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Search of human proteins with 93588498
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93588498 angiotensin II receptor-associated protein isoform
c [Homo sapiens]
(111 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93588498 angiotensin II receptor-associated protein isoform c... 249 3e-67
gi|93588503 angiotensin II receptor-associated protein isoform d... 232 4e-62
gi|93588611 angiotensin II receptor-associated protein isoform e... 213 3e-56
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 36 0.006
gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens] 36 0.008
gi|19718780 semaphorin 6B precursor [Homo sapiens] 34 0.022
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 32 0.11
gi|239756647 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|239755238 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|239751127 PREDICTED: hypothetical protein XP_002347720 [Homo ... 31 0.19
gi|239749762 PREDICTED: hypothetical protein XP_002347151 [Homo ... 31 0.19
gi|239745618 PREDICTED: hypothetical protein XP_002344144 [Homo ... 31 0.19
gi|239744021 PREDICTED: hypothetical protein XP_002343019 [Homo ... 31 0.19
gi|31542667 transmembrane protein 40 [Homo sapiens] 30 0.42
gi|117553619 solute carrier family 39, member 7 [Homo sapiens] 30 0.54
gi|117553608 solute carrier family 39, member 7 [Homo sapiens] 30 0.54
gi|21359890 solute carrier family 30 (zinc transporter), member ... 30 0.54
gi|156104872 Ets2 repressor factor [Homo sapiens] 30 0.54
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens] 29 0.71
gi|239755585 PREDICTED: hypothetical protein [Homo sapiens] 29 0.92
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 29 0.92
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 29 0.92
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 29 0.92
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 28 1.2
gi|116642895 hypothetical protein LOC390637 [Homo sapiens] 28 1.2
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 28 1.2
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 28 1.6
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|149408126 nemo like kinase [Homo sapiens] 28 2.1
>gi|93588498 angiotensin II receptor-associated protein isoform c
[Homo sapiens]
Length = 111
Score = 249 bits (636), Expect = 3e-67
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 1 MELPAVNLKGLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAH 60
MELPAVNLKGLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAH
Sbjct: 1 MELPAVNLKGLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAH 60
Query: 61 QHLLPAGQPHGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP 111
QHLLPAGQPHGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP
Sbjct: 61 QHLLPAGQPHGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP 111
>gi|93588503 angiotensin II receptor-associated protein isoform d
[Homo sapiens]
Length = 155
Score = 232 bits (592), Expect = 4e-62
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 10 GLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQP 69
GLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQP
Sbjct: 54 GLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQP 113
Query: 70 HGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP 111
HGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP
Sbjct: 114 HGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP 155
>gi|93588611 angiotensin II receptor-associated protein isoform e
[Homo sapiens]
Length = 147
Score = 213 bits (541), Expect = 3e-56
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 10 GLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQP 69
GLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQP
Sbjct: 54 GLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQP 113
Query: 70 HGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARG 103
HGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARG
Sbjct: 114 HGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARG 147
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 23/83 (27%)
Query: 21 GQLHHPGLGRVGCGSAGLHRRHKHVSGWLAG--------------------HHLPGHRAH 60
G H G G G G+ G HR H+ G + G H +PGHR H
Sbjct: 812 GHRPHEGPGG-GMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGH 870
Query: 61 QHLLPAGQPH-GH-GPLWRGHGH 81
H P H GH GP G GH
Sbjct: 871 DHRGPPPHEHRGHDGPGHGGGGH 893
>gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]
Length = 525
Score = 35.8 bits (81), Expect = 0.008
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 15/43 (34%)
Query: 39 HRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHGH 81
