Search of human proteins with 9256602

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
         (800 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9256602 protocadherin beta 10 precursor [Homo sapiens]            1581   0.0  
gi|14195616 protocadherin beta 9 precursor [Homo sapiens]            1422   0.0  
gi|11036656 protocadherin beta 7 precursor [Homo sapiens]            1179   0.0  
gi|9256608 protocadherin beta 14 precursor [Homo sapiens]            1173   0.0  
gi|9256614 protocadherin beta 3 precursor [Homo sapiens]             1170   0.0  
gi|9256612 protocadherin beta 2 precursor [Homo sapiens]             1169   0.0  
gi|9256610 protocadherin beta 15 precursor [Homo sapiens]            1157   0.0  
gi|11276081 protocadherin beta 8 precursor [Homo sapiens]            1145   0.0  
gi|11036654 protocadherin beta 13 precursor [Homo sapiens]           1144   0.0  
gi|9256616 protocadherin beta 4 precursor [Homo sapiens]             1137   0.0  
gi|9256604 protocadherin beta 11 precursor [Homo sapiens]            1134   0.0  
gi|14195605 protocadherin beta 16 precursor [Homo sapiens]           1129   0.0  
gi|9256606 protocadherin beta 12 precursor [Homo sapiens]            1125   0.0  
gi|7661662 protocadherin beta 5 precursor [Homo sapiens]             1124   0.0  
gi|9256618 protocadherin beta 6 precursor [Homo sapiens]             1114   0.0  
gi|14195607 protocadherin beta 1 precursor [Homo sapiens]             768   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...   645   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...   645   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...   642   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...   642   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...   640   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...   640   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...   639   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...   639   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...   639   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...   639   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...   638   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...   638   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...   638   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...   638   0.0  

>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
          Length = 800

 Score = 1581 bits (4094), Expect = 0.0
 Identities = 800/800 (100%), Positives = 800/800 (100%)

Query: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA
Sbjct: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE
Sbjct: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120

Query: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180
           LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI
Sbjct: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180

Query: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240
           NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP
Sbjct: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240

Query: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300
           QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE
Sbjct: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360
           IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360

Query: 361 PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT 420
           PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT
Sbjct: 361 PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
           GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540

Query: 541 LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 720
           LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 720

Query: 721 AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG 780
           AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG
Sbjct: 721 AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG 780

Query: 781 PGRKGEENSTFRNSFGFNIQ 800
           PGRKGEENSTFRNSFGFNIQ
Sbjct: 781 PGRKGEENSTFRNSFGFNIQ 800


>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
          Length = 797

 Score = 1422 bits (3681), Expect = 0.0
 Identities = 724/798 (90%), Positives = 748/798 (93%), Gaps = 2/798 (0%)

Query: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M  R   FPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA
Sbjct: 1   MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE
Sbjct: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120

Query: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180
           LRVRDINDH+PVF+ KE VLKISENTAEGTAFRLERAQDPD G N IQNYTIS NSFFHI
Sbjct: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180

Query: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240
            ISG DEGMIYPELVLDKALDREEQ ELSLTLTALDGGSPSRSGTST+RIVVLDVNDNAP
Sbjct: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240

Query: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300
           QFAQALYETQAPENSP+G LIVKV A D DSGVNAEVSYSFFDASE+I TTFQINPFSGE
Sbjct: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360
           IFLRELLDYELVNSYKINIQAMDGGGLSARC VL++VLD+NDNPPELI+SS SNSVAENS
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360

Query: 361 PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT 420
           P   LAVFKI DRDSGENGK +CY+Q+NLPF LKPSV+NFYIL+TEGALDRE +AEYNIT
Sbjct: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTEH+IT+ VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
           GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAF+FRVGA+DRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540

Query: 541 LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LS EALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 720
           LLVDGFSQPYLPLPEAAPAQAQ  ADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQ--ADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 718

Query: 721 AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG 780
           AASVGRCSVPEGPFPGHLVDV G  TL QSYQYEVCLTGG  T EFKFLKP+   +    
Sbjct: 719 AASVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHR 778

Query: 781 PGRKGEENSTFRNSFGFN 798
            G++ EENST  NSFGFN
Sbjct: 779 GGKEIEENSTLPNSFGFN 796


>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
          Length = 793

 Score = 1179 bits (3049), Expect = 0.0
 Identities = 600/788 (76%), Positives = 670/788 (85%), Gaps = 4/788 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
           ++RQVLFL +F G+S AG+   RY V EETE+G+F+ NLAKDLGL  GEL ARGTR+VSD
Sbjct: 10  QKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELRARGTRIVSD 69

Query: 70  DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
            N Q LLL S TG+LL NEKLDRE+LCGP+EPC+L FQ+L++ PFQI+RAEL VRDINDH
Sbjct: 70  QNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAELWVRDINDH 129

Query: 130 APVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGM 189
           APVF D+E  LKI E+T  G AF LE AQD D G N + NYTISPN++FHIN+    EG 
Sbjct: 130 APVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHINVHDSGEGN 189

Query: 190 IYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYET 249
           IYPELVL++ LDREE  E SLTLTALDGGSP RSGT+ VRI+VLDVNDNAP F ++LY+ 
Sbjct: 190 IYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAPDFVRSLYKV 249

Query: 250 QAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDY 309
           Q PENSP+G ++V V A D+D+G N E++Y+F  A+E I  TFQINP SG + L+  LDY
Sbjct: 250 QVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGSLHLKAQLDY 309

Query: 310 ELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFK 369
           E + +Y + IQA DGGGLS +C V+V+V D NDN PEL++SS ++ +AENSPET +AVF+
Sbjct: 310 EAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENSPETVVAVFR 369

Query: 370 INDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTP 429
           I DRDSG NGK VC IQ+++PF+LKPSVENFY L+TE  LDRE   EYNITITVTDLGTP
Sbjct: 370 IRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTP 429

Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
           RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPAL IGSVSATDRDSGTNAQV YS
Sbjct: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDSGTNAQVIYS 489

Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRV 549
           LLP QDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALS EALVRV
Sbjct: 490 LLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRV 549

Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
           LVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609

Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQP 669
           TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLH+LLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669

Query: 670 YLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSV 729
           YL LPEAAP QA +    LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA VGRCSV
Sbjct: 670 YLRLPEAAPDQANS----LTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAAPVGRCSV 725

Query: 730 PEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENS 789
           PEGPFP HLVD+ G  TLSQSYQYEVCLTGG GT+EFKFLKP+I ++  Q  GR+ EEN 
Sbjct: 726 PEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTGREVEENR 785

Query: 790 TFRNSFGF 797
            F+N+ GF
Sbjct: 786 PFQNNLGF 793


>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
          Length = 798

 Score = 1173 bits (3034), Expect = 0.0
 Identities = 593/800 (74%), Positives = 672/800 (84%), Gaps = 2/800 (0%)

Query: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           M +R     R+RQVL   +  G+S AG+    YSV EETE GSFV NLA+DLGL   EL+
Sbjct: 1   MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
           +R  RVVSDDNK+YL LD  TGNLL NEKLDR++LCG  EPC+L+FQ+++++P Q +R E
Sbjct: 61  SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120

Query: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180
           L V+DINDH+P F DKE ++KISE T  G  F +E AQD D G N +QNYTISPNS F+I
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180

Query: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240
            I    +  IYPELVLD+ALD E++ EL LTLTA+DGGSP +SGT+ V I VLD+NDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240

Query: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300
           +F Q+LYE Q PE+ P+G  I  + A+D+D+G   ++SY+FF ASE+IR TF+INP SGE
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360
           + LR  LD+E++ SY INIQA DGGGLS +C +LV+V+D NDNPPE+ +SS +  + EN+
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360

Query: 361 PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT 420
            ET +A+F I D+DSG+NG+M+C IQ+NLPF LKP+ +NF+ L++E ALDRE +AEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420

Query: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
           ITVTDLGTPRLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480

Query: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
           GTNAQV YSLLPPQD HLPLASLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540

Query: 541 LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
           LS EALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600

Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL 660
           WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660

Query: 661 LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 720
           LLVDGFSQPYLPLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSR
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR 718

Query: 721 AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG 780
           AASVGRCSVPEGPFPGHLVDV G  TLSQSYQYEVCLTGG GT+EFKFLKP+I + Q   
Sbjct: 719 AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHD 778

Query: 781 PGRKGEENSTFRNSFGFNIQ 800
            GR   E   FRNSFG NIQ
Sbjct: 779 TGRNMGEIENFRNSFGLNIQ 798


>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
          Length = 796

 Score = 1170 bits (3028), Expect = 0.0
 Identities = 596/791 (75%), Positives = 668/791 (84%), Gaps = 2/791 (0%)

Query: 8   FPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
           F RQRQVL LF+F G SLAGS   RYSV EE EKG  + NLAKDLGL   ELAARG +VV
Sbjct: 8   FLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELAARGAQVV 67

Query: 68  SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
           S  NKQ+  L   TG+LL NEKLDRE+LCGP EPC+L+FQIL+ +P Q    ELR+ D+N
Sbjct: 68  SKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNELRIIDVN 127

