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Search of human proteins with 93204885
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93204885 chromosome 1 open reading frame 14 [Homo sapiens]
(653 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93204885 chromosome 1 open reading frame 14 [Homo sapiens] 1299 0.0
gi|190358504 SHC SH2-domain binding protein 1 [Homo sapiens] 243 3e-64
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens] 40 0.007
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens] 40 0.007
gi|22538470 eomesodermin [Homo sapiens] 35 0.22
gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo s... 35 0.28
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 35 0.28
gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo s... 35 0.28
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 35 0.28
gi|124244083 F-box protein 10 [Homo sapiens] 34 0.37
gi|190886435 RALBP1 associated Eps domain containing 1 isoform a... 33 0.83
gi|190886437 RALBP1 associated Eps domain containing 1 isoform b... 33 0.83
gi|188219563 hypothetical protein LOC126731 [Homo sapiens] 33 0.83
gi|119226220 membrane-spanning 4-domains, subfamily A, member 14... 33 0.83
gi|119226217 membrane-spanning 4-domains, subfamily A, member 14... 33 0.83
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens] 32 1.4
gi|156071476 hypothetical protein LOC401137 [Homo sapiens] 32 1.8
gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 31 3.1
gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 31 3.1
gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens] 31 3.1
gi|190014615 hypothetical protein LOC157983 [Homo sapiens] 31 3.1
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 31 4.1
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 31 4.1
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 31 4.1
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa... 31 4.1
gi|91982772 mucin 17 [Homo sapiens] 31 4.1
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 30 5.4
gi|4503061 crystallin, beta B1 [Homo sapiens] 30 5.4
gi|169183877 PREDICTED: similar to hCG1742476 [Homo sapiens] 30 5.4
gi|169179771 PREDICTED: similar to hCG1742476 [Homo sapiens] 30 5.4
>gi|93204885 chromosome 1 open reading frame 14 [Homo sapiens]
Length = 653
Score = 1299 bits (3362), Expect = 0.0
Identities = 653/653 (100%), Positives = 653/653 (100%)
Query: 1 MASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGK 60
MASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGK
Sbjct: 1 MASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGK 60
Query: 61 AGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVSRMRGMWRD 120
AGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVSRMRGMWRD
Sbjct: 61 AGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVSRMRGMWRD 120
Query: 121 EKVSLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEASIPFV 180
EKVSLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEASIPFV
Sbjct: 121 EKVSLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEASIPFV 180
Query: 181 GILVEVTCEPYQDSSSRFKVTVSVAEPFSSNIANIPRDLVDEILEELEHSVPLLEVYPVE 240
GILVEVTCEPYQDSSSRFKVTVSVAEPFSSNIANIPRDLVDEILEELEHSVPLLEVYPVE
Sbjct: 181 GILVEVTCEPYQDSSSRFKVTVSVAEPFSSNIANIPRDLVDEILEELEHSVPLLEVYPVE 240
Query: 241 GQDTDIHVIALALEVVRFFYDFLWRDWDDEESCENYTALIEERINLWCDIQDGTIPGPIA 300
GQDTDIHVIALALEVVRFFYDFLWRDWDDEESCENYTALIEERINLWCDIQDGTIPGPIA
Sbjct: 241 GQDTDIHVIALALEVVRFFYDFLWRDWDDEESCENYTALIEERINLWCDIQDGTIPGPIA 300
Query: 301 QRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVECWKKYYEIVMLCGLLKMWEDLRLRV 360
QRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVECWKKYYEIVMLCGLLKMWEDLRLRV
