Search of human proteins with 89886464

Search of human proteins with 89886464

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89886464 lipocalcin 12 [Homo sapiens]
         (192 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|89886464 lipocalcin 12 [Homo sapiens]                              403   e-113
gi|38455402 lipocalin 2 [Homo sapiens]                                111   3e-25
gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]                68   4e-12
gi|42714611 lipocalin 15 [Homo sapiens]                                40   0.001
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap...    36   0.023
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom...    32   0.25 
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom...    32   0.25 
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H...    32   0.25 
gi|40255101 solute carrier family 39 (zinc transporter), member ...    30   1.6  
gi|190014617 solute carrier family 39 (zinc transporter), member...    30   1.6  
gi|4504963 lipocalin 1 precursor [Homo sapiens]                        30   1.6  
gi|190885491 zinc finger, SWIM-type containing 4 [Homo sapiens]        29   2.2  
gi|4502163 apolipoprotein D precursor [Homo sapiens]                   29   2.8  
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]        29   2.8  
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]               28   6.3  
gi|194306650 SET domain and mariner transposase fusion [Homo sap...    28   6.3  
gi|11095441 aldehyde dehydrogenase 6A1 precursor [Homo sapiens]        27   8.2  
gi|40385873 G protein-coupled receptor 150 [Homo sapiens]              27   8.2  

>gi|89886464 lipocalcin 12 [Homo sapiens]
          Length = 192

 Score =  403 bits (1035), Expect = e-113
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MRLLCGLWLWLSLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLGLAGNSFRPEHRAL 60
           MRLLCGLWLWLSLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLGLAGNSFRPEHRAL
Sbjct: 1   MRLLCGLWLWLSLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLGLAGNSFRPEHRAL 60

Query: 61  LNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETR 120
           LNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETR
Sbjct: 61  LNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETR 120

Query: 121 VVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFP 180
           VVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFP
Sbjct: 121 VVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFP 180

Query: 181 DVTGWSPQASVC 192
           DVTGWSPQASVC
Sbjct: 181 DVTGWSPQASVC 192


>gi|38455402 lipocalin 2 [Homo sapiens]
          Length = 198

 Score =  111 bits (278), Expect = 3e-25
 Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 10/184 (5%)

Query: 7   LWLWLSLLKVLQAQ----TPTPLPLPP----PMQ-SFQGNQFQGEWFVLGLAGNSFRPEH 57
           LWL L+LL  L AQ    T   +P PP    P+Q +FQ NQFQG+W+V+GLAGN+   E 
Sbjct: 6   LWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILRED 65

Query: 58  RALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDH-GVEPGADR 116
           +     +   +EL +D  + V + + R + CD W    +P  QPG+FT+ +    PG   
Sbjct: 66  KDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKSYPGLTS 125

Query: 117 EETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQGLSDDN 176
              RVV ++Y Q A++  ++ +      +I+L GR+  L     + FI   ++ GL +++
Sbjct: 126 YLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENH 185

Query: 177 IVFP 180
           IVFP
Sbjct: 186 IVFP 189


>gi|32171249 prostaglandin H2 D-isomerase [Homo sapiens]
          Length = 190

 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 4/175 (2%)

Query: 7   LWLWLSLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLGLAGN-SFRPEHRALLNAFT 65
           LW+ L+LL VL      P        +FQ ++F G WF  GLA N S+  E +A L+   
Sbjct: 7   LWMGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMCK 66

Query: 66  ATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETRVVDSD 125
           +    + DG   + +   R   C+T + +L PA   G ++  +            VV++D
Sbjct: 67  SVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYS--YRSPHWGSTYSVSVVETD 124

Query: 126 YTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTL-DQFICLGRAQGLSDDNIVF 179
           Y Q+AL+ S+         R++ L      P   L ++F    +AQG ++D IVF
Sbjct: 125 YDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179


>gi|42714611 lipocalin 15 [Homo sapiens]
          Length = 184

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 20/185 (10%)