Query: 128 DHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDE 187
           DH+PVF + E  LKI E+T  GT   L  A+D D G N +QNYTI+PNS FH+      +
Sbjct: 128 DHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHVLTRSRRD 187

Query: 188 GMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
           G  YPELVLDKALDREEQ ELSLTLTALDGGSP RSGT+ + I VLD+NDNAP+FAQ LY
Sbjct: 188 GRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLY 247

Query: 248 ETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELL 307
           E    EN+P+  +IV V A D+D+G    +SY+FF ASE IR TFQ+NP +G++ L + L
Sbjct: 248 EVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGDMQLVKYL 307

Query: 308 DYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAV 367
           ++E +NSY+++I+A DGGGLS +  V+V+V+D NDNPPEL +SS ++ + ENS ET LAV
Sbjct: 308 NFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENSGETVLAV 367

Query: 368 FKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLG 427
           F ++D DSG+NG+++C I+ NLPF LKPSVENFY L++EGALDRE R+EYNITIT+TDLG
Sbjct: 368 FSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNITITITDLG 427

Query: 428 TPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
           TPRLKT++NITVLVSDVNDNAPAFTQ SYTLFVRENNSPALHIGSVSATDRDSGTNAQVT
Sbjct: 428 TPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487

Query: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALV 547
           YSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALS EALV
Sbjct: 488 YSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALV 547

Query: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
           RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607

Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFS 667
           KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667

Query: 668 QPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRC 727
           QPYLPLPEAAPAQAQ  ADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRC
Sbjct: 668 QPYLPLPEAAPAQAQ--ADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 725

Query: 728 SVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEE 787
           SVPEGPFPG +VDV G  TLSQSYQYEVCLTGG GT+EFKFLKP+I +  AQG  R  E 
Sbjct: 726 SVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEA 785

Query: 788 NSTFRNSFGFN 798
           N +FR SF F+
Sbjct: 786 NPSFRKSFEFS 796


>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
          Length = 798

 Score = 1169 bits (3025), Expect = 0.0
 Identities = 590/789 (74%), Positives = 662/789 (83%), Gaps = 2/789 (0%)

Query: 9   PRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68
           P+QRQVL  F+  G++ A      YSV EETE GSFV NL KDLGL  GELA RG RVVS
Sbjct: 11  PKQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVS 70

Query: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
              K +L  D  TG+LL NEKLDRE+LCGP EPC+L FQ+L+++P Q ++AELR+RD+ND
Sbjct: 71  KGKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVND 130

Query: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188
           H+PVF DKE +LKI E+   GT F +ERAQD D G N +QNYTISPN  FH+N+    +G
Sbjct: 131 HSPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDG 190

Query: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248
           +I P+LVL++ALDREEQ E+ LTLTALDGGSP RSGT+ VRI V+D+NDN P+FA+ LYE
Sbjct: 191 IILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYE 250

Query: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308
            Q PE+SP+G  +  V A D+D G N E+SY+F  ASE+IR TF+++  SGE+ LR+ LD
Sbjct: 251 VQIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLD 310

Query: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368
           +E + +Y +NIQA DGGGLS  C V V+V+D NDNPPEL +S+  N + EN  +T +AVF
Sbjct: 311 FESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVF 370

Query: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
            ++D DSG+NG+MVC IQ++LPF LKPSVENFY L+   ALDRE R+EYNITITVTD GT
Sbjct: 371 SVSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGT 430

Query: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 431 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 490

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
           SLLPPQDPHLPLASLVSINADNGHLFAL+SLDYEALQAFEFRVGA DRGSPALS EALVR
Sbjct: 491 SLLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVR 550

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 551 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 610

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
           ATEPGLFGVWAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATLH+LLVDGFSQ
Sbjct: 611 ATEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 670

Query: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728
           PYL LPEAAPAQAQ  ADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS
Sbjct: 671 PYLLLPEAAPAQAQ--ADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 728

Query: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788
           VPEGPFPG +VDV G  TLSQSYQYEVCLTGG GT+EFKFLKP+I +  AQG  R  E N
Sbjct: 729 VPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEAN 788

Query: 789 STFRNSFGF 797
            +FR SF F
Sbjct: 789 PSFRKSFEF 797


>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
          Length = 787

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 586/779 (75%), Positives = 658/779 (84%), Gaps = 2/779 (0%)

Query: 8   FPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
           FP QRQVL L L   V+LAG    RYSV EETE+GSFV NLA DLGL  GELA RG RVV
Sbjct: 8   FPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELAERGARVV 67

Query: 68  SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
           S+DN+Q L LD  TG L+ NEKLDREKLCGP EPC+++FQ+L+  P +++RAEL V DIN
Sbjct: 68  SEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAELLVTDIN 127

Query: 128 DHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDE 187
           DH+P F ++E  LKI E ++ GT F L++A+D D G N +QNY ISPNS FH++     +
Sbjct: 128 DHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHVSTRTRGD 187

Query: 188 GMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
           G  YPELVLD  LDREEQ EL LTLTA+DGGSP RSGT  + I+VLD NDNAP+F QALY
Sbjct: 188 GRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALY 247

Query: 248 ETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELL 307
           E Q PENSP+G L+VKV A D+D+G N E+SYS + +S+ I   F+++  SGEI L + L
Sbjct: 248 EVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKL 307

Query: 308 DYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAV 367
           D+E ++SY ++I+A DGGGLS +C V V+VLD NDN PEL +SS ++ + ENSPET +A+
Sbjct: 308 DFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENSPETEVAL 367

Query: 368 FKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLG 427
           F+I DRDSGENGKM+C IQ+++PF LKPSVENFY L+TEGALDRE RAEYNITIT+TDLG
Sbjct: 368 FRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNITITITDLG 427

Query: 428 TPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
           TPRLKTE +ITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT
Sbjct: 428 TPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487

Query: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALV 547
           YSLLPP+DPHLPL SLVSIN DNGHLFAL+SLDYEALQAFEFRVGATDRG PALS EALV
Sbjct: 488 YSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPALSSEALV 547

Query: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
           RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607

Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFS 667
           KATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL +LLVDGFS
Sbjct: 608 KATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQVLLVDGFS 667

Query: 668 QPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRC 727
           QPYLPLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SV LFVAVRLCRRSRAASVGRC
Sbjct: 668 QPYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASVGRC 725

Query: 728 SVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGE 786
           SVPEGPFPGHLVDV G  TLSQSYQYEVCLTGG  +++FKFLKP+  +I +Q   RK E
Sbjct: 726 SVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSRRKSE 784


>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
          Length = 801

 Score = 1145 bits (2963), Expect = 0.0
 Identities = 585/792 (73%), Positives = 664/792 (83%), Gaps = 3/792 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68
           RQRQVLF FL  G+SLAG+   R YSV EETE  SFV NLAKDLGL + E + RG RVVS
Sbjct: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69

Query: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
             NK +L L+  T +LL NEKLDRE LCG  EPC+L FQ+L++ PF+ ++AEL+V DIND
Sbjct: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129

Query: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188
           H+PVF DK+ ++K+SE++  GTAF L+ A+D D G N I+NY ISPNS+F +      +G
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFRVLTRKRSDG 189

Query: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248
             YPELVLD ALDREE+ EL LTLTALDGGSP RSGT+ V I V+DVNDNAP+F Q  Y 
Sbjct: 190 RKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR 249

Query: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308
            Q  E+SPI FL+VKV A DVD+GVN E+SYS F AS+ I  TF+++  +GEI L++ LD
Sbjct: 250 VQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKKQLD 309

Query: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368
           +E   SY++NI+A D GG S +C VL++V+D ND+ PE+ +S+F++ + EN+PET +A+F
Sbjct: 310 FEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369

Query: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
            ++D DSGENGK+ C IQE+LPFLLK SV NFY L+TE  LDRE RAEYN+TITVTDLGT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNVTITVTDLGT 429

Query: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           PRL T  N+TVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 430 PRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 489

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
           SLLPPQDPHLPLASLVSIN DNGHLFALRSLDYEALQAFEFRVGA+DRGSPALS EALVR
Sbjct: 490 SLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVR 549

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 550 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 609

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
           ATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLHLLLVDGFSQ
Sbjct: 610 ATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLHLLLVDGFSQ 669

Query: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728
           PYLPLPEAAPAQ Q  AD LTVYLVVALASVSSLFL SVLLFVAV LCRRSRAASVGRCS
Sbjct: 670 PYLPLPEAAPAQGQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRAASVGRCS 727

Query: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788
           VPEGPFPGHLVDVRG  +LSQ+YQYEVCL GG GT+EF+FLKPV+ +IQ    G + E+N
Sbjct: 728 VPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSFGPEMEQN 787

Query: 789 STFRNSFGFNIQ 800
           S FRN FGF++Q
Sbjct: 788 SNFRNGFGFSLQ 799


>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
          Length = 798

 Score = 1144 bits (2959), Expect = 0.0
 Identities = 584/792 (73%), Positives = 664/792 (83%), Gaps = 4/792 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGR-YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68
           RQRQVLF FL  G+SLAG+   R YSV EETE  SFV NLAKDLGL + E + RG RVVS
Sbjct: 10  RQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVS 69