Sbjct: 301 QRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVECWKKYYEIVMLCGLLKMWEDLRLRV 360
Query: 361 HGPFFPRILRRRKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSG 420
HGPFFPRILRRRKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSG
Sbjct: 361 HGPFFPRILRRRKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSG 420
Query: 421 DTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLI 480
DTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLI
Sbjct: 421 DTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLI 480
Query: 481 QQGTVDGIVVVESGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSI 540
QQGTVDGIVVVESGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSI
Sbjct: 481 QQGTVDGIVVVESGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSI 540
Query: 541 AILERNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQ 600
AILERNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQ
Sbjct: 541 AILERNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQ 600
Query: 601 FFIVAEEALNKRASSGDKKDDKMLFKVMQNLNLEMNNNKIEANVKGDIRIVTS 653
FFIVAEEALNKRASSGDKKDDKMLFKVMQNLNLEMNNNKIEANVKGDIRIVTS
Sbjct: 601 FFIVAEEALNKRASSGDKKDDKMLFKVMQNLNLEMNNNKIEANVKGDIRIVTS 653
>gi|190358504 SHC SH2-domain binding protein 1 [Homo sapiens]
Length = 672
Score = 243 bits (621), Expect = 3e-64
Identities = 159/501 (31%), Positives = 246/501 (49%), Gaps = 55/501 (10%)
Query: 121 EKVSLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEASIPFV 180
E+ Y D +L DCKA + E ++L EK+ W VW TN VF V E + F
Sbjct: 80 ERFRAYQDYILADCKASEVQEFTAEFL-EKVLEPSGWRAVWHTN--VFKVLVEITDVDFA 136
Query: 181 GILVEVTCEPYQDSSSRFKVTVSVAEPF--SSNIANIPRDLVDEILEELEHSVPLLEVYP 238
+ K V +AEP+ S ++ + + E+L+ EH +PL E++
Sbjct: 137 AL----------------KAVVRLAEPYLCDSQVSTFTMECMKELLDLKEHRLPLQELWV 180
Query: 239 VEGQDTDIHVIALALEVVRFFYDFLWRDWDDEESCEN--YTALIEERINLWCDIQDGTIP 296
V ALA+E VRFFY +WR WD+EE E + +E R+ L DI + +P
Sbjct: 181 VFDDSGVFDQTALAIEHVRFFYQNIWRSWDEEEEDEYDYFVRCVEPRLRLHYDILEDRVP 240
Query: 297 GPIAQRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEA-----VECWKKYYEIVMLCGLLK 351
+ + L + + + + +S++ S +E VE K Y E+ L LK
Sbjct: 241 SGLIVDYHNLLSQCEESYRKFLNLRSSLSNCNSDSEQENISMVEGLKLYSEMEQLKQKLK 300
Query: 352 MWEDLRLRVHGPFFPRILRRRKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQ----- 406
+ E+ LR + + KG R G+ ITH+V+ M +++ L +D L Q+
Sbjct: 301 LIENPLLRYVFGYQKNSNIQAKGVRSSGQKITHVVSSTMMAGLLRSLLTDRLCQEPGEEE 360
Query: 407 -----HGDLDLALDNCYSGDTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSR 461
H D A++ C+ GDTVI+ PG Y + D I ++G G ++I+I
Sbjct: 361 REIQFHSDPLSAINACFEGDTVIVCPGHYVVHGTFSIADSIELEGYGLPDDIVIEKRGKG 420
Query: 462 DSFVVSKADNVKLMHLSLIQQGTVDGIVVVESGHMTLENCILKCEGTGVCVLTGAALTIT 521
D+FV ++K+ + +Q V+GI++V G TLENC+L+CE TGV V T A +
Sbjct: 421 DTFVDCTGADIKISGIKFVQHDAVEGILIVHRGKTTLENCVLQCETTGVTVRTSAEFLMK 480
Query: 522 DSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTSNSSKSTLGGVNMKVL-----PAPK 576
+S++ GA+GAG+E+YPGS L N IHHC G+ +K PK
Sbjct: 481 NSDLYGAKGAGIEIYPGSQCTLSDNGIHHCKE------------GILIKDFLDEHYDIPK 528
Query: 577 LKMTNNHIYSNKGYGVSILQP 597
+ M NN I++N+GYGV +++P
Sbjct: 529 ISMVNNIIHNNEGYGVVLVKP 549
>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
Length = 843
Score = 40.0 bits (92), Expect = 0.007
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 445 KGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLIQQGTVDGIVVVESGHMTLE-NCIL 503
KG G EE + S +V + + V + + I G G+ ++GH LE N I
Sbjct: 518 KGQGVIEENEVYSNTLAGVWVTTGSTPV--LRRNRIHSGKQVGVYFYDNGHGVLEDNDIY 575
Query: 504 KCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTSNSSKST 563
+GV + TG+ I ++I G Q G+ +Y + +E NEI +
Sbjct: 576 NHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIF-----------DNA 624
