Search of human proteins with 9055238

Search of human proteins with 9055238

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9055238 voltage-gated sodium channel beta-3 subunit
precursor [Homo sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9055238 voltage-gated sodium channel beta-3 subunit precursor...   437   e-123
gi|93587332 voltage-gated sodium channel beta-3 subunit precurso...   437   e-123
gi|4506805 sodium channel, voltage-gated, type I, beta isoform a...   182   2e-46
gi|39930610 sodium channel, voltage-gated, type I, beta isoform ...   101   4e-22
gi|4505243 myelin protein zero [Homo sapiens]                          62   5e-10
gi|38093645 myelin protein zero-like 3 [Homo sapiens]                  62   5e-10
gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]        53   2e-07
gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]         53   2e-07
gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]        47   1e-05
gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]         47   1e-05
gi|148664224 adhesion molecule, interacts with CXADR antigen 1 i...    40   0.001
gi|148664207 adhesion molecule, interacts with CXADR antigen 1 i...    40   0.001
gi|4759066 sodium channel, voltage-gated, type II, beta [Homo sa...    40   0.001
gi|62865876 immunoglobulin superfamily, member 11 isoform b [Hom...    40   0.001
gi|62865874 immunoglobulin superfamily, member 11 isoform a [Hom...    37   0.013
gi|21687218 CD300 molecule-like family member g [Homo sapiens]         35   0.037
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s...    35   0.063
gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens]               34   0.082
gi|5901964 HERV-H LTR-associating 2 [Homo sapiens]                     34   0.082
gi|5453613 CD7 antigen precursor [Homo sapiens]                        34   0.11 
gi|11386199 poliovirus receptor-related 3 [Homo sapiens]               34   0.11 
gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]       33   0.14 
gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho...    33   0.14 
gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens]    33   0.14 
gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens]     33   0.14 
gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens]     33   0.14 
gi|14150145 matrix-remodelling associated 8 [Homo sapiens]             33   0.14 
gi|4503053 hyaluronan and proteoglycan link protein 1 [Homo sapi...    33   0.18 
gi|209413732 poliovirus receptor isoform delta [Homo sapiens]          33   0.18 
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]          33   0.18 

>gi|9055238 voltage-gated sodium channel beta-3 subunit precursor
           [Homo sapiens]
          Length = 215

 Score =  437 bits (1124), Expect = e-123
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MPAFNRLFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVV 60
           MPAFNRLFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVV
Sbjct: 1   MPAFNRLFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVV 60

Query: 61  EWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC 120
           EWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC
Sbjct: 61  EWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC 120

Query: 121 NVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYC 180
           NVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYC
Sbjct: 121 NVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYC 180

Query: 181 YRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE 215
           YRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE
Sbjct: 181 YRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE 215


>gi|93587332 voltage-gated sodium channel beta-3 subunit precursor
           [Homo sapiens]
          Length = 215

 Score =  437 bits (1124), Expect = e-123
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MPAFNRLFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVV 60
           MPAFNRLFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVV
Sbjct: 1   MPAFNRLFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVV 60

Query: 61  EWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC 120
           EWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC
Sbjct: 61  EWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC 120

Query: 121 NVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYC 180
           NVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYC
Sbjct: 121 NVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYC 180

Query: 181 YRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE 215
           YRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE
Sbjct: 181 YRKVSKAEEAAQENASDYLAIPSENKENSAVPVEE 215


>gi|4506805 sodium channel, voltage-gated, type I, beta isoform a
           [Homo sapiens]
          Length = 218

 Score =  182 bits (462), Expect = 2e-46
 Identities = 103/206 (50%), Positives = 133/206 (64%), Gaps = 7/206 (3%)

Query: 10  LASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGG 69
           LA +V    VS     CVEV SETEAV G   K+ CISC +R E  A T  EW +R +G 
Sbjct: 5   LALVVGAALVSSACGGCVEVDSETEAVYGMTFKILCISCKRRSETNAETFTEWTFRQKGT 64

Query: 70  KDFL-IYEYRNGHQEVESP--FQGRLQWNGS---KDLQDVSITVLNVTLNDSGLYTCNVS 123
           ++F+ I  Y N   ++E    F+GR+ WNGS   KDLQD+SI + NVT N SG Y C+V 
Sbjct: 65  EEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGDYECHVY 124