Query: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
             NK +L L+  T +LL NEKLDRE LCG  EPC+L FQ+L++ PF+ ++AEL+V DIND
Sbjct: 70  RGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDIND 129

Query: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188
           H+PVF DK+ ++K+SE++  GT F L+ A+D D G N I+NY ISPNS+F +      +G
Sbjct: 130 HSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDG 189

Query: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248
             YPELVLDKALDREE+ EL LTLTALDGGSP RSGT+ V I VLDVNDNAP+F Q  Y 
Sbjct: 190 RKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR 249

Query: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308
            Q  E+SP+GFL+VKV A DVD+GVN E+SYS F ASE I  TF+INP +GEI L++ LD
Sbjct: 250 VQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLD 309

Query: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368
           +E + SY++NI+A D G  S +C VL++V+D ND+ PE+ +S+F++ + EN+PET +A+F
Sbjct: 310 FEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALF 369

Query: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
            ++D DSGENGK+ C IQE+LPFLLK S ENFY L+TE  LDRE RAEYNITITVTDLGT
Sbjct: 370 SVSDLDSGENGKISCSIQEDLPFLLK-SAENFYTLLTERPLDRESRAEYNITITVTDLGT 428

Query: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           P L T+ N+TVL++DVNDNAPAFTQTSYTLFVRENNSPALHI SVSATDRDSGTNAQVTY
Sbjct: 429 PMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTY 488

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
           SLLPPQDPHLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSPALS EALVR
Sbjct: 489 SLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSPALSSEALVR 548

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 549 VVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
           ATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFSQ
Sbjct: 609 ATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 668

Query: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728
           PYLPLPEAAP QAQ  ADLLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRC 
Sbjct: 669 PYLPLPEAAPTQAQ--ADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCL 726

Query: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788
           VPEGP PGHLVD+ G  TLSQSYQYEVCL GG GT+EFKFLKP+I +   Q PG++ + N
Sbjct: 727 VPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGN 786

Query: 789 STFRNSFGFNIQ 800
           STF N+FGFNIQ
Sbjct: 787 STFPNNFGFNIQ 798


>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
          Length = 795

 Score = 1137 bits (2941), Expect = 0.0
 Identities = 579/787 (73%), Positives = 651/787 (82%), Gaps = 2/787 (0%)

Query: 12  RQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDN 71
           RQVL   L   +S       RYSV EETE GSFV +LAKDLGL  GELA+R  RV+SDD+
Sbjct: 11  RQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDDD 70

Query: 72  KQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAP 131
           KQ L LD  TG+LL  EKLDRE+LCGP EPC+L+FQ+ ++ P Q ++ EL ++DINDH+P
Sbjct: 71  KQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHSP 130

Query: 132 VFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIY 191
           +F ++E +LKI EN+  GT F L  A+D D G NG+Q YTISPNS FHI      EG  Y
Sbjct: 131 IFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKKY 190

Query: 192 PELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQA 251
           P+LV DK LDREEQ E SLTL ALDGGSP RSGT  VRI+++D+NDNAP+F    Y  Q 
Sbjct: 191 PDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQV 250

Query: 252 PENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYEL 311
            ENSP+   IV+V A D+D+G    VSY  F AS+ I+ TF IN  +GEI L++ LD+E 
Sbjct: 251 LENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFEK 310

Query: 312 VNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFKIN 371
           + SY + I+A DGGGLS +  V++EV+D NDNPPELI+SS ++S+ EN+PET +++F+I 
Sbjct: 311 IKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRIR 370

Query: 372 DRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRL 431
           DRDSGENGKM+C I +NLPF+LKP+++NFY L+TE  LDRE  AEYNITI VTDLGTPRL
Sbjct: 371 DRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPRL 430

Query: 432 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
           KT+ NITV VSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL
Sbjct: 431 KTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490

Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLV 551
           PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGA+DRGSPALS EALVRVLV
Sbjct: 491 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLV 550

Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
           LD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 551 LDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 610

Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYL 671
           PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFSQPYL
Sbjct: 611 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 670

Query: 672 PLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 731
           PLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCSVPE
Sbjct: 671 PLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 728

Query: 732 GPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENSTF 791
           GPFPGHLVDV G  TLSQSYQYEVCLTG  GT EFKFLKP+  ++  Q  GR+ +EN  F
Sbjct: 729 GPFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVKENPKF 788

Query: 792 RNSFGFN 798
           RNS  F+
Sbjct: 789 RNSLVFS 795


>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
          Length = 797

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 585/787 (74%), Positives = 656/787 (83%), Gaps = 2/787 (0%)

Query: 12  RQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDN 71
           RQVL LF+  G+S AGS    +SV EE + GSFV NLAKDLGL   EL++RG RVVS+D 
Sbjct: 12  RQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDK 71

Query: 72  KQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAP 131
           KQ L LD +TG+LL +E LDRE+LCG  EPC+L+ Q+LM +P Q  + EL+VRDINDH+P
Sbjct: 72  KQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDINDHSP 131

Query: 132 VFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIY 191
           +F +K+ +L+I EN+  G  F LE A+D D G+N +++YTISPNS FHI +    +   Y
Sbjct: 132 IFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHIKMRVIPDNRKY 191

Query: 192 PELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQA 251
           PELVLDKALD EE  ELS  L+ALDGGSP RSGT+ VR+VV+D+NDN+P+F QA YE + 
Sbjct: 192 PELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251

Query: 252 PENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYEL 311
            ENS +G LI+ V A D+DSG N E+ Y+F  ASE+IR TF+IN  SGEI LR  LD+E 
Sbjct: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPLDFET 311

Query: 312 VNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFKIN 371
           + SY I IQA DGGGL  +  V++ V+D NDN PE+ VSS ++ + EN+PET + VF I 
Sbjct: 312 IESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENTPETVVMVFSIQ 371

Query: 372 DRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRL 431
           D DSG+NG++VC I E+LPF+LK SVEN+Y L TE  LDRE  AEYNITITVTDLG PRL
Sbjct: 372 DIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIPRL 431

Query: 432 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
           KTEHN TVLVSDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV YSLL
Sbjct: 432 KTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLL 491

Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLV 551
           PPQD HLPLASLVSIN DNGHLFALRSLDYEALQAF+FRVGATDRGSPALS EALVRVLV
Sbjct: 492 PPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPALSSEALVRVLV 551

Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
           LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611

Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYL 671
           PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL +LLVDGFSQPYL
Sbjct: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYL 671

Query: 672 PLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 731
           PLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVG CSVP+
Sbjct: 672 PLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGSCSVPK 729

Query: 732 GPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENSTF 791
           GPFPGHLVDV G  TLSQSYQYEVCLTGG  T+EFKFLKPVI +IQA+G G+  EENSTF
Sbjct: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLGKNSEENSTF 789

Query: 792 RNSFGFN 798
           RNSFGFN
Sbjct: 790 RNSFGFN 796


>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
          Length = 776

 Score = 1129 bits (2920), Expect = 0.0
 Identities = 564/764 (73%), Positives = 647/764 (84%), Gaps = 2/764 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
           RQRQVL  F+   +S AG+  G YSV EETE+GSFV NL KDLGL   E++ R  R++S 
Sbjct: 10  RQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMSTRKARIISQ 69

Query: 70  DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
            NKQ+L L + TG+LL NEKLDRE+LCGP EPC+L+FQ+LM++P +I++AELRV DINDH
Sbjct: 70  GNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAELRVIDINDH 129

Query: 130 APVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGM 189
           +P+F +KE +LKI EN+  GT F L  A D D G N +QNY ISP+S F + I    +G 
Sbjct: 130 SPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRVLIHEFRDGR 189

Query: 190 IYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYET 249
            YPELVLDK LDREE+ +L LTLTALDGGSP RSGT+ VRI V+D+NDNAP+F Q +Y+ 
Sbjct: 190 KYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKV 249

Query: 250 QAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDY 309
           Q PENSP+G L+  V A D+D G N ++SY+ F  SE+I  T ++NP +GE+ LR+ +D+
Sbjct: 250 QIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQVDF 309

Query: 310 ELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFK 369
           E+V SY++ I+A DGGGLS +C +L++V+D NDNPP++ +S+ ++ + ENSPE  +AVF 
Sbjct: 310 EMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENSPEIVVAVFS 369

Query: 370 INDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTP 429
           ++D DSG NGK +  IQE+LPFLLKPSV+NFY L+TE ALDRE RAEYNIT+TVTD+GTP
Sbjct: 370 VSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNITLTVTDMGTP 429

Query: 430 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489
           RLKTEHNITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS
Sbjct: 430 RLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 489

Query: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRV 549
           LLPPQDPHLPLASLVSINADNGHLFALRSLDYEAL+ FEFRV ATDRGSPALS EALVRV
Sbjct: 490 LLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPALSSEALVRV 549

Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
           LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609

Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQP 669
           TEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLH+LLVDGFSQP
Sbjct: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669

Query: 670 YLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSV 729
           +LPLPEAAP Q QA +  LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS+
Sbjct: 670 FLPLPEAAPGQTQANS--LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSM 727