Query: 564 LGGVNMKVLPAPKLKMTNNHIYSNKGYGVSI 594
+ GV +K P L+ N I+ + G+ I
Sbjct: 625 MAGVWIKTDSNPTLR--RNKIHDGRDGGICI 653
Score = 31.2 bits (69), Expect = 3.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 497 TLENC-ILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHH 550
T+++C I CE G+ + A D+EI+ AG+ + I+ RN IHH
Sbjct: 315 TIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHH 369
Score = 31.2 bits (69), Expect = 3.1
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 468 KADNVKLMHLSLIQQGTVDGIVVVESGHMTLE-NCILKCEGTGVCVLTGAALTITDSEIT 526
K D+ + + I G GI + G LE N I + GV + T + + + I
Sbjct: 631 KTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPILRKNRIF 690
Query: 527 GAQGAGVELYPGSIAILERNEI 548
AG+E+ + A LE N+I
Sbjct: 691 DGFAAGIEITNHATATLEGNQI 712
>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
Length = 686
Score = 40.0 bits (92), Expect = 0.007
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 445 KGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLIQQGTVDGIVVVESGHMTLE-NCIL 503
KG G EE + S +V + + V + + I G G+ ++GH LE N I
Sbjct: 518 KGQGVIEENEVYSNTLAGVWVTTGSTPV--LRRNRIHSGKQVGVYFYDNGHGVLEDNDIY 575
Query: 504 KCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTSNSSKST 563
+GV + TG+ I ++I G Q G+ +Y + +E NEI +
Sbjct: 576 NHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIF-----------DNA 624
Query: 564 LGGVNMKVLPAPKLKMTNNHIYSNKGYGVSI 594
+ GV +K P L+ N I+ + G+ I
Sbjct: 625 MAGVWIKTDSNPTLR--RNKIHDGRDGGICI 653
Score = 31.2 bits (69), Expect = 3.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 497 TLENC-ILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHH 550
T+++C I CE G+ + A D+EI+ AG+ + I+ RN IHH
Sbjct: 315 TIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHH 369
>gi|22538470 eomesodermin [Homo sapiens]
Length = 686
Score = 35.0 bits (79), Expect = 0.22
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 23 GEKSASAVSGDTAAAT----------TLKGTAIPVRSVVASPRPVKGKAGRETARLRLQR 72
G S AVSG+ AAA+ T G A + VA P P G+ G +
Sbjct: 57 GSLSCEAVSGEPAAASAGAPAAMLSDTDAGDAFASAAAVAKPGPPDGRKGSPCGE---EE 113
Query: 73 LPAAQAEDTGEAAAAAA 89
LP+A A AAAAAA
Sbjct: 114 LPSAAAAAAAAAAAAAA 130
>gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo
sapiens]
Length = 554
Score = 34.7 bits (78), Expect = 0.28
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 3 SGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGT-AIPVRSVVASPRPVKGKA 61
+GSKAS + T S + +++ S+ +G + T P+ S ++S G +
Sbjct: 150 TGSKASASPSTSSTSSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTS 209
Query: 62 GR--ETARLRL------QRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVS 112
E A R+ Q +P A+ ++TG+ + P+ P P PL C++
Sbjct: 210 DLKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCIT 268
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 34.7 bits (78), Expect = 0.28
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 3 SGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGT-AIPVRSVVASPRPVKGKA 61
+GSKAS + T S + +++ S+ +G + T P+ S ++S G +
Sbjct: 230 TGSKASASPSTSSTSSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTS 289
Query: 62 GR--ETARLRL------QRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVS 112
E A R+ Q +P A+ ++TG+ + P+ P P PL C++
Sbjct: 290 DLKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCIT 348
>gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo
sapiens]
Length = 565
Score = 34.7 bits (78), Expect = 0.28
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 3 SGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGT-AIPVRSVVASPRPVKGKA 61
+GSKAS + T S + +++ S+ +G + T P+ S ++S G +
Sbjct: 161 TGSKASASPSTSSTSSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTS 220