Query: 124 REFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYCYRK 183
           R   FE +       + I + V ++A  D  S+VSEIMMY+L+V LT+WL+ EMIYCY+K
Sbjct: 125 RLLFFENYEHNTSVVKKIHIEVVDKANRDMASIVSEIMMYVLIVVLTIWLVAEMIYCYKK 184

Query: 184 VSKA-EEAAQENASDYLAIPSENKEN 208
           ++ A E AAQENAS+YLAI SE+KEN
Sbjct: 185 IAAATETAAQENASEYLAITSESKEN 210


>gi|39930610 sodium channel, voltage-gated, type I, beta isoform b
           [Homo sapiens]
          Length = 268

 Score =  101 bits (252), Expect = 4e-22
 Identities = 62/145 (42%), Positives = 82/145 (56%), Gaps = 6/145 (4%)

Query: 10  LASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGG 69
           LA +V    VS     CVEV SETEAV G   K+ CISC +R E  A T  EW +R +G 
Sbjct: 5   LALVVGAALVSSACGGCVEVDSETEAVYGMTFKILCISCKRRSETNAETFTEWTFRQKGT 64

Query: 70  KDFL-IYEYRNGHQEVESP--FQGRLQWNGS---KDLQDVSITVLNVTLNDSGLYTCNVS 123
           ++F+ I  Y N   ++E    F+GR+ WNGS   KDLQD+SI + NVT N SG Y C+V 
Sbjct: 65  EEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGDYECHVY 124

Query: 124 REFEFEAHRPFVKTTRLIPLRVTEE 148
           R   FE +       + I + V ++
Sbjct: 125 RLLFFENYEHNTSVVKKIHIEVVDK 149


>gi|4505243 myelin protein zero [Homo sapiens]
          Length = 258

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 11/161 (6%)

Query: 25  VCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFL-IYEYRNGHQE 83
           + V    E     G+ + L C S    E V       W Y+PEGG+D + I+ Y  G   
Sbjct: 40  IVVYTDREVHGAVGSRVTLHC-SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPY 98

Query: 84  VES--PFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFVKTTRLI 141
           ++    F+ R+QW G    +D SI + N+  +D+G +TC+V    +       V  T  +
Sbjct: 99  IDEVGTFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDVKNPPD------IVGKTSQV 152

Query: 142 PLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMI-YCY 181
            L V E+    +  V+  ++  +L V L L LL  ++ YC+
Sbjct: 153 TLYVFEKVPTRYGVVLGAVIGGVLGVVLLLLLLFYVVRYCW 193


>gi|38093645 myelin protein zero-like 3 [Homo sapiens]
          Length = 235

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 13/211 (6%)

Query: 7   LFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP 66
           LFPL  ++    V + F + +   +      G  +KL+C +     +V     ++W YRP
Sbjct: 14  LFPLLGVLFFQGVYIVFSLEIRADAHVRGYVGEKIKLKC-TFKSTSDVTDKLTIDWTYRP 72

Query: 67  EGGKDFL-IYEYRN-GHQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSR 124
                 + I+ Y++  +      F+ R+ W G+    D SI++ N T+ D+G ++C V  
Sbjct: 73  PSSSHTVSIFHYQSFQYPTTAGTFRDRISWVGNVYKGDASISISNPTIKDNGTFSCAVKN 132

Query: 125 EFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIYCYRKV 184
             +   + P  + T      VTE     F +++S + +  +LVF+   +++ ++   R  
Sbjct: 133 PPDVHHNIPMTELT------VTERG---FGTMLSSVALLSILVFVPSAVVVALL-LVRMG 182

Query: 185 SKAEEAAQENASDYLAIPSENKENSAVPVEE 215
            KA    + + S Y     E  +++    EE
Sbjct: 183 RKAAGLKKRSRSGYKKSSIEVSDDTDQEEEE 213


>gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 34  EAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESPFQGR 91
           EAV G   +L+C         +A TV  W +RP +GG + F+ Y + +  Q +   F+ R
Sbjct: 36  EAVNGTDARLKCTFSSFAPVGDALTVT-WNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDR 94