Query: 730 PEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVI 773
           PEGPFPG LVDV G  TLSQSYQYEVCLTGG  TSEFKFLKP+I
Sbjct: 728 PEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPII 771


>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
          Length = 795

 Score = 1125 bits (2910), Expect = 0.0
 Identities = 575/786 (73%), Positives = 652/786 (82%), Gaps = 2/786 (0%)

Query: 12  RQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDN 71
           RQVL  F+  G+S AGS  G + V EE + GSFV NLAK LGL   EL++RG RVVS+DN
Sbjct: 12  RQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELSSRGARVVSNDN 71

Query: 72  KQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAP 131
           K+ L LD++TG+LL  E LDRE+LCG  EPC+LYFQ+LM +P Q  + EL+VRDINDH+P
Sbjct: 72  KECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIELQVRDINDHSP 131

Query: 132 VFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIY 191
           VF +KE +L+I EN+  G  F LE A+D D G+N +++YTI+PNS FH+ I    +   Y
Sbjct: 132 VFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHVKIRVNPDNRKY 191

Query: 192 PELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQA 251
           PELVLDKALD EE+ ELS  LTALDGGSP RSGT+ VR+VV+D+NDN+P+F QA YE + 
Sbjct: 192 PELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSPEFEQAFYEVKI 251

Query: 252 PENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYEL 311
            ENS +G L+V V A D+DSG N+E+SY+F  ASE+IR TF+IN  SG+I L   LD+E 
Sbjct: 252 LENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGDITLTAPLDFEA 311

Query: 312 VNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVFKIN 371
           + SY I IQA DGGGL  +  V ++V+D NDN PE+ VSS ++ + EN+PET + VF+I 
Sbjct: 312 IESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENTPETVVMVFRIR 371

Query: 372 DRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRL 431
           DRDSG+NGKMVC I E++PF+LK SV N+Y L TE  LDRE RAEYNITITVTDLGTPRL
Sbjct: 372 DRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNITITVTDLGTPRL 431

Query: 432 KTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 491
           KTEHNITVLVSDVNDNAPAFTQTSY LFVRENNSPALHIGS+SATDRDSGTNAQV YSLL
Sbjct: 432 KTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDSGTNAQVNYSLL 491

Query: 492 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLV 551
           P QDPHLPLASLVSINADNGHLFALRSLDYEALQ F+FRVGATD GSPALS EALVRVLV
Sbjct: 492 PSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPALSSEALVRVLV 551

Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
           LDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 552 LDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611

Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYL 671
           PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFSQPYL
Sbjct: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 671

Query: 672 PLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPE 731
           PLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA VGRCSVPE
Sbjct: 672 PLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAPVGRCSVPE 729

Query: 732 GPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENSTF 791
           GPFPGHLVDV G  TLSQSY YEVC+TGG  +++FKFLKP+I +   Q  G + EEN  F
Sbjct: 730 GPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTGSEVEENPPF 789

Query: 792 RNSFGF 797
           +N+ GF
Sbjct: 790 QNNLGF 795


>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
          Length = 795

 Score = 1124 bits (2907), Expect = 0.0
 Identities = 575/790 (72%), Positives = 650/790 (82%), Gaps = 3/790 (0%)

Query: 9   PRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVS 68
           P++RQV+FL +   +  AGS   RYS+ EETE G  V NLAKDLGL  GELA RG R+  
Sbjct: 9   PQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELATRGARMHY 68

Query: 69  DDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
             NK+ L LD  TGNLL  EKLDRE +CG  EPC+L+FQ+L+++P Q ++ +L++ DIND
Sbjct: 69  KGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTDLQLTDIND 128

Query: 129 HAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEG 188
           HAP F +KE +LKI E+T  GT F L+ AQD D G N +QNYTISPNS FH+      +G
Sbjct: 129 HAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHVATHNRGDG 188

Query: 189 MIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYE 248
             YPELVLDKALDREE+ ELSLTLTALDGG+P RSGT+T+RIVVLD NDNAP+F Q+ YE
Sbjct: 189 RKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYE 248

Query: 249 TQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLD 308
            Q PENSP+  L+V V A D+D+G    V+Y+ F   E +   F I+  + EI L+  LD
Sbjct: 249 VQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAEIRLKRALD 307

Query: 309 YELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAVF 368
           +E    Y + I A DGGGLS +C V +EV+D NDN PEL +S+ S+   EN+PET +AVF
Sbjct: 308 FEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENAPETVVAVF 367

Query: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
            ++D DSG+NG+M+C IQ +LPFLLKP+++NFY L+T+  LDRE +AEYNITITVTD+GT
Sbjct: 368 SVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNITITVTDMGT 427

Query: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY
Sbjct: 428 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 487

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
           SLLPPQ+PHL LASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALS EALVR
Sbjct: 488 SLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVR 547

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK
Sbjct: 548 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 607

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
           ATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFSQ
Sbjct: 608 ATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQ 667

Query: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCS 728
           PYLPLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGRCS
Sbjct: 668 PYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCS 725

Query: 729 VPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEEN 788
           VPEGPFPGHLVDV G  TLSQSY YEVCLTG  G  EFKFLKP+I ++  QG G +  + 
Sbjct: 726 VPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAGEEIGKT 785

Query: 789 STFRNSFGFN 798
           + FRNSFG N
Sbjct: 786 AAFRNSFGLN 795


>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
          Length = 794

 Score = 1114 bits (2882), Expect = 0.0
 Identities = 573/791 (72%), Positives = 649/791 (82%), Gaps = 7/791 (0%)

Query: 10  RQRQVLF--LFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVV 67
           ++RQV F  L + WG    GS   +YSV EETE G+FV NL KDLGL  GELA+RG RVV
Sbjct: 9   KKRQVAFFILLMLWGE--VGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVV 66

Query: 68  SDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIN 127
              N+Q+L  D  T +LL NEKLDRE+LCG  EPC+L FQ+L+++P Q ++A LRVRDIN
Sbjct: 67  FKGNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDIN 126

Query: 128 DHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDE 187
           DHAP F  +E +LKISE T  G  F L+ A D D G NG+Q YTIS N  FH+      E
Sbjct: 127 DHAPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSE 186

Query: 188 GMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
           G  +PELVLDK LDREEQ +L LTL ALDGGSP RSGTS ++I VLD+NDN P+FAQ LY
Sbjct: 187 GRKFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246

Query: 248 ETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELL 307
           E Q PEN+P+G L++ V A D+D+G   +VSY+ F   +++   F+IN  +GEI LR+ L
Sbjct: 247 EAQVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKAL 305

Query: 308 DYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPETPLAV 367
           D+E + SY ++++A DGGGLS +C ++V VLD NDN PEL +S F + + EN PE  +AV
Sbjct: 306 DFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAV 365

Query: 368 FKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLG 427
           F ++D DSG N +++C I+ NLPFLL+PSVENFY L+TEGALDRE RAEYNITITVTDLG
Sbjct: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLG 425

Query: 428 TPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVT 487
           TPRLKT+ +ITV VSDVNDN PAFTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQVT
Sbjct: 426 TPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVT 485

Query: 488 YSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALV 547
           YSLLPPQDPHLPL+SLVSINADNGHLFALRSLDYEALQ+FEFRVGATDRGSPALS EALV
Sbjct: 486 YSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALV 545

Query: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
           R+LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL
Sbjct: 546 RLLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 605

Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFS 667
           KATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+LLVDGFS
Sbjct: 606 KATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 665

Query: 668 QPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRC 727
           QPYLPLPEAAPAQAQ  AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAASVGR 
Sbjct: 666 QPYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRY 723

Query: 728 SVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEE 787
           SVPEGPFPGHLVDV G  TLSQSYQY+VCLTGG  T+EFKFLKP++ +   QG  R+ EE
Sbjct: 724 SVPEGPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEE 783

Query: 788 NSTFRNSFGFN 798
             T RNSF F+
Sbjct: 784 TPTSRNSFPFS 794


>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
          Length = 818

 Score =  768 bits (1983), Expect = 0.0
 Identities = 400/765 (52%), Positives = 537/765 (70%), Gaps = 6/765 (0%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSD 69
           + RQV  L +F  +S+  +   RYSV EE E GSFV N+AKDLGL  G+LAARG R+VS+
Sbjct: 10  QNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVSE 69

Query: 70  DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDH 129
            NK +  L   TG+L   EKLDRE LCG  +PC+L+F++++ +P Q +RAE+RV DIND+
Sbjct: 70  GNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDINDN 129

Query: 130 APVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGM 189
           APVF +KE +LKI E+T  G+ F L+ AQD D GLNG+QNYT+S N +FH++      G 
Sbjct: 130 APVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHGP 189

Query: 190 IYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYET 249
            Y ELVL+K LDREEQ E++LT+TA+DGGSP +SGT+ + +VVLDVND+ PQF++ +Y  
Sbjct: 190 KYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRA 249

Query: 250 QAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDY 309
           Q  ENSP G L+  V A D+D G N  ++YS     E I  TFQI+P +GE+ LR  LD+
Sbjct: 250 QVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLDF 309