Query: 62 GR--ETARLRL------QRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVS 112
E A R+ Q +P A+ ++TG+ + P+ P P PL C++
Sbjct: 221 DLKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCIT 279
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 34.7 bits (78), Expect = 0.28
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 3 SGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGT-AIPVRSVVASPRPVKGKA 61
+GSKAS + T S + +++ S+ +G + T P+ S ++S G +
Sbjct: 241 TGSKASASPSTSSTSSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTS 300
Query: 62 GR--ETARLRL------QRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVS 112
E A R+ Q +P A+ ++TG+ + P+ P P PL C++
Sbjct: 301 DLKGEPAETRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCIT 359
>gi|124244083 F-box protein 10 [Homo sapiens]
Length = 956
Score = 34.3 bits (77), Expect = 0.37
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 498 LENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTS 557
L N I +C +G+ + I + I AGV++ S ++ N+IHH LR+
Sbjct: 477 LRNDIYRCRASGIFLRLEGGGLIAGNNIYHNAEAGVDIRKKSNPLILCNQIHH--GLRS- 533
Query: 558 NSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSIL 595
+ VL K + NN I+SNK G+ IL
Sbjct: 534 ----------GIVVLGNGKGIIRNNQIFSNKEAGIYIL 561
Score = 32.0 bits (71), Expect = 1.8
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 18/109 (16%)
Query: 487 GIVVVESGHMTLE-NCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILER 545
GI ++ G+ + N I K G+ V IT++ I Q GV++ G I +L
Sbjct: 557 GIYILYHGNPVVSGNHIFKGRAAGIAVNENGKGLITENVIRENQWGGVDIRRGGIPVLRS 616
Query: 546 NEI--HHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGV 592
N I + + + + K + G N IY+NKG GV
Sbjct: 617 NLICFGYSDGVVVGDEGKGLIEG---------------NTIYANKGCGV 650
Score = 31.2 bits (69), Expect = 3.1
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 412 LALDNCYSGDTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSRDSFVVSKADN 471
LA+ + Y D +++FPG Y+ +L + I G GK E+ + + +
Sbjct: 125 LAMASLY--DRIVLFPGVYEEQGEIILKVPVEIVGQGKLGEVALLAS------IDQHCST 176
Query: 472 VKLMHLSLIQQGTVDGIVVVESGHMTLENC-----ILKCEGTGVC 511
+L +L + SGH+ +NC ++ G G C
Sbjct: 177 TRLCNLVFTPAWFSPIMYKTTSGHVQFDNCNFENGHIQVHGPGTC 221
Score = 30.0 bits (66), Expect = 7.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 492 ESGHMTLENCILKCEGTGV-------CVLTGAALTITDSEITGAQGAGVELYPGSIAILE 544
+SG C ++ G G+ + G + + +++I G +G+G++L P S +
Sbjct: 781 QSGVKVEAQCKVELRGNGIYDNRGHGIITKGDSTIVIENDIIGNRGSGLQLLPRSDTKVI 840
Query: 545 RNEIH 549
+N IH
Sbjct: 841 KNRIH 845
>gi|190886435 RALBP1 associated Eps domain containing 1 isoform a
[Homo sapiens]
Length = 795
Score = 33.1 bits (74), Expect = 0.83
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 6 KASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKAGRET 65
KAS PA S R D + E+ +A +A A KGT + P+PV+ + E
Sbjct: 659 KASDPASSLRVAKTDSKTEEKTAA----SAPANVSKGTT----PLAPPPKPVRRRLKSED 710
Query: 66 ARLRLQRLPAAQAEDTGEAAAAAAEEPLLP--VPEDEEEAQ 104
L+ + TG AA A +P +P V +D++ Q
Sbjct: 711 ---ELRPEVDEHTQKTGVLAAVLASQPSIPRSVGKDKKAIQ 748
>gi|190886437 RALBP1 associated Eps domain containing 1 isoform b
[Homo sapiens]
Length = 769
Score = 33.1 bits (74), Expect = 0.83
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 6 KASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKAGRET 65
KAS PA S R D + E+ +A +A A KGT + P+PV+ + E
Sbjct: 633 KASDPASSLRVAKTDSKTEEKTAA----SAPANVSKGTT----PLAPPPKPVRRRLKSED 684
Query: 66 ARLRLQRLPAAQAEDTGEAAAAAAEEPLLP--VPEDEEEAQ 104
L+ + TG AA A +P +P V +D++ Q
Sbjct: 685 ---ELRPEVDEHTQKTGVLAAVLASQPSIPRSVGKDKKAIQ 722
>gi|188219563 hypothetical protein LOC126731 [Homo sapiens]
Length = 270
Score = 33.1 bits (74), Expect = 0.83