Query: 92  LQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
           + W+G+ +  D SI +  +  +D+G YTC V
Sbjct: 95  VSWDGNPERYDASILLWKLQFDDNGTYTCQV 125


>gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 34  EAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESPFQGR 91
           EAV G   +L+C         +A TV  W +RP +GG + F+ Y + +  Q +   F+ R
Sbjct: 36  EAVNGTDARLKCTFSSFAPVGDALTVT-WNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDR 94

Query: 92  LQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
           + W+G+ +  D SI +  +  +D+G YTC V
Sbjct: 95  VSWDGNPERYDASILLWKLQFDDNGTYTCQV 125


>gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]
          Length = 209

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 27  VEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFL-IYEYRNGHQEVE 85
           V  P E     G   KL C            T V W ++PEG    +  + Y  G   + 
Sbjct: 40  VYTPKEIFVANGTQGKLTC-KFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLG 98

Query: 86  S--PFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
           +  PF+ R+ W G  D +D SI + N+    +G Y C+V
Sbjct: 99  NYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDV 137


>gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]
          Length = 269

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 27  VEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFL-IYEYRNGHQEVE 85
           V  P E     G   KL C            T V W ++PEG    +  + Y  G   + 
Sbjct: 40  VYTPKEIFVANGTQGKLTC-KFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLG 98

Query: 86  S--PFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
           +  PF+ R+ W G  D +D SI + N+    +G Y C+V
Sbjct: 99  NYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDV 137


>gi|148664224 adhesion molecule, interacts with CXADR antigen 1
           isoform 2 [Homo sapiens]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 16  IYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFLIY 75
           ++  +V   V  E P E     G  +++ C+   +  EV+  T VEW +     K+ +++
Sbjct: 116 VFKKAVVLHVLPEEPKELMVHVGGLIQMGCV--FQSTEVKHVTKVEWIFSGRRAKEEIVF 173

Query: 76  EYRNG------HQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
            Y +       + +    FQ R+   G     D SI +  V  +D G YTC++
Sbjct: 174 RYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSI 226



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 30  PSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESP 87
           P E     G+   + C+   +  E +    ++W   P E  KD +++Y Y N    +   
Sbjct: 17  PPELTVHVGDSALMGCV--FQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GR 73

Query: 88  FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFV 135
           FQ R+   G     D S+ + +V   D G Y C +  + E +  +  V
Sbjct: 74  FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAV 121


>gi|148664207 adhesion molecule, interacts with CXADR antigen 1
           isoform 1 [Homo sapiens]
          Length = 394

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 16  IYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFLIY 75
           ++  +V   V  E P E     G  +++ C+   +  EV+  T VEW +     K+ +++
Sbjct: 126 VFKKAVVLHVLPEEPKELMVHVGGLIQMGCV--FQSTEVKHVTKVEWIFSGRRAKEEIVF 183

Query: 76  EYRNG------HQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
            Y +       + +    FQ R+   G     D SI +  V  +D G YTC++
Sbjct: 184 RYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSI 236



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 30  PSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESP 87
           P E     G+   + C+   +  E +    ++W   P E  KD +++Y Y N    +   
Sbjct: 27  PPELTVHVGDSALMGCV--FQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GR 83

Query: 88  FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFV 135
           FQ R+   G     D S+ + +V   D G Y C +  + E +  +  V
Sbjct: 84  FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAV 131


>gi|4759066 sodium channel, voltage-gated, type II, beta [Homo
           sapiens]
          Length = 215

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 20/186 (10%)

Query: 27  VEVPSETEAVQGNPMKLRCI--SCMKREEVEATTVVEWFYRPEGG---KDFLIYEYRNGH 81
           V VP+    + G+  +L C   SC      + +  + W Y+       + FL +  +  +
Sbjct: 32  VTVPATLNVLNGSDARLPCTFNSCYTVNHKQFS--LNWTYQECNNCSEEMFLQFRMKIIN 89

Query: 82  QEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFVKTTRLI 141
            ++E  FQ R++++G+    DVS+ + NV   D G+Y C +      + HR   K    I
Sbjct: 90  LKLER-FQDRVEFSGNPSKYDVSVMLRNVQPEDEGIYNCYIMN--PPDRHRGHGK----I 142

