Guide to the Human Genome
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Name: BTNL8 Sequence: fasta or formatted (375aa) NCBI GI: 229577043
Description:

butyrophilin-like 8 isoform 5

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [347aa] butyrophilin-like 8 isoform 1 precursor
alt prot [384aa] butyrophilin-like 8 isoform 3 precursor
alt prot [340aa] butyrophilin-like 8 isoform 4 precursor
alt prot [316aa] butyrophilin-like 8 isoform 6
alt prot [500aa] butyrophilin-like 8 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         16           1
 C cysteine            2.4          9           2
 D aspartate           4.8         18           2
 E glutamate           6.4         24           1
 F phenylalanine       5.3         20           2
 G glycine             6.4         24           2
 H histidine           3.5         13           1
 I isoleucine          5.3         20           1
 K lysine              5.1         19           1
 L leucine             7.7         29           2
 M methionine          1.1          4           1
 N asparagine          2.7         10           1
 P proline             5.6         21           2
 Q glutamine           4.5         17           1
 R arginine            6.9         26           2
 S serine              8.8         33           3
 T threonine           6.7         25           2
 V valine              6.9         26           2
 W tryptophan          2.9         11           1
 Y tyrosine            2.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin-like 8 isoform 5 
BTNL8                 0.979   butyrophilin-like 8 isoform 2 precursor 
BTNL8                 0.974   butyrophilin-like 8 isoform 3 precursor 
BTNL8                 0.834   butyrophilin-like 8 isoform 6 
BTNL3                 0.645   butyrophilin-like 3 
BTNL8                 0.328   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.328   butyrophilin-like 8 isoform 1 precursor 
BTNL9                 0.251   butyrophilin-like 9 
BTN1A1                0.209   butyrophilin, subfamily 1, member A1 
BTN3A3                0.197   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.197   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.188   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN2A2                0.182   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN2A2                0.182   butyrophilin, subfamily 2, member A2 isoform a 
BTN2A1                0.180   butyrophilin, subfamily 2, member A1 isoform 1 precur...
ERMAP                 0.159   erythroblast membrane-associated protein precursor [...
ERMAP                 0.159   erythroblast membrane-associated protein precursor [...
TRIM27                0.147   ret finger protein 
TRIM39                0.145   tripartite motif-containing 39 isoform 2 
TRIM39                0.145   tripartite motif-containing 39 isoform 1 
TRIM58                0.143   tripartite motif-containing 58 
BTN3A1                0.141   butyrophilin, subfamily 3, member A1 isoform c [Hom...
TRIM21                0.141   tripartite motif protein 21 
MEFV                  0.133   Mediterranean fever protein 
TRIM68                0.132   ring finger protein 137 
TRIM60                0.121   ring finger protein 129 
TRIM11                0.120   tripartite motif-containing 11 
TRIML1                0.118   tripartite motif family-like 1 
TRIM75                0.114   tripartite motif-containing 75 
TRIM38                0.105   tripartite motif-containing 38 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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