Guide to the Human Genome
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Name: AP2S1 Sequence: fasta or formatted (104aa) NCBI GI: 11038643
Description:

adaptor-related protein complex 2, sigma 1 subunit isoform AP17delta

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [142aa] adaptor-related protein complex 2, sigma 1 subunit isoform AP17
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8          5           1
 C cysteine            1.0          1           1
 D aspartate           5.8          6           3
 E glutamate           9.6         10           2
 F phenylalanine       6.7          7           1
 G glycine             1.9          2           1
 H histidine           2.9          3           1
 I isoleucine          4.8          5           1
 K lysine              7.7          8           1
 L leucine            11.5         12           2
 M methionine          3.8          4           1
 N asparagine          4.8          5           1
 P proline             0.0          0           0
 Q glutamine           5.8          6           1
 R arginine            4.8          5           1
 S serine              1.9          2           1
 T threonine           5.8          6           1
 V valine             11.5         12           2
 W tryptophan          1.0          1           1
 Y tyrosine            3.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 2, sigma 1 subunit i... 
AP2S1                 0.897   adaptor-related protein complex 2, sigma 1 subunit i...
AP1S1                 0.315   adaptor-related protein complex 1, sigma 1 subunit [H...
AP1S2                 0.299   adaptor-related protein complex 1 sigma 2 subunit [H...
AP1S3                 0.299   adaptor-related protein complex 1, sigma 3 subunit [...
AP4S1                 0.250   adaptor-related protein complex 4, sigma 1 subunit ...
AP3S1                 0.228   adaptor-related protein complex 3, sigma 1 subunit [H...
AP3S2                 0.196   adaptor-related protein complex 3, sigma 2 subunit [H...
AP4S1                 0.092   adaptor-related protein complex 4, sigma 1 subunit i...
AP1M2                 0.038   adaptor-related protein complex 1, mu 2 subunit [Homo...
AP1M1                 0.027   adaptor-related protein complex 1, mu 1 subunit iso...
AP1M1                 0.027   adaptor-related protein complex 1, mu 1 subunit isof...
CDK5                  0.022   cyclin-dependent kinase 5 
PRPF8                 0.016   U5 snRNP-specific protein 
AP2M1                 0.016   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.016   adaptor-related protein complex 2, mu 1 subunit isof...
ANKAR                 0.016   ankyrin and armadillo repeat containing 
DAPK3                 0.011   death-associated protein kinase 3 
NLRP12                0.011   NLR family, pyrin domain containing 12 isoform 2 [Ho...
LTV1                  0.005   LTV1 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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