Query: 142 PLRVTEEAGEDFTSVVSEIMMYILLVFLTLWLLIEMIY-CYRKVSKAEEAAQENASDYLA 200
            L+V  E   +  S V+ I+   +  FL + +L+ M+  C R+     +  Q+ ++D L 
Sbjct: 143 HLQVLMEEPPERDSTVAVIVGASVGGFLAVVILVLMVVKCVRR-----KKEQKLSTDDLK 197

Query: 201 IPSENK 206
              E K
Sbjct: 198 TEEEGK 203


>gi|62865876 immunoglobulin superfamily, member 11 isoform b [Homo
           sapiens]
          Length = 431

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 9   PLASLVLIYWVSVCFPVCV-EVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP- 66
           PLA L+L+    V   + V E P   +  +G P  L C        +    +  W   P 
Sbjct: 7   PLAPLLLLSLHGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAALINLNVI--WMVTPL 64

Query: 67  -EGGKDFLIYEYRNGHQEVESP-FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVS 123
               +   +  Y+ G     +P F GR+ + G+    +VSI + N  L+D+G Y C V+
Sbjct: 65  SNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQCLVN 123



 Score = 31.2 bits (69), Expect = 0.70
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 16/122 (13%)

Query: 91  RLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFVKTTRLIPLRVTEEAG 150
           +L    ++D    ++T+ N++   SGLY C  S             +T L+ L+V     
Sbjct: 186 KLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIG--------TSTCLLDLQVISPQP 237

Query: 151 EDFTSVVSEIMMYILLVFLTLWLLIEMIYCYRKVSKAEEAAQENASDYLAIPSENKENSA 210
            +   +   I    +++   + L++   + +R  +K EE  +        IP+E +E+  
Sbjct: 238 RNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEE--------IPNEIREDDL 289

Query: 211 VP 212
            P
Sbjct: 290 PP 291


>gi|62865874 immunoglobulin superfamily, member 11 isoform a [Homo
           sapiens]
          Length = 430

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 28  EVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP--EGGKDFLIYEYRNGHQEVE 85
           E P   +  +G P  L C        +    +  W   P     +   +  Y+ G     
Sbjct: 26  ESPGSIQVARGQPAVLPCTFTTSAALINLNVI--WMVTPLSNANQPEQVILYQGGQMFDG 83

Query: 86  SP-FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVS 123
           +P F GR+ + G+    +VSI + N  L+D+G Y C V+
Sbjct: 84  APRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQCLVN 122



 Score = 31.2 bits (69), Expect = 0.70
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 16/122 (13%)

Query: 91  RLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFVKTTRLIPLRVTEEAG 150
           +L    ++D    ++T+ N++   SGLY C  S             +T L+ L+V     
Sbjct: 185 KLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIG--------TSTCLLDLQVISPQP 236

Query: 151 EDFTSVVSEIMMYILLVFLTLWLLIEMIYCYRKVSKAEEAAQENASDYLAIPSENKENSA 210
            +   +   I    +++   + L++   + +R  +K EE  +        IP+E +E+  
Sbjct: 237 RNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEE--------IPNEIREDDL 288

Query: 211 VP 212
            P
Sbjct: 289 PP 290


>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
          Length = 332

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 15/118 (12%)

Query: 13  LVLIYWVSVCFP--VCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGK 70
           L+++ W  +  P    +E P E    +G+ + L+C     REE+        ++  +GG 
Sbjct: 3   LLVLLWGCLLLPGYEALEGPEEISGFEGDTVSLQCTY---REELRDHRK---YWCRKGG- 55

Query: 71  DFLIYEYRNG----HQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSR 124
             +++   +G     +E +   +GR+    S+    + +T+ N+TL D+G Y C V +
Sbjct: 56  --ILFSRCSGTIYAEEEGQETMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVEK 111


>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
           sapiens]
          Length = 387

 Score = 34.7 bits (78), Expect = 0.063
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 38  GNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGS 97
           G+ + L CI        E  ++   F+  +  +   IY  + G       F+ R+   GS
Sbjct: 36  GSNVTLICIYTTTVASREQLSIQWSFFHKKEMEPISIYFSQGGQAVAIGQFKDRI--TGS 93