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 29 AVSGDTAAATTLKGTAIPV-RSVVASPRPVKGKAGRETARLRLQRLPAAQAEDTGEAAAA 87
A S + +A++ G P R SP P A +E A R + P Q + G+A A
Sbjct: 55 AGSSEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAE 114
Query: 88 AAEE---PLLPVPEDEEEAQ 104
AE+ P LPV + E++ +
Sbjct: 115 DAEDAALPALPVKDVEDKPE 134
>gi|119226220 membrane-spanning 4-domains, subfamily A, member 14
isoform 2 [Homo sapiens]
Length = 662
Score = 33.1 bits (74), Expect = 0.83
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%)
Query: 67 RLRLQRLP-AAQAEDTG-EAAAAAAEEPLLPVPE-DEEEAQPLPPVCVSRMRGMWRDEKV 123
+L L R P +Q + G E ++ +LP P+ EEE +PLPP + E +
Sbjct: 192 KLTLSRSPLVSQPGNKGREFVPDEQKQSILPSPKFSEEEIEPLPPTLEKK-----PSENM 246
Query: 124 SLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEAS---IPFV 180
S+ D + K ED + + + KL + PS +K E+ S +P
Sbjct: 247 SIQLDSTFKQMKDEDLQSAIVQPSQMQTKLLQDQAASLQVFPSHSALKLEDISPEDLPSQ 306
Query: 181 GILVEVTCE---PYQDSSSRFK 199
+ VE E P + +SS K
Sbjct: 307 ALPVEGLSEQTMPSKSTSSHVK 328
>gi|119226217 membrane-spanning 4-domains, subfamily A, member 14
isoform 1 [Homo sapiens]
Length = 679
Score = 33.1 bits (74), Expect = 0.83
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%)
Query: 67 RLRLQRLP-AAQAEDTG-EAAAAAAEEPLLPVPE-DEEEAQPLPPVCVSRMRGMWRDEKV 123
+L L R P +Q + G E ++ +LP P+ EEE +PLPP + E +
Sbjct: 209 KLTLSRSPLVSQPGNKGREFVPDEQKQSILPSPKFSEEEIEPLPPTLEKK-----PSENM 263
Query: 124 SLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEAS---IPFV 180
S+ D + K ED + + + KL + PS +K E+ S +P
Sbjct: 264 SIQLDSTFKQMKDEDLQSAIVQPSQMQTKLLQDQAASLQVFPSHSALKLEDISPEDLPSQ 323
Query: 181 GILVEVTCE---PYQDSSSRFK 199
+ VE E P + +SS K
Sbjct: 324 ALPVEGLSEQTMPSKSTSSHVK 345
>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
Length = 585
Score = 32.3 bits (72), Expect = 1.4
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 468 KADNVKLMHLSLIQQGTVDGIVVVESGHMTLE-NCILKCEGTGVCVLTGAALTITDSEIT 526
+ ++ ++ + I G GI V E G +E N + GV V TG+ + + I
Sbjct: 493 RTNSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIH 552
Query: 527 GAQGAGVELYPGSIAILERNEIHH 550
+ GV Y +LE N+I++
Sbjct: 553 SGKQVGVYFYDNGHGVLEDNDIYN 576
Score = 31.2 bits (69), Expect = 3.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 497 TLENC-ILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHH 550
T+++C I CE G+ + A D+EI+ AG+ + I+ RN IHH
Sbjct: 315 TIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHH 369
>gi|156071476 hypothetical protein LOC401137 [Homo sapiens]
Length = 219
Score = 32.0 bits (71), Expect = 1.8
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 9 VPADSFRTISPDR----RGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKAGRE 64
+P F + P R +A ++ + AAA L TA PV + A+ PV A
Sbjct: 104 LPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPL--TATPVAAEPAAGAPV---AAEP 158
Query: 65 TARLRLQRLPAAQAEDTGEAAA-------AAAEEPLLPVPEDEEEAQPLP 107
A + PAA+A E AA AAEEP P + A P P
Sbjct: 159 AAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
>gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens]
Length = 439
Score = 31.2 bits (69), Expect = 3.1
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 2 ASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKA 61
A G+K+ P D +P+ R G T AT K + P
Sbjct: 260 AKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPA-------------- 305
Query: 62 GRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLP 95
E + + PAA A++ GE AA+ A LP
Sbjct: 306 --EASEVAGGTQPAAGAQEPGETAASEAASSSLP 337
>gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens]
Length = 454
Score = 31.2 bits (69), Expect = 3.1
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 2 ASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKA 61
A G+K+ P D +P+ R G T AT K + P