Query: 310 ELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS-PETPLAVF 368
           E + +Y I+IQA DGGGLSA  +VLVEV+D NDNPPE++VSS S+ + E+S P+T +A+F
Sbjct: 310 EAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVALF 369

Query: 369 KINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGT 428
            I DRD    GK+ C+++E+LPF++KP+  N Y L+T+ +LDRE  + YNITI   D G 
Sbjct: 370 TIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTGP 429

Query: 429 PRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTY 488
           P L  E  I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+TY
Sbjct: 430 PSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQITY 489

Query: 489 SLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVR 548
           SLLPP++  L + + +SIN+ NG L+ALR++DYEA+Q F+F V ATD G  +LS +  VR
Sbjct: 490 SLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVR 549

Query: 549 VLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLK 608
           V+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LLK
Sbjct: 550 VVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLK 609

Query: 609 ATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQ 668
           AT+ GLF V   NGE+ T R +SERD    +L++LV+D+G+P  S T +L++LLVDGFS+
Sbjct: 610 ATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFSE 669

Query: 669 PYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR---AASVG 725
           PYL   +  P +   + +  T YLV++L  +S LFLLSV++   + + ++ +     ++ 
Sbjct: 670 PYLQFQD--PTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQ 727

Query: 726 RCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLK 770
                +  F  +LV  +G  +LS+   YE+C   G G SEF+FLK
Sbjct: 728 EHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLK 772


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  645 bits (1665), Expect = 0.0
 Identities = 360/749 (48%), Positives = 475/749 (63%), Gaps = 6/749 (0%)

Query: 32  RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLD 91
           RYSV EE EKGS V ++++DLGL   ELA RG R++     Q   L+  +G+L+T  ++D
Sbjct: 32  RYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQLFALNPRSGSLVTAGRID 91

Query: 92  REKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTA 151
           RE+LC     C L   ILM+D  +IY  E+ VRDIND+AP F++ E  +KISEN A    
Sbjct: 92  REELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYFRESELEIKISENAATEMR 151

Query: 152 FRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLT 211
           F L  A DPD G N +Q+Y +SPN+ F + +  G +G  YPELVL +ALDREE+    L 
Sbjct: 152 FPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPELVLKRALDREEKAAHHLV 211

Query: 212 LTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDS 271
           LTA DGG P R+GT+ +R++VLD NDNAP FAQ  Y    PEN  +G  ++ V A D D 
Sbjct: 212 LTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPENLALGTQLLVVNATDPDE 271

Query: 272 GVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARC 331
           GVNAEV YSF    +     F+++  SG I     LD+E    Y++ +QAMD  G SAR 
Sbjct: 272 GVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESGFYQMEVQAMDNAGYSARA 331

Query: 332 RVLVEVLDTNDNPPELIVSSFSNSVAENSPE-TPLAVFKINDRDSGENGKMVCYIQENLP 390
           +VL+ VLD NDN PE++++S ++SV ENSP  T +A+  +ND+DS ENG+++C+IQ NLP
Sbjct: 332 KVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVNDQDSEENGQVICFIQGNLP 391

Query: 391 FLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPA 450
           F L+ S  N+Y L+T+  LDRE    YNIT+T TD GTP L TE +I++ V+D NDN P 
Sbjct: 392 FKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPV 451

Query: 451 FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADN 510
           F Q SY+ ++ ENN   + + SV+A D D   NAQ+TYSL         L+S VSIN+D 
Sbjct: 452 FPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAENTIQGASLSSYVSINSDT 511

Query: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP-LQNGS 569
           G L+AL S DYE  +  + +V A D G P LS    + + VLD NDN+P +LYP L    
Sbjct: 512 GVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTDG 571

Query: 570 APCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629
           +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEVRTAR 
Sbjct: 572 STGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARA 631

Query: 630 LSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAEADLLT 689
           L +RDA K  LVV V+D+G+PP SAT TL + + D   Q    L  +  + A +E   LT
Sbjct: 632 LLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADL-GSLESPANSETSDLT 690

Query: 690 VYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVRGAETL 747
           +YLVVA+A+VS +FL  V+L +A+RL R  +SR        +   P   H V V G +  
Sbjct: 691 LYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLTGAP-ASHFVGVDGVQAF 749

Query: 748 SQSYQYEVCLTGGPGTSEFKFLKPVISDI 776
            Q+Y +EV LT     S   F +P  +D+
Sbjct: 750 LQTYSHEVSLTTDSRKSHLIFPQPNYADM 778


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  645 bits (1665), Expect = 0.0
 Identities = 360/749 (48%), Positives = 475/749 (63%), Gaps = 6/749 (0%)

Query: 32  RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLD 91
           RYSV EE EKGS V ++++DLGL   ELA RG R++     Q   L+  +G+L+T  ++D
Sbjct: 32  RYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQLFALNPRSGSLVTAGRID 91

Query: 92  REKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTA 151
           RE+LC     C L   ILM+D  +IY  E+ VRDIND+AP F++ E  +KISEN A    
Sbjct: 92  REELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYFRESELEIKISENAATEMR 151

Query: 152 FRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLT 211
           F L  A DPD G N +Q+Y +SPN+ F + +  G +G  YPELVL +ALDREE+    L 
Sbjct: 152 FPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPELVLKRALDREEKAAHHLV 211

Query: 212 LTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDS 271
           LTA DGG P R+GT+ +R++VLD NDNAP FAQ  Y    PEN  +G  ++ V A D D 
Sbjct: 212 LTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPENLALGTQLLVVNATDPDE 271

Query: 272 GVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARC 331
           GVNAEV YSF    +     F+++  SG I     LD+E    Y++ +QAMD  G SAR 
Sbjct: 272 GVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESGFYQMEVQAMDNAGYSARA 331

Query: 332 RVLVEVLDTNDNPPELIVSSFSNSVAENSPE-TPLAVFKINDRDSGENGKMVCYIQENLP 390
           +VL+ VLD NDN PE++++S ++SV ENSP  T +A+  +ND+DS ENG+++C+IQ NLP
Sbjct: 332 KVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVNDQDSEENGQVICFIQGNLP 391

Query: 391 FLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPA 450
           F L+ S  N+Y L+T+  LDRE    YNIT+T TD GTP L TE +I++ V+D NDN P 
Sbjct: 392 FKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPV 451

Query: 451 FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADN 510
           F Q SY+ ++ ENN   + + SV+A D D   NAQ+TYSL         L+S VSIN+D 
Sbjct: 452 FPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAENTIQGASLSSYVSINSDT 511

Query: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP-LQNGS 569
           G L+AL S DYE  +  + +V A D G P LS    + + VLD NDN+P +LYP L    
Sbjct: 512 GVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTDG 571

Query: 570 APCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629
           +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEVRTAR 
Sbjct: 572 STGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARA 631

Query: 630 LSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAEADLLT 689
           L +RDA K  LVV V+D+G+PP SAT TL + + D   Q    L  +  + A +E   LT
Sbjct: 632 LLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADL-GSLESPANSETSDLT 690

Query: 690 VYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVRGAETL 747
           +YLVVA+A+VS +FL  V+L +A+RL R  +SR        +   P   H V V G +  
Sbjct: 691 LYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLTGAP-ASHFVGVDGVQAF 749

Query: 748 SQSYQYEVCLTGGPGTSEFKFLKPVISDI 776
            Q+Y +EV LT     S   F +P  +D+
Sbjct: 750 LQTYSHEVSLTTDSRKSHLIFPQPNYADM 778


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  642 bits (1655), Expect = 0.0
 Identities = 353/757 (46%), Positives = 477/757 (63%), Gaps = 12/757 (1%)

Query: 26  AGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLL 85
           AG+G   YSV EET+KGSFV N+AKDLGL   ELA  G R+VS        L+  +G+L+
Sbjct: 26  AGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLI 85

Query: 86  TNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISEN 145
           T  ++DRE+LC    PC++ F IL++D  +++  E+ + DIND+ P FQ +E   K++E 
Sbjct: 86  TARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEI 145

Query: 146 TAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQ 205
           T  GT   L   QD D G+N +Q+Y +S N  F +++  G +G  +PE+VL   LDREE+
Sbjct: 146 TTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPLDREEE 205

Query: 206 GELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVW 265
               L LTA DGG P RSGT  + I V+D NDN P F QA Y    PEN P+G  ++ V 
Sbjct: 206 AVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGTQLLMVN 265

Query: 266 AEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGG 325
           A D D G N EV+YSF +    +   F+++ ++GEI  +E LD+E    Y + +QA DG 
Sbjct: 266 ATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSMEVQAQDGA 325

Query: 326 GLSARCRVLVEVLDTNDNPPELIVSSFSNSVAEN-SPETPLAVFKINDRDSGENGKMVCY 384
           GL A+ +VL++VLD NDN PE+ ++S + +V EN  P T +A+  ++D+DSG+NG   C+
Sbjct: 326 GLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCF 385

Query: 385 IQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDV 444
           I  NLPF L+  V+N+Y L+TE  LDRE+ + YNITIT  D GTP L TE +I++LV+D+
Sbjct: 386 IPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDI 445