Query: 98  KDLQDVSITVLNVTLNDSGLYTCNVSREFEF 128
            D  + SIT+ ++   DSG+Y C+V+   +F
Sbjct: 94  NDPGNASITISHMQPADSGIYICDVNNPPDF 124


>gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens]
          Length = 301

 Score = 34.3 bits (77), Expect = 0.082
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 95  NGSKDLQDVSITVLNVTLNDSGLYTCNV 122
           NG     DVS+T+ NVTL DSG+Y C +
Sbjct: 85  NGDFRKGDVSLTIENVTLADSGIYCCRI 112


>gi|5901964 HERV-H LTR-associating 2 [Homo sapiens]
          Length = 414

 Score = 34.3 bits (77), Expect = 0.082
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 13/116 (11%)

Query: 60  VEWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNGSKDL---QDVSITVLNVTLNDSG 116
           V W     G    L Y   +    + +  + R  WN  K+L    D S+ ++++ L+DSG
Sbjct: 258 VTWSRMKSGTFSVLAYYLSSSQNTIIN--ESRFSWN--KELINQSDFSMNLMDLNLSDSG 313

Query: 117 LYTCNVSREFEFEAHRPFVKTTRLIPLRVTEEAGEDFTSVVSEIMMYILLVFLTLW 172
            Y CN+S +   E     + T  + P + T    +    +V      IL  FL +W
Sbjct: 314 EYLCNISSD---EYTLLTIHTVHVEPSQETASHNKGLWILVPSA---ILAAFLLIW 363


>gi|5453613 CD7 antigen precursor [Homo sapiens]
          Length = 240

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 2/38 (5%)

Query: 88  FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSRE 125
           F+GR+ ++GS+D  +++IT+  + L+D+G YTC    E
Sbjct: 84  FRGRIDFSGSQD--NLTITMHRLQLSDTGTYTCQAITE 119


>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
          Length = 549

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 24  PVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFLIYEYRNGHQE 83
           P+ VE      AV G  + L+C+     E  E  T + W          +   +      
Sbjct: 59  PIIVE--PHVTAVWGKNVSLKCLI----EVNETITQISWEKIHGKSSQTVAVHHPQYGFS 112

Query: 84  VESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTC 120
           V+  +QGR+ +  +  L D +IT+ N+  +DSG Y C
Sbjct: 113 VQGEYQGRVLFK-NYSLNDATITLHNIGFSDSGKYIC 148


>gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]
          Length = 365

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 13/117 (11%)

Query: 94  WNGSKDLQDV-SITVLN--VTLNDSGLYTCNVSREFEFEAHRPFVKTTRLIPLRVTEEAG 150
           + GSK +Q   ++T L+  V +N +  YTCNVS    +E+H           L +T++  
Sbjct: 165 YRGSKLIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESH----------TLNLTQDCQ 214

Query: 151 EDFTSVVSEIMMYILLVFLTLWLLIEMIYCYRKVSKAEEAAQENASDYLAIPSENKE 207
                      + I+++   L+L     +C  +  + E+ ++ +  ++L I  + K+
Sbjct: 215 NAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKD 271


>gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo
           sapiens]
          Length = 365

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 27  VEVPSET-EAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKD----FLIYEYRNGH 81
           +  P E  E  +G    L C   +  E+ +    +EW   P   +      ++Y     +
Sbjct: 22  ITTPEEMIEKAKGETAYLPCKFTLSPED-QGPLDIEWLISPADNQKVDQVIILYSGDKIY 80

Query: 82  QEVESPFQGRLQWNGSKDLQ--DVSITVLNVTLNDSGLYTCNVSR 124
            +     +GR+ +  S DL+  D SI V N+ L+D G Y C V +
Sbjct: 81  DDYYPDLKGRVHFT-SNDLKSGDASINVTNLQLSDIGTYQCKVKK 124


>gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens]
          Length = 340

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 47  SCMKREEVEATTVVEWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNG-SKDLQD--- 102
           SC    +  A  +   F+R  G    +++ YR+G  +   PF    Q+ G +K ++D   
Sbjct: 39  SCFLSPKTNAEAMEVRFFR--GQFSSVVHLYRDGKDQ---PFMQMPQYQGRTKLVKDSIA 93