HR+H H GHH GH H H PHGH P HGH
Sbjct: 377 HRQHPH------GHHPHGHHPHGH-----HPHGHHP----HGH 404
Score = 35.4 bits (80), Expect = 0.010
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 10/43 (23%)
Query: 39 HRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHGH 81
H +H H GHH H H+H PHGH P HGH
Sbjct: 357 HEQHPH------GHHPHAHHPHEHDTHRQHPHGHHP----HGH 389
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 11/49 (22%)
Query: 39 HRRHKHVSGWLAGHHLPGHRAHQHLLP-----AGQPHGHGPLWRGHGHP 82
H H H GHH GH H H PH G GHG P
Sbjct: 392 HGHHPH------GHHPHGHHPHCHDFQDYGPCDPPPHNQGHCCHGHGPP 434
>gi|19718780 semaphorin 6B precursor [Homo sapiens]
Length = 888
Score = 34.3 bits (77), Expect = 0.022
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 61 QHLLPAGQPHGH--GPLWRGHGHPQLAAQA--ALLLL---RLPHVPGARGFP 105
Q LP PH H GP HGHP L A A +LLLL R P P A G P
Sbjct: 717 QKRLPTPHPHPHALGPRAWDHGHPLLPASASSSLLLLAPARAPEQPPAPGEP 768
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Query: 24 HH--PGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQ----PHGHGPLW- 76
HH P G G H ++ H+ HH H QH+ A Q PHG P +
Sbjct: 1011 HHLGPPEGLPQAAMHGHHTQYCHMQNPPPYHHHHHHHPPQHIQHAHQYHHGPHGGHPAYG 1070
Query: 77 -RGHGHPQL 84
HGHP L
Sbjct: 1071 AHAHGHPPL 1079
>gi|239756647 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 16 RLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHG 73
RL LGQ H PGL G+A + + + AG H+ GH A ++P Q G G
Sbjct: 124 RLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGA--AVVPHEQSRGMG 179
>gi|239755238 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 31.2 bits (69), Expect = 0.19
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
Query: 12 HCILRLLCLGQLHHPGLGRV-------GCGSAGLHRRHKHVSGWLAGH---HLPGHRAHQ 61
H ILR LCLG + + R C AG SGWL LPG
Sbjct: 34 HLILRWLCLGLVSRDRVFRPPLLLCAGACAFAGRPLIDVKASGWLRRSPVGALPGAGFGA 93
Query: 62 HLLPAGQPHGHGPLWRG 78
H PHG PL+ G
Sbjct: 94 HATGQRGPHGATPLFSG 110
>gi|239751127 PREDICTED: hypothetical protein XP_002347720 [Homo
sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 16 RLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHG 73
RL LGQ H PGL G+A + + + AG H+ GH A ++P Q G G
Sbjct: 124 RLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGA--AVVPHEQSRGMG 179
>gi|239749762 PREDICTED: hypothetical protein XP_002347151 [Homo
sapiens]
Length = 142
Score = 31.2 bits (69), Expect = 0.19
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
Query: 12 HCILRLLCLGQLHHPGLGRV-------GCGSAGLHRRHKHVSGWLAGH---HLPGHRAHQ 61
H ILR LCLG + + R C AG SGWL LPG
Sbjct: 34 HLILRWLCLGLVSRDRVFRPPLLLCAGACAFAGRPLIDVKASGWLRRSPVGALPGAGFGA 93
Query: 62 HLLPAGQPHGHGPLWRG 78
H PHG PL+ G
Sbjct: 94 HATGQRGPHGATPLFSG 110
>gi|239745618 PREDICTED: hypothetical protein XP_002344144 [Homo
sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 16 RLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHG 73
RL LGQ H PGL G+A + + + AG H+ GH A ++P Q G G
Sbjct: 124 RLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGA--AVVPHEQSRGMG 179
>gi|239744021 PREDICTED: hypothetical protein XP_002343019 [Homo
sapiens]
Length = 142
Score = 31.2 bits (69), Expect = 0.19
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
Query: 12 HCILRLLCLGQLHHPGLGRV-------GCGSAGLHRRHKHVSGWLAGH---HLPGHRAHQ 61
H ILR LCLG + + R C AG SGWL LPG
Sbjct: 34 HLILRWLCLGLVSRDRVFRPPLLLCAGACAFAGRPLIDVKASGWLRRSPVGALPGAGFGA 93
Query: 62 HLLPAGQPHGHGPLWRG 78
H PHG PL+ G
Sbjct: 94 HATGQRGPHGATPLFSG 110
>gi|31542667 transmembrane protein 40 [Homo sapiens]
Length = 233
Score = 30.0 bits (66), Expect = 0.42
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 60 HQHLLPAGQPHGHGPLWRGHGHPQL 84
H+ L AG PHG+G GHG P +
Sbjct: 85 HRRSLGAGYPHGNGSPGPGHGEPDV 109
>gi|117553619 solute carrier family 39, member 7 [Homo sapiens]
Length = 469
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 18 LCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGH-----HLPGHRAHQHLLPAGQPHGH 72
+ +G L LG + G G H + GH H H H H G H H
Sbjct: 11 VAVGLLTWATLGLLVAGLGGHDDLHDDLQEDFHGHSHRHSHEDFHHGHSHA--HGHGHTH 68
Query: 73 GPLWRGHGH 81
+W GH H
Sbjct: 69 ESIWHGHTH 77
>gi|117553608 solute carrier family 39, member 7 [Homo sapiens]
Length = 469
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 18 LCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGH-----HLPGHRAHQHLLPAGQPHGH 72
+ +G L LG + G G H + GH H H H H G H H
Sbjct: 11 VAVGLLTWATLGLLVAGLGGHDDLHDDLQEDFHGHSHRHSHEDFHHGHSHA--HGHGHTH 68
Query: 73 GPLWRGHGH 81
+W GH H
Sbjct: 69 ESIWHGHTH 77
>gi|21359890 solute carrier family 30 (zinc transporter), member 4
[Homo sapiens]
Length = 429
Score = 29.6 bits (65), Expect = 0.54
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 56 GHR-AHQHLLPAGQPHGHGPLWRGHGHPQLAAQAALL 91