Query: 445 NDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLV 504
           NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL+       PL++ +
Sbjct: 446 NDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAYL 505

Query: 505 SINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP 564
           SIN+D G L+ALRS DYE  +  + +V A D G P LS    + + +LD NDN+P +LYP
Sbjct: 506 SINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNAPEILYP 565

Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
            L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GE
Sbjct: 566 ALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGE 625

Query: 624 VRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQA 683
           VRTAR L +RDA K  LVV V+D+G+PP SAT TL + + D  S     L    P+    
Sbjct: 626 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLEPSAKPN 685

Query: 684 EADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHL 738
           ++D LT+YLVVA A+VS +FL  V++ +A RL R  +SR   A+  G  S+P      H 
Sbjct: 686 DSD-LTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMP----GSHF 740

Query: 739 VDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
           V V G     Q+Y +EV LT     S   F +P  +D
Sbjct: 741 VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  642 bits (1655), Expect = 0.0
 Identities = 353/757 (46%), Positives = 477/757 (63%), Gaps = 12/757 (1%)

Query: 26  AGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLL 85
           AG+G   YSV EET+KGSFV N+AKDLGL   ELA  G R+VS        L+  +G+L+
Sbjct: 26  AGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLI 85

Query: 86  TNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISEN 145
           T  ++DRE+LC    PC++ F IL++D  +++  E+ + DIND+ P FQ +E   K++E 
Sbjct: 86  TARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEI 145

Query: 146 TAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQ 205
           T  GT   L   QD D G+N +Q+Y +S N  F +++  G +G  +PE+VL   LDREE+
Sbjct: 146 TTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPLDREEE 205

Query: 206 GELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVW 265
               L LTA DGG P RSGT  + I V+D NDN P F QA Y    PEN P+G  ++ V 
Sbjct: 206 AVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGTQLLMVN 265

Query: 266 AEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGG 325
           A D D G N EV+YSF +    +   F+++ ++GEI  +E LD+E    Y + +QA DG 
Sbjct: 266 ATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSMEVQAQDGA 325

Query: 326 GLSARCRVLVEVLDTNDNPPELIVSSFSNSVAEN-SPETPLAVFKINDRDSGENGKMVCY 384
           GL A+ +VL++VLD NDN PE+ ++S + +V EN  P T +A+  ++D+DSG+NG   C+
Sbjct: 326 GLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCF 385

Query: 385 IQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDV 444
           I  NLPF L+  V+N+Y L+TE  LDRE+ + YNITIT  D GTP L TE +I++LV+D+
Sbjct: 386 IPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDI 445

Query: 445 NDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLV 504
           NDN+P F Q SY+ ++ ENN     I SV A D DS  NAQ+TYSL+       PL++ +
Sbjct: 446 NDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAYL 505

Query: 505 SINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP 564
           SIN+D G L+ALRS DYE  +  + +V A D G P LS    + + +LD NDN+P +LYP
Sbjct: 506 SINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNAPEILYP 565

Query: 565 -LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGE 623
            L    +   EL P +AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GE
Sbjct: 566 ALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGE 625

Query: 624 VRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQA 683
           VRTAR L +RDA K  LVV V+D+G+PP SAT TL + + D  S     L    P+    
Sbjct: 626 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLEPSAKPN 685

Query: 684 EADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHL 738
           ++D LT+YLVVA A+VS +FL  V++ +A RL R  +SR   A+  G  S+P      H 
Sbjct: 686 DSD-LTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMP----GSHF 740

Query: 739 VDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
           V V G     Q+Y +EV LT     S   F +P  +D
Sbjct: 741 VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  640 bits (1650), Expect = 0.0
 Identities = 365/782 (46%), Positives = 480/782 (61%), Gaps = 12/782 (1%)

Query: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           MA    C  R R VL   L   +  A +   RYSV EETEKG  V N++KDL L   ELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
            R  R+VS    Q   L+  +G L+T  ++DRE+LC     C++ F++L++D  ++Y  E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180
           + V DIND AP FQ +   +KI+E    G  + L  A DPD G+N +Q+Y +SPN  F +
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240
           N+  GD G I PELVL++ALDREE     L LTA DGG P RS T  + + VLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300
            FAQ +Y  +  EN P G  ++   A D+D G+N +V+Y F+  +E     FQ+N  +GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360
           I   + LDYE  + Y++ IQA DGGGL    +VL+ V D NDN PE+ ++S  + V E++
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 PE-TPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNI 419
           P+ T + +F  +DRDSG+NG++VC IQENL F L+ S E++Y L+T   LDRE  +EYNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
           T+T TD GTP L TE +IT+ V+D+NDN PAF+Q SY++++ ENN+    I SV A D D
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 480 SGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539
           S  N++V YSL        PL++ VSIN+D G L+AL S DYE  +  + +V A+D GSP
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 540 ALSREALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 598
            LS    +R+ VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 599 NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 658
           NAWLSY+L KA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 659 HLLLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRL--- 715
            + + D        L  +    A  EA  LT+YLVVA+A VS +FL  V+  +A+RL   
Sbjct: 661 TVAIADSIPDILADL-GSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHW 719

Query: 716 --CRRSRAASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVI 773
                 RA S G   VP      H V V G     Q+Y  E  LT     S   F +P  
Sbjct: 720 HSSHLLRATSDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNY 775

Query: 774 SD 775
           +D
Sbjct: 776 AD 777


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score =  640 bits (1650), Expect = 0.0
 Identities = 365/782 (46%), Positives = 480/782 (61%), Gaps = 12/782 (1%)

Query: 1   MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
           MA    C  R R VL   L   +  A +   RYSV EETEKG  V N++KDL L   ELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
            R  R+VS    Q   L+  +G L+T  ++DRE+LC     C++ F++L++D  ++Y  E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180
           + V DIND AP FQ +   +KI+E    G  + L  A DPD G+N +Q+Y +SPN  F +
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240
           N+  GD G I PELVL++ALDREE     L LTA DGG P RS T  + + VLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300
            FAQ +Y  +  EN P G  ++   A D+D G+N +V+Y F+  +E     FQ+N  +GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360
           I   + LDYE  + Y++ IQA DGGGL    +VL+ V D NDN PE+ ++S  + V E++
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 PE-TPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNI 419
           P+ T + +F  +DRDSG+NG++VC IQENL F L+ S E++Y L+T   LDRE  +EYNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 420 TITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 479
           T+T TD GTP L TE +IT+ V+D+NDN PAF+Q SY++++ ENN+    I SV A D D
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 480 SGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP 539
           S  N++V YSL        PL++ VSIN+D G L+AL S DYE  +  + +V A+D GSP
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 540 ALSREALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 598
            LS    +R+ VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 599 NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 658
           NAWLSY+L KA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 659 HLLLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRL--- 715
            + + D        L  +    A  EA  LT+YLVVA+A VS +FL  V+  +A+RL   
Sbjct: 661 TVAIADSIPDILADL-GSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHW 719

Query: 716 --CRRSRAASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVI 773
                 RA S G   VP      H V V G     Q+Y  E  LT     S   F +P  
Sbjct: 720 HSSHLLRATSDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNY 775

Query: 774 SD 775
           +D
Sbjct: 776 AD 777


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  639 bits (1648), Expect = 0.0
 Identities = 351/751 (46%), Positives = 475/751 (63%), Gaps = 12/751 (1%)

Query: 33  YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDR 92
           YSV+EET+KGSFV ++AKDLGL   ELA RG R++S    Q   L+  +G+L+T  ++DR
Sbjct: 33  YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 92

Query: 93  EKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAF 152
           E++C     C++ F ILM+D   +Y  ++ + DIND+ P F  +E  +KI ENTA G  F
Sbjct: 93  EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152

Query: 153 RLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLTL 212
            L  A DPD G N +Q+Y +SPN  F + +  GD+   YPELVL++ LDREE+    L L
Sbjct: 153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212

Query: 213 TALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDSG 272
           TA DGG P RS T+ +++ V+DVND+ P F+   Y+   PEN P+G  ++ V A D+D G
Sbjct: 213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272

Query: 273 VNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCR 332
           VN EV+YSF   +  +   F +N  +GEI   E LDYE    Y++ +QA DG G   + +
Sbjct: 273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332

Query: 333 VLVEVLDTNDNPPELIVSSFSNSVAENSP-ETPLAVFKINDRDSGENGKMVCYIQENLPF 391
           VL+ VLD NDN PE+ ++S S+S+ E++P  T +A+F + DRDSG+NG++ C I ENLPF
Sbjct: 333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392

Query: 392 LLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAF 451
            L+ S++N+Y L+T   LDRE  + YNIT+  TD GTP L  E +I + V+D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452

Query: 452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
             +SY++++ ENN     I  V+A D DS  NAQ+TYSL        P++S VSIN+D G
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512

Query: 512 HLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP-LQNGSA 570
            L+AL+S DYE L+  + RV A D G P LS    + + VLD NDN P +LYP L    +
Sbjct: 513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572

Query: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
              EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF V  + GEVRTAR L
Sbjct: 573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632

Query: 631 SERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAEADLLTV 690
            +RDA K  LVV V+D+G+PP SAT TL + + D   +    L    P+      D LT+
Sbjct: 633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYD-LTL 691

