1B 
NPFFR1                0.104   neuropeptide FF receptor 1 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.102   neuropeptide FF receptor 2 isoform 3 
ADRA1D                0.101   alpha-1D-adrenergic receptor 
HTR2A                 0.097   5-hydroxytryptamine (serotonin) receptor 2A 
NMUR1                 0.097   neuromedin U receptor 1 
NPY2R                 0.096   neuropeptide Y receptor Y2 
NPY1R                 0.096   neuropeptide Y receptor Y1 
ADRA2A                0.096   alpha-2A-adrenergic receptor 
QRFPR                 0.094   G protein-coupled receptor 103 
GALR3                 0.093   galanin receptor 3 
PRLHR                 0.090   G protein-coupled receptor 10 
TACR3                 0.089   tachykinin receptor 3 
GALR2                 0.086   galanin receptor 2 
HTR1A                 0.086   5-hydroxytryptamine (serotonin) receptor 1A 
OPRD1                 0.086   opioid receptor, delta 1 
HTR2B                 0.084   5-hydroxytryptamine (serotonin) receptor 2B 
TACR2                 0.083   tachykinin receptor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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