GHR +H H LP+ P R HG LA +AA +
Sbjct: 240 GHRHSHSHSLPSNSPTRGSGCERNHGQDSLAVRAAFV 276
>gi|156104872 Ets2 repressor factor [Homo sapiens]
Length = 548
Score = 29.6 bits (65), Expect = 0.54
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 68 QPHGHGPLWRGHGHPQLAAQAALLLLRLPHVPGA-RGFPWVFSGP 111
+P G P R G P L A L RLPH PG R +P GP
Sbjct: 198 EPLGEDPRARPPGPPDLGAFRGPPLARLPHDPGVFRVYPRPRGGP 242
>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
Length = 1088
Score = 29.3 bits (64), Expect = 0.71
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 32 GCGSAGLHRRHKH------VSGWLAGHHLPGHRAHQ---HLLPAGQPHGHG----PLWRG 78
G G G +H+H S AG H P AH HLL G+P G+G P ++
Sbjct: 218 GVGPHGPGHQHQHPPKGYGASVEAAGAHFPLQGAHYGRPHLLVPGEPLGYGVQRSPSFQS 277
Query: 79 HGHPQLAAQAALLLLRLPHVPGA 101
P+ A+L PGA
Sbjct: 278 KTPPETGGYASLPTKGQGGPPGA 300
>gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 28.9 bits (63), Expect = 0.92
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 3 LPAVNLKGLH---CILRLLCLGQLHH-PGLGRVGCGSAGLHRRH----KHVSGWLAGHHL 54
LP ++G H C + L G+L PG+G + G H H HV G +A +
Sbjct: 74 LPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDPGAHV-GAVAAQRV 132
Query: 55 PGHRAHQHLLPAGQPHGHG 73
HR LL G+ H HG
Sbjct: 133 GQHRGQLRLLLGGREHRHG 151
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 28.9 bits (63), Expect = 0.92
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 3 LPAVNLKGLH---CILRLLCLGQLHH-PGLGRVGCGSAGLHRRH----KHVSGWLAGHHL 54
LP ++G H C + L G+L PG+G + G H H HV G +A +
Sbjct: 74 LPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDPGAHV-GAVAAQRV 132
Query: 55 PGHRAHQHLLPAGQPHGHG 73
HR LL G+ H HG
Sbjct: 133 GQHRGQLRLLLGGREHRHG 151
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 28.9 bits (63), Expect = 0.92
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 3 LPAVNLKGLH---CILRLLCLGQLHH-PGLGRVGCGSAGLHRRH----KHVSGWLAGHHL 54
LP ++G H C + L G+L PG+G + G H H HV G +A +
Sbjct: 74 LPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDPGAHV-GAVAAQRV 132
Query: 55 PGHRAHQHLLPAGQPHGHG 73
HR LL G+ H HG
Sbjct: 133 GQHRGQLRLLLGGREHRHG 151
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 28.9 bits (63), Expect = 0.92
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 7/31 (22%)
Query: 52 HHLPGHRAHQHLLPAGQPHGHGPLWRGHGHP 82
HH P H H H P QPH H H HP
Sbjct: 997 HHHPPHHHHHH-APPPQPHHH------HAHP 1020
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 29 GRVGCGS--AGLH-RRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHGH 81
G V C S A +H H H +A + GH H PH H PL + GH
Sbjct: 244 GGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHH-------PHAHHPLSQSSGH 292
>gi|116642895 hypothetical protein LOC390637 [Homo sapiens]
Length = 385
Score = 28.5 bits (62), Expect = 1.2
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 3 LPAVNLKGLHCILRLLCLGQLHHPGLGRVGCGSAG--LHRRHKHVSGWLAGHHLPGHRA- 59
LP G+ +L L HPG RVG S G H H+ G+ H LP +A
Sbjct: 182 LPGALRAGIEAVLLSL------HPGF-RVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAP 234
Query: 60 HQHLLPAGQPH 70
+ L P G H
Sbjct: 235 SEPLDPGGHLH 245
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 7/58 (12%)
Query: 23 LHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHG 80
L HPGL R H H H HH H H H HG G G G
Sbjct: 254 LVHPGLVRGDTPELAEHHHHHH-------HHAHPHPPHPHHAQGPPHHGGGGGGAGPG 304
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 65 PAGQPHG--HGPLWRGHG----HPQLAAQAALLLLRLPHVPGARGFP 105
PA P GPLW+G G P +A+ AL R P PGA P
Sbjct: 44 PARLPRNGRRGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSP 90
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 GHGPL--WRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP 111
GH PL WRG G LA + +L R+P P A G V GP
Sbjct: 730 GHRPLPGWRGQGVGPLAQPSVQVLGRVPRDP-AVGAATVAQGP 771
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 71 GHGPL--WRGHGHPQLAAQAALLLLRLPHVPGARGFPWVFSGP 111
GH PL WRG G LA + +L R+P P A G V GP
Sbjct: 730 GHRPLPGWRGQGVGPLAQPSVQVLGRVPRDP-AVGAATVAQGP 771
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/61 (31%), Positives = 22/61 (36%)
Query: 29 GRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHGHPQLAAQA 88
G +AG H H H L HL H QH L G P+ + AA A
Sbjct: 18 GGTSAAAAGHHHHHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAA 77
Query: 89 A 89
A
Sbjct: 78 A 78
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.146 0.528
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,093,347
Number of Sequences: 37866
Number of extensions: 337432
Number of successful extensions: 1094
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1005
Number of HSP's gapped (non-prelim): 118
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.