Query: 691 YLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVRGAE 745
           YLVVA+A+VS +FL  VL+ +A+RL R  +SR   A+  G  +VP      H V + G +
Sbjct: 692 YLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQ 747

Query: 746 TLSQSYQYEVCLTGGPGTSEFKFLKPVISDI 776
              Q+Y +EV LT     S   F +P   D+
Sbjct: 748 AFLQTYSHEVSLTADSRKSHLIFPQPNYVDM 778


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score =  639 bits (1648), Expect = 0.0
 Identities = 351/751 (46%), Positives = 475/751 (63%), Gaps = 12/751 (1%)

Query: 33  YSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDR 92
           YSV+EET+KGSFV ++AKDLGL   ELA RG R++S    Q   L+  +G+L+T  ++DR
Sbjct: 33  YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 92

Query: 93  EKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENTAEGTAF 152
           E++C     C++ F ILM+D   +Y  ++ + DIND+ P F  +E  +KI ENTA G  F
Sbjct: 93  EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152

Query: 153 RLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQGELSLTL 212
            L  A DPD G N +Q+Y +SPN  F + +  GD+   YPELVL++ LDREE+    L L
Sbjct: 153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212

Query: 213 TALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWAEDVDSG 272
           TA DGG P RS T+ +++ V+DVND+ P F+   Y+   PEN P+G  ++ V A D+D G
Sbjct: 213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272

Query: 273 VNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGLSARCR 332
           VN EV+YSF   +  +   F +N  +GEI   E LDYE    Y++ +QA DG G   + +
Sbjct: 273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332

Query: 333 VLVEVLDTNDNPPELIVSSFSNSVAENSP-ETPLAVFKINDRDSGENGKMVCYIQENLPF 391
           VL+ VLD NDN PE+ ++S S+S+ E++P  T +A+F + DRDSG+NG++ C I ENLPF
Sbjct: 333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392

Query: 392 LLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAF 451
            L+ S++N+Y L+T   LDRE  + YNIT+  TD GTP L  E +I + V+D NDN P F
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452

Query: 452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
             +SY++++ ENN     I  V+A D DS  NAQ+TYSL        P++S VSIN+D G
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512

Query: 512 HLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP-LQNGSA 570
            L+AL+S DYE L+  + RV A D G P LS    + + VLD NDN P +LYP L    +
Sbjct: 513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572

Query: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
              EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF V  + GEVRTAR L
Sbjct: 573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632

Query: 631 SERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAEADLLTV 690
            +RDA K  LVV V+D+G+PP SAT TL + + D   +    L    P+      D LT+
Sbjct: 633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYD-LTL 691

Query: 691 YLVVALASVSSLFLLSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVRGAE 745
           YLVVA+A+VS +FL  VL+ +A+RL R  +SR   A+  G  +VP      H V + G +
Sbjct: 692 YLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQ 747

Query: 746 TLSQSYQYEVCLTGGPGTSEFKFLKPVISDI 776
              Q+Y +EV LT     S   F +P   D+
Sbjct: 748 AFLQTYSHEVSLTADSRKSHLIFPQPNYVDM 778


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score =  639 bits (1647), Expect = 0.0
 Identities = 356/753 (47%), Positives = 480/753 (63%), Gaps = 6/753 (0%)

Query: 27  GSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLT 86
           GSG  RYS+ EE +KGSFV N+AKDLGL   ELA RG R+VS    Q   L+  +G+L+T
Sbjct: 27  GSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVT 86

Query: 87  NEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENT 146
             ++DRE+LC     C++ F IL+++  +IY  E+ + DIND+ P F+D+E  +K++EN 
Sbjct: 87  AGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENA 146

Query: 147 AEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQG 206
           A GT   L  A+D D G+N +++Y +S N  F +++  G +G  YPELVL++ LDRE++ 
Sbjct: 147 AAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKET 206

Query: 207 ELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWA 266
              L LTALDGG P  SGT+ +R+ VLD NDNAP F  + Y    PEN P+G  ++ + A
Sbjct: 207 VHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTA 266

Query: 267 EDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGG 326
            D D G+N +++YSF +  E I  TFQ++   GEI   + LDYE    Y + + A DGG 
Sbjct: 267 TDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA 326

Query: 327 LSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS-PETPLAVFKINDRDSGENGKMVCYI 385
           L A  +V+V V D NDN PE+I++S ++S++E+  P T +A+F ++D DSGENG++ C I
Sbjct: 327 LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386

Query: 386 QENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVN 445
             NLPF L+ SV+N+Y L+T   LDRE  ++YNIT+TV D GTP L TE +I + V+DVN
Sbjct: 387 PRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVN 446

Query: 446 DNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 505
           DN P F Q SY+  V ENN   + I SV+A D DSG NA+VTYSL        PL+S VS
Sbjct: 447 DNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVS 506

Query: 506 INADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP- 564
           IN+D G L+ALRS DYE L+  +  V A+D G+P LS    + + VLD NDN+P +LYP 
Sbjct: 507 INSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA 566

Query: 565 LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV 624
           L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEV
Sbjct: 567 LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEV 626

Query: 625 RTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAE 684
           RTAR L +RDA K  LVV V+D+G+PP SAT T+ + + D        L          +
Sbjct: 627 RTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPIDPED 686

Query: 685 ADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVR 742
            D LT+YLVVA+A+VS +FL  V++ + +RL R  +SR        +   P   H V V 
Sbjct: 687 LD-LTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVP-ASHFVGVD 744

Query: 743 GAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
           G     Q+Y +EV LT     S   F +P  +D
Sbjct: 745 GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  639 bits (1647), Expect = 0.0
 Identities = 356/753 (47%), Positives = 480/753 (63%), Gaps = 6/753 (0%)

Query: 27  GSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRVVSDDNKQYLLLDSHTGNLLT 86
           GSG  RYS+ EE +KGSFV N+AKDLGL   ELA RG R+VS    Q   L+  +G+L+T
Sbjct: 27  GSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVT 86

Query: 87  NEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDINDHAPVFQDKETVLKISENT 146
             ++DRE+LC     C++ F IL+++  +IY  E+ + DIND+ P F+D+E  +K++EN 
Sbjct: 87  AGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENA 146

Query: 147 AEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGDEGMIYPELVLDKALDREEQG 206
           A GT   L  A+D D G+N +++Y +S N  F +++  G +G  YPELVL++ LDRE++ 
Sbjct: 147 AAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKET 206

Query: 207 ELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALYETQAPENSPIGFLIVKVWA 266
              L LTALDGG P  SGT+ +R+ VLD NDNAP F  + Y    PEN P+G  ++ + A
Sbjct: 207 VHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTA 266

Query: 267 EDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGG 326
            D D G+N +++YSF +  E I  TFQ++   GEI   + LDYE    Y + + A DGG 
Sbjct: 267 TDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGA 326

Query: 327 LSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS-PETPLAVFKINDRDSGENGKMVCYI 385
           L A  +V+V V D NDN PE+I++S ++S++E+  P T +A+F ++D DSGENG++ C I
Sbjct: 327 LVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSI 386

Query: 386 QENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVN 445
             NLPF L+ SV+N+Y L+T   LDRE  ++YNIT+TV D GTP L TE +I + V+DVN
Sbjct: 387 PRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVN 446

Query: 446 DNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 505
           DN P F Q SY+  V ENN   + I SV+A D DSG NA+VTYSL        PL+S VS
Sbjct: 447 DNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVS 506

Query: 506 INADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYP- 564
           IN+D G L+ALRS DYE L+  +  V A+D G+P LS    + + VLD NDN+P +LYP 
Sbjct: 507 INSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA 566

Query: 565 LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEV 624
           L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+EPGLF V  H GEV
Sbjct: 567 LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEV 626

Query: 625 RTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAE 684
           RTAR L +RDA K  LVV V+D+G+PP SAT T+ + + D        L          +
Sbjct: 627 RTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPIDPED 686

Query: 685 ADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSRAASVGRCSVPEGPFPGHLVDVR 742
            D LT+YLVVA+A+VS +FL  V++ + +RL R  +SR        +   P   H V V 
Sbjct: 687 LD-LTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVP-ASHFVGVD 744

Query: 743 GAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
           G     Q+Y +EV LT     S   F +P  +D
Sbjct: 745 GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  638 bits (1646), Expect = 0.0
 Identities = 363/776 (46%), Positives = 478/776 (61%), Gaps = 18/776 (2%)

Query: 10  RQRQVLFLFLF---WGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRV 66
           R  QVL L L    WG + A     RYS+ EE EKGSFV N+ KDLGL   ELA  G R+
Sbjct: 10  RSEQVLLLTLLGTLWGAAAAQI---RYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRI 66

Query: 67  VSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDI 126
           VS    Q   L+   G+L+T  ++DRE+LC     C++ F IL++D   +Y  E+ + DI
Sbjct: 67  VSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDI 126

Query: 127 NDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGD 186
           ND+ P F  +E  +KI EN A  + F L    DPD G+N +Q + +S NS F +++    
Sbjct: 127 NDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEA 186