Query: 12  SLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLGLAGNSF----RPEHRALLNAFTAT 67
           ++L +L A T     L  P   F   +F G W+V+ +A +      + +H   L+  T  
Sbjct: 8   AILTLLWAPTAQAEVLLQP--DFNAEKFSGLWYVVSMASDCRVFLGKKDH---LSMSTRA 62

Query: 68  FELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETRVVDSDYT 127
              +++G   V         C+      +     G F V     P     + R+VD+DY+
Sbjct: 63  IRPTEEGGLHVHMEFPGADGCNQVDAEYLKVGSEGHFRV-----PALGYLDVRIVDTDYS 117

Query: 128 QFALMLSRRHTSRLAVLRISLLGRSWLLPPGTLDQFICLGRAQGLSDDNIVFPDVTGWSP 187
            FA++   +         + L  R+  + P  L  F       GL  D +V        P
Sbjct: 118 SFAVLYIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLPKDMMVM------LP 171

Query: 188 QASVC 192
           Q+  C
Sbjct: 172 QSDAC 176


>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
           sapiens]
          Length = 352

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 13/176 (7%)

Query: 11  LSLLKVLQAQTPTPLPLPPP----MQSFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTA 66
           L LL    A +  P+P PP      ++F  ++  G+W+   LA  S  P  + +++  T 
Sbjct: 8   LLLLSACLAVSAGPVPTPPDNIQVQENFNISRIYGKWY--NLAIGSTCPWLKKIMDRMTV 65

Query: 67  TFELSDDGRFEVWNAMT----RGQHCDTWSYVLIPAAQPGQFTVDHGVEPGADREETRVV 122
           +  +  +G  E   +MT    R   C+  S         G+F   +         E+ VV
Sbjct: 66  STLVLGEGATEAEISMTSTRWRKGVCEETSGAYEKTDTDGKFL--YHKSKWNITMESYVV 123

Query: 123 DSDYTQFALMLSRRHTSRLA-VLRISLLGRSWLLPPGTLDQFICLGRAQGLSDDNI 177
            ++Y ++A+ L+++ +      +   L GR+  L    L  F  + +  G+ +D+I
Sbjct: 124 HTNYDEYAIFLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPEDSI 179


>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
           sapiens]
          Length = 622

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 46  LGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMT--RGQHCDTWSYVLIPAAQPGQ 103
           L +   S R +H+  +      F + + G+    N  +  +G    + +    PAA+PG 
Sbjct: 105 LDIYARSVRRQHKTPVRDVRDVFGVFNSGKMSSENGDSGMKGAQLSSGASKFPPAAEPG- 163

Query: 104 FTVDHGVEPGADREETRVVDSDYT-QFALMLSRRHTSR 140
                G++  A REE   +DS Y+ Q A++L R   SR
Sbjct: 164 -----GLQEQAGREEAFNMDSAYSEQAAVLLQRSRPSR 196


>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
           sapiens]
          Length = 622

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 46  LGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMT--RGQHCDTWSYVLIPAAQPGQ 103
           L +   S R +H+  +      F + + G+    N  +  +G    + +    PAA+PG 
Sbjct: 105 LDIYARSVRRQHKTPVRDVRDVFGVFNSGKMSSENGDSGMKGAQLSSGASKFPPAAEPG- 163

Query: 104 FTVDHGVEPGADREETRVVDSDYT-QFALMLSRRHTSR 140
                G++  A REE   +DS Y+ Q A++L R   SR
Sbjct: 164 -----GLQEQAGREEAFNMDSAYSEQAAVLLQRSRPSR 196


>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
           sapiens]
          Length = 622

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 46  LGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMT--RGQHCDTWSYVLIPAAQPGQ 103
           L +   S R +H+  +      F + + G+    N  +  +G    + +    PAA+PG 
Sbjct: 105 LDIYARSVRRQHKTPVRDVRDVFGVFNSGKMSSENGDSGMKGAQLSSGASKFPPAAEPG- 163

Query: 104 FTVDHGVEPGADREETRVVDSDYT-QