Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BTNL3 Sequence: fasta or formatted (466aa) NCBI GI: 37574624
Description:

butyrophilin-like 3

Referenced in:

Butyrophilin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         26           2
 C cysteine            2.1         10           1
 D aspartate           4.7         22           2
 E glutamate           6.2         29           2
 F phenylalanine       5.4         25           2
 G glycine             8.4         39           2
 H histidine           2.8         13           1
 I isoleucine          5.2         24           2
 K lysine              4.3         20           1
 L leucine             9.4         44           2
 M methionine          1.3          6           1
 N asparagine          2.6         12           2
 P proline             4.9         23           2
 Q glutamine           4.9         23           1
 R arginine            4.7         22           2
 S serine              7.9         37           2
 T threonine           4.9         23           2
 V valine              8.6         40           2
 W tryptophan          2.6         12           1
 Y tyrosine            3.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin-like 3 
BTNL8                 0.707   butyrophilin-like 8 isoform 2 precursor 
BTNL8                 0.523   butyrophilin-like 8 isoform 5 
BTNL8                 0.522   butyrophilin-like 8 isoform 3 precursor 
BTNL8                 0.427   butyrophilin-like 8 isoform 6 
BTNL8                 0.342   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.342   butyrophilin-like 8 isoform 1 precursor 
BTNL9                 0.316   butyrophilin-like 9 
BTN1A1                0.281   butyrophilin, subfamily 1, member A1 
BTN2A1                0.279   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A2                0.279   butyrophilin, subfamily 2, member A2 isoform a 
BTN3A3                0.275   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A1                0.271   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN3A3                0.265   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.202   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN2A2                0.174   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN3A2                0.159   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN3A1                0.157   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.157   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN2A1                0.157   butyrophilin, subfamily 2, member A1 isoform 2 precu...
TRIM27                0.130   ret finger protein 
BTNL2                 0.129   butyrophilin-like 2 
ERMAP                 0.129   erythroblast membrane-associated protein precursor [...
ERMAP                 0.129   erythroblast membrane-associated protein precursor [...
MEFV                  0.124   Mediterranean fever protein 
TRIM21                0.116   tripartite motif protein 21 
TRIM39                0.112   tripartite motif-containing 39 isoform 2 
TRIM39                0.112   tripartite motif-containing 39 isoform 1 
TRIM38                0.109   tripartite motif-containing 38 
TRIM58                0.109   tripartite motif-containing 58 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press