Query: 187 EGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQAL 246
            G  YPELVL+  LDRE +    L LTA+DGG P RS  + + + VLDVNDN P F Q +
Sbjct: 187 HGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPV 246

Query: 247 YETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLREL 306
           Y    PEN P+G  ++ V A D D GV+ EV+YSF   +E I   F +N  +GEI     
Sbjct: 247 YRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSAN 306

Query: 307 LDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPE-TPL 365
           LDYE  + Y++ ++A DG GL  R +VL+ +LD NDN PE++V+S S ++AE++P  T +
Sbjct: 307 LDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVI 366

Query: 366 AVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTD 425
           A+F++ DRDSG NG + C I  +LPF L+ SV N+Y L+T  ALDRE    YNIT+T TD
Sbjct: 367 ALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATD 426

Query: 426 LGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
            GTP L TE  I++ V+D NDN P F  +SY+++V ENN     I SV+A D D   NAQ
Sbjct: 427 KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQ 486

Query: 486 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREA 545
           V+YSL        PL+S VSIN+D G L+ALRS DYE L+  +  V A+D G P LS   
Sbjct: 487 VSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNV 546

Query: 546 LVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 604
            + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 547 SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY 606

Query: 605 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVD 664
           +LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL + + D
Sbjct: 607 RLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 666

Query: 665 GFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR-- 720
                   L    P+    ++D LT+YLVVA+A+VS +FL  V++ +A+RL R  +SR  
Sbjct: 667 RIPDILADLGSLEPSAKPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLL 725

Query: 721 -AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
            A+  G  S+P      H V V G     Q+Y +EV LT     S   F +P  +D
Sbjct: 726 QASGGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  638 bits (1646), Expect = 0.0
 Identities = 363/776 (46%), Positives = 478/776 (61%), Gaps = 18/776 (2%)

Query: 10  RQRQVLFLFLF---WGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELAARGTRV 66
           R  QVL L L    WG + A     RYS+ EE EKGSFV N+ KDLGL   ELA  G R+
Sbjct: 10  RSEQVLLLTLLGTLWGAAAAQI---RYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRI 66

Query: 67  VSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDI 126
           VS    Q   L+   G+L+T  ++DRE+LC     C++ F IL++D   +Y  E+ + DI
Sbjct: 67  VSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDI 126

Query: 127 NDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGGD 186
           ND+ P F  +E  +KI EN A  + F L    DPD G+N +Q + +S NS F +++    
Sbjct: 127 NDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEA 186

Query: 187 EGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQAL 246
            G  YPELVL+  LDRE +    L LTA+DGG P RS  + + + VLDVNDN P F Q +
Sbjct: 187 HGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPV 246

Query: 247 YETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLREL 306
           Y    PEN P+G  ++ V A D D GV+ EV+YSF   +E I   F +N  +GEI     
Sbjct: 247 YRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSAN 306

Query: 307 LDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPE-TPL 365
           LDYE  + Y++ ++A DG GL  R +VL+ +LD NDN PE++V+S S ++AE++P  T +
Sbjct: 307 LDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVI 366

Query: 366 AVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTD 425
           A+F++ DRDSG NG + C I  +LPF L+ SV N+Y L+T  ALDRE    YNIT+T TD
Sbjct: 367 ALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATD 426

Query: 426 LGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQ 485
            GTP L TE  I++ V+D NDN P F  +SY+++V ENN     I SV+A D D   NAQ
Sbjct: 427 KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQ 486

Query: 486 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREA 545
           V+YSL        PL+S VSIN+D G L+ALRS DYE L+  +  V A+D G P LS   
Sbjct: 487 VSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNV 546

Query: 546 LVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSY 604
            + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLSY
Sbjct: 547 SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY 606

Query: 605 QLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVD 664
           +LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL + + D
Sbjct: 607 RLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 666

Query: 665 GFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR-- 720
                   L    P+    ++D LT+YLVVA+A+VS +FL  V++ +A+RL R  +SR  
Sbjct: 667 RIPDILADLGSLEPSAKPNDSD-LTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLL 725

Query: 721 -AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
            A+  G  S+P      H V V G     Q+Y +EV LT     S   F +P  +D
Sbjct: 726 QASGGGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYAD 777


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score =  638 bits (1645), Expect = 0.0
 Identities = 356/777 (45%), Positives = 484/777 (62%), Gaps = 19/777 (2%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFG----RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTR 65
           R R +L L +F G      GF     RYSV EETEKGSFV N++KDLGL   ELA RG R
Sbjct: 10  RSRLLLLLCIFLGTL---RGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66

Query: 66  VVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRD 125
           +VS    Q   ++  +G+L+T  ++DRE+LC     C L  ++L++D  +IY  E+ + D
Sbjct: 67  IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126

Query: 126 INDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGG 185
           IND+AP FQ+ E  +K+SE+   G  F L  A+DPD G+N +Q+Y +SPN++F + + G 
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186

Query: 186 DEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQA 245
            +G   PELVL+ +LDRE++    L LTALDGG P R G   +R+VVLDVND+ P F Q+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246

Query: 246 LYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRE 305
           +Y    PEN   G  ++ V A D D G+N EV YSF +        FQ++  +GE+ +R 
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306

Query: 306 LLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPE-TP 364
            LD+E    Y++ IQ  DGGGL     +L+ V+D NDN PE+ ++S  NS+ ENSP  T 
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366

Query: 365 LAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVT 424
           +A+  + D+DSGENG++ C+I  +LPF L+ +  N+Y LIT   LDRE+   YNIT+T T
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426

Query: 425 DLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA 484
           D G+P L  E ++ + V+D NDN P F  +SY+ ++ ENN     I SV+A D DS  NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486

Query: 485 QVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSRE 544
            VTYSL       +PL+S VSIN++ G L+AL+S DYE  +  E RV A D G P LS  
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546

Query: 545 ALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS 603
             + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606

Query: 604 YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLV 663
           Y+LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL + + 
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666

Query: 664 DGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR- 720
           D   +    L  +  + A +E   L++YLVVA+A+VS +FL+ V++ +A+RL R  +SR 
Sbjct: 667 DSIPEVLADL-GSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRL 725

Query: 721 --AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
             A+  G   +P      H V V G +   Q+Y +EV L      S   F +P   D
Sbjct: 726 LQASEGGLAGMP----TSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGD 778


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score =  638 bits (1645), Expect = 0.0
 Identities = 356/777 (45%), Positives = 484/777 (62%), Gaps = 19/777 (2%)

Query: 10  RQRQVLFLFLFWGVSLAGSGFG----RYSVTEETEKGSFVVNLAKDLGLAEGELAARGTR 65
           R R +L L +F G      GF     RYSV EETEKGSFV N++KDLGL   ELA RG R
Sbjct: 10  RSRLLLLLCIFLGTL---RGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66

Query: 66  VVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRD 125
           +VS    Q   ++  +G+L+T  ++DRE+LC     C L  ++L++D  +IY  E+ + D
Sbjct: 67  IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126

Query: 126 INDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHINISGG 185
           IND+AP FQ+ E  +K+SE+   G  F L  A+DPD G+N +Q+Y +SPN++F + + G 
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186

Query: 186 DEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQA 245
            +G   PELVL+ +LDRE++    L LTALDGG P R G   +R+VVLDVND+ P F Q+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246

Query: 246 LYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGEIFLRE 305
           +Y    PEN   G  ++ V A D D G+N EV YSF +        FQ++  +GE+ +R 
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306

Query: 306 LLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENSPE-TP 364
            LD+E    Y++ IQ  DGGGL     +L+ V+D NDN PE+ ++S  NS+ ENSP  T 
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366

Query: 365 LAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVT 424
           +A+  + D+DSGENG++ C+I  +LPF L+ +  N+Y LIT   LDRE+   YNIT+T T
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426

Query: 425 DLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNA 484
           D G+P L  E ++ + V+D NDN P F  +SY+ ++ ENN     I SV+A D DS  NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486

Query: 485 QVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSRE 544
            VTYSL       +PL+S VSIN++ G L+AL+S DYE  +  E RV A D G P LS  
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546

Query: 545 ALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS 603
             + + VLD NDN+P +LYP L    +   EL PR+AEPGYLVTKVVAVD DSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606

Query: 604 YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLV 663
           Y+LLKA+EPGLF V  H GEVRTAR L +RDA K  LVV V+D+G+PP SAT TL + + 
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666

Query: 664 DGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCR--RSR- 720
           D   +    L  +  + A +E   L++YLVVA+A+VS +FL+ V++ +A+RL R  +SR 
Sbjct: 667 DSIPEVLADL-GSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRL 725

Query: 721 --AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISD 775
             A+  G   +P      H V V G +   Q+Y +EV L      S   F +P   D
Sbjct: 726 LQASEGGLAGMP----TSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGD 778


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,667,877
Number of Sequences: 37866
Number of extensions: 1413140
Number of successful extensions: 9997
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2881
Number of HSP's gapped (non-prelim): 626
length of query: 800
length of database: 18,247,518
effective HSP length: 110
effective length of query: 690
effective length of database: 14,082,258
effective search space: 9716758020
effective search space used: 9716758020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.