Query: 103 ---VSITVLNVTLNDSGLYTCNVSREFEFE 129
              +S+ + N+T+ D+GLY C +S +  ++
Sbjct: 94  EGRISLRLENITVLDAGLYGCRISSQSYYQ 123


>gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens]
          Length = 500

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 47  SCMKREEVEATTVVEWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNG-SKDLQD--- 102
           SC    +  A  +   F+R  G    +++ YR+G  +   PF    Q+ G +K ++D   
Sbjct: 39  SCFLSPKTNAEAMEVRFFR--GQFSSVVHLYRDGKDQ---PFMQMPQYQGRTKLVKDSIA 93

Query: 103 ---VSITVLNVTLNDSGLYTCNVSREFEFE 129
              +S+ + N+T+ D+GLY C +S +  ++
Sbjct: 94  EGRISLRLENITVLDAGLYGCRISSQSYYQ 123


>gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens]
          Length = 347

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 47  SCMKREEVEATTVVEWFYRPEGGKDFLIYEYRNGHQEVESPFQGRLQWNG-SKDLQD--- 102
           SC    +  A  +   F+R  G    +++ YR+G  +   PF    Q+ G +K ++D   
Sbjct: 39  SCFLSPKTNAEAMEVRFFR--GQFSSVVHLYRDGKDQ---PFMQMPQYQGRTKLVKDSIA 93

Query: 103 ---VSITVLNVTLNDSGLYTCNVSREFEFE 129
              +S+ + N+T+ D+GLY C +S +  ++
Sbjct: 94  EGRISLRLENITVLDAGLYGCRISSQSYYQ 123


>gi|14150145 matrix-remodelling associated 8 [Homo sapiens]
          Length = 442

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 59  VVEWFYRPEGGKDF--LIYEYRNGHQEV-ESPFQGRLQWNGSK-DLQDVSITVLNVTLND 114
           V+ W  R  GG     L+  Y  G Q V E+  +GRL+ + S  D  + S+ +  V   D
Sbjct: 72  VLHWDLRGPGGGPARRLLDLYSAGEQRVYEARDRGRLELSASAFDDGNFSLLIRAVEETD 131

Query: 115 SGLYTCNVSREF 126
           +GLYTCN+   +
Sbjct: 132 AGLYTCNLHHHY 143


>gi|4503053 hyaluronan and proteoglycan link protein 1 [Homo
           sapiens]
          Length = 354

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 81  HQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFE 127
           H++    +QGR+   G  D  D S+ + ++TL D G Y C V    E
Sbjct: 101 HKKTYGGYQGRVFLKGGSD-SDASLVITDLTLEDYGRYKCEVIEGLE 146


>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
          Length = 392

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 7   LFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP 66
           L  +A LVL +       V V+ P++     G+ + L C   +   EV   + + W    
Sbjct: 11  LLLVALLVLSWPPPGTGDVVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHG 70

Query: 67  EGGKDFLIYEYRNGHQEVESPFQGRLQWNGSK---DLQDVSITVLNVTLNDSGLYTC 120
           E G    ++    G    ES    RL++  ++   +L++ S+ +  + + D G YTC
Sbjct: 71  ESG-SMAVFHQTQGPSYSESK---RLEFVAARLGAELRNASLRMFGLRVEDEGNYTC 123


>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
          Length = 364

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 7   LFPLASLVLIYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP 66
           L  +A LVL +       V V+ P++     G+ + L C   +   EV   + + W    
Sbjct: 11  LLLVALLVLSWPPPGTGDVVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHG 70

Query: 67  EGGKDFLIYEYRNGHQEVESPFQGRLQWNGSK---DLQDVSITVLNVTLNDSGLYTC 120
           E G    ++    G    ES    RL++  ++   +L++ S+ +  + + D G YTC
Sbjct: 71  ESG-SMAVFHQTQGPSYSESK---RLEFVAARLGAELRNASLRMFGLRVEDEGNYTC 123


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,938,047
Number of Sequences: 37866
Number of extensions: 331871
Number of successful extensions: 1393
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 1244
Number of HSP's gapped (non-prelim): 255
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.