Sbjct: 275 AKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPA-------------- 320
Query: 62 GRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLP 95
E + + PAA A++ GE AA+ A LP
Sbjct: 321 --EASEVAGGTQPAAGAQEPGETAASEAASSSLP 352
>gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]
Length = 581
Score = 31.2 bits (69), Expect = 3.1
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 56 PVKGKAGRETARLRLQRLPAA------QAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPV 109
P + + GRE + L L A +A+ A AA P P P E P PPV
Sbjct: 11 PRELRRGREALLVLLALLALAGLGSVLRAQRGAGAGAAEPGPPRTPRPGRREPVMPRPPV 70
Query: 110 CVSRMRGMWRDEKVSLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFF 169
+ + ++ L +E+ ++ ++ YLS+++ L + W NP
Sbjct: 71 PANALGARGEAVRLQLQGEELRLQEESVRLHQI-NIYLSDRISLHRRLPERW--NPLCKE 127
Query: 170 VKYEEASIPFVGILVEVTCEPYQDSSSRFKVTVSVAE 206
KY+ ++P +++ E + S+ + SV E
Sbjct: 128 KKYDYDNLPRTSVIIAFYNEAW---STLLRTVYSVLE 161
>gi|190014615 hypothetical protein LOC157983 [Homo sapiens]
Length = 295
Score = 31.2 bits (69), Expect = 3.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 62 GRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQP 105
GR+ RLR R ED +A AA P P P+ E P
Sbjct: 37 GRDPRRLRTSRSTEILGEDLAGPSAGAAARPAAPPPQPREPGAP 80
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 30.8 bits (68), Expect = 4.1
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 20/114 (17%)
Query: 2 ASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVAS-----PRP 56
A G+K+ P D +P+ R G T AT K + P S S P
Sbjct: 260 AKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPTESPAGSLPSGEPSA 319
Query: 57 VKGKAG---------------RETARLRLQRLPAAQAEDTGEAAAAAAEEPLLP 95
+G E + + PAA A++ GE AA+ A LP
Sbjct: 320 AEGTFAVSWPSQTAEPGPAQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLP 373
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 30.8 bits (68), Expect = 4.1
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 20/114 (17%)
Query: 2 ASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVAS-----PRP 56
A G+K+ P D +P+ R G T AT K + P S S P
Sbjct: 291 AKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPTESPAGSLPSGEPSA 350
Query: 57 VKGKAG---------------RETARLRLQRLPAAQAEDTGEAAAAAAEEPLLP 95
+G E + + PAA A++ GE AA+ A LP
Sbjct: 351 AEGTFAVSWPSQTAEPGPAQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLP 404
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 30.8 bits (68), Expect = 4.1
Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 47/263 (17%)
Query: 372 RKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSGDTVIIFPGEYQ 431
+K E K ++ MM + + T++++ ++ + P E
Sbjct: 874 QKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISAS--------VTEPLEQV 925
Query: 432 AANLALLTDDIIIKGVGKREEIMITSEP------SRDSFVVSKADNVKLMHLSLIQQGTV 485
A ALLT++++ + V EE +EP +R VVS+A+ T
Sbjct: 926 EAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAEL------------TP 973
Query: 486 DGIVVVE-SGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILE 544
+ + E +G + E + A +TDS T + V+ G + +E
Sbjct: 974 EAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDIE 1033
Query: 545 RNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQFFIV 604
E ++ L V KV +L T G +LQP+++
Sbjct: 1034 EQE----------RRTQEVLQAVAEKVKEESQLPGT--------GGPEDVLQPVQR--AE 1073
Query: 605 AEEALNKRASSGDKKDDKMLFKV 627
AE + +SG KK+ ++ KV
Sbjct: 1074 AERPEEQAEASGLKKETDVVLKV 1096
>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
sapiens]
Length = 1684
Score = 30.8 bits (68), Expect = 4.1
Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 47/263 (17%)
Query: 372 RKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSGDTVIIFPGEYQ 431
+K E K ++ MM + + T++++ ++ + P E
