Guide to the Human Genome
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Name: CYP26B1 Sequence: fasta or formatted (512aa) NCBI GI: 9845285
Description:

cytochrome P450, family 26, subfamily b, polypeptide 1

Referenced in:

Cytochrome P450 Enzymes
Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         30           2
 C cysteine            1.4          7           1
 D aspartate           4.7         24           1
 E glutamate           6.1         31           2
 F phenylalanine       5.1         26           2
 G glycine             7.2         37           3
 H histidine           3.1         16           2
 I isoleucine          4.9         25           1
 K lysine              5.5         28           1
 L leucine            14.1         72           3
 M methionine          2.1         11           1
 N asparagine          2.0         10           1
 P proline             4.3         22           1
 Q glutamine           4.3         22           2
 R arginine            6.2         32           2
 S serine              7.2         37           2
 T threonine           6.2         32           2
 V valine              6.4         33           1
 W tryptophan          1.2          6           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 26, subfamily b, polypeptide ... 
CYP26C1               0.512   cytochrome P450, family 26, subfamily C, polypeptide...
CYP26A1               0.378   cytochrome P450, family 26, subfamily A, polypeptide...
CYP26A1               0.331   cytochrome P450, family 26, subfamily A, polypeptide...
CYP3A43               0.089   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.084   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.082   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP3A5                0.081   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A4                0.080   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4A22               0.077   cytochrome P450, family 4, subfamily A, polypeptide ...
CYP51A1               0.073   cytochrome P450, family 51, subfamily A, polypeptide ...
CYP4A11               0.073   cytochrome P450, family 4, subfamily A, polypeptide...
CYP4Z1                0.070   cytochrome P450 4Z1 
CYP4F11               0.068   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.068   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4V2                0.068   cytochrome P450, family 4, subfamily v, polypeptide...
CYP4F12               0.067   cytochrome P450, family 4, subfamily F, polypeptide...
CYP46A1               0.065   cytochrome P450, family 46 
CYP4F3                0.065   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F22               0.065   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F2                0.064   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4X1                0.063   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP51A1               0.062   cytochrome P450, family 51, subfamily A, polypeptid...
CYP4F8                0.060   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP3A43               0.059   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4B1                0.054   cytochrome P450, family 4, subfamily B, polypeptide...
CYP4B1                0.054   cytochrome P450, family 4, subfamily B, polypeptide...
CYP2R1                0.054   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP2B6                0.054   cytochrome P450, family 2, subfamily B, polypeptide 6...
CYP2S1                0.053   cytochrome P450, family 2, subfamily S, polypeptide ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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