Sbjct: 776 QKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISAS--------VTEPLEQV 827
Query: 432 AANLALLTDDIIIKGVGKREEIMITSEP------SRDSFVVSKADNVKLMHLSLIQQGTV 485
A ALLT++++ + V EE +EP +R VVS+A+ T
Sbjct: 828 EAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAEL------------TP 875
Query: 486 DGIVVVE-SGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILE 544
+ + E +G + E + A +TDS T + V+ G + +E
Sbjct: 876 EAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDIE 935
Query: 545 RNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQFFIV 604
E ++ L V KV +L T G +LQP+++
Sbjct: 936 EQE----------RRTQEVLQAVAEKVKEESQLPGT--------GGPEDVLQPVQR--AE 975
Query: 605 AEEALNKRASSGDKKDDKMLFKV 627
AE + +SG KK+ ++ KV
Sbjct: 976 AERPEEQAEASGLKKETDVVLKV 998
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 30.8 bits (68), Expect = 4.1
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 7 ASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKAGRETA 66
++ P DS + SA++ G + +T + P+RS+ S +P+ +
Sbjct: 2536 STTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKPLASSEASTLS 2595
Query: 67 RLRLQ-RLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVSRM 114
+ +P + +T ++ A++ +P+ E + L + VS M
Sbjct: 2596 TTPVDTSIPVTTSTET-SSSPTTAKDTSMPISTPSEVSTSLTSILVSTM 2643
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 30.4 bits (67), Expect = 5.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 52 ASPRPVKGKAGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCV 111
A+PR K + + R+ R +A AAAAA EEP P+P E PV
Sbjct: 567 ATPRGRKTANSQGRRKGRITRSMTNEAAAASAAAAAATEEPPPPLPPPPEPIS-TEPVET 625
Query: 112 SRMRGMWRDEKVSL 125
SR W +E++ +
Sbjct: 626 SR----WTEEEMEV 635
>gi|4503061 crystallin, beta B1 [Homo sapiens]
Length = 252
Score = 30.4 bits (67), Expect = 5.4
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 1 MASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGK 60
M+ +KAS A PD +G K A + TTL T +P+ S A+ P
Sbjct: 1 MSQAAKASASATVAVNPGPDTKG-KGAPPAGTSPSPGTTLAPTTVPITSAKAAELP---P 56
Query: 61 AGRETARLRLQRLPAAQAEDTGEAAAAA 88
L+ +AE +GE + A
Sbjct: 57 GNYRLVVFELENFQGRRAEFSGECSNLA 84
>gi|169183877 PREDICTED: similar to hCG1742476 [Homo sapiens]
Length = 278
Score = 30.4 bits (67), Expect = 5.4
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 10 PADSFRTISPDRRG----EKSASAVSGDTAAATTL--KGTAIPVRSVVASPRPV------ 57
P++SF P++R EK S+ +TA + +L + T+ P V P+
Sbjct: 136 PSNSFS--KPNKRKSFSKEKLVSSHREETAGSISLPNRKTSSPKEEAVNDPKEAGNRSVT 193
Query: 58 KGKAGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPP 108
K K G ++ R + + + E G +++ ++ L VP+++E A PP
Sbjct: 194 KKKTGNSPSK-RKELVSSGPEEAAGSKSSSKKKKKLHKVPQEDESANGRPP 243
>gi|169179771 PREDICTED: similar to hCG1742476 [Homo sapiens]
Length = 278
Score = 30.4 bits (67), Expect = 5.4
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 10 PADSFRTISPDRRG----EKSASAVSGDTAAATTL--KGTAIPVRSVVASPRPV------ 57
P++SF P++R EK S+ +TA + +L + T+ P V P+
Sbjct: 136 PSNSFS--KPNKRKSFSKEKLVSSHREETAGSISLPNRKTSSPKEEAVNDPKEAGNRSVT 193
Query: 58 KGKAGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPP 108
K K G ++ R + + + E G +++ ++ L VP+++E A PP
Sbjct: 194 KKKTGNSPSK-RKELVSSGPEEAAGSKSSSKKKKKLHKVPQEDESANGRPP 243
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,977,071
Number of Sequences: 37866
Number of extensions: 1078465
Number of successful extensions: 4022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3963
Number of HSP's gapped (non-prelim): 80
length of query: 653
length of database: 18,247,518
effective HSP length: 109
effective length of query: 544
effective length of database: 14,120,124
effective search space: 7681347456
effective search space used: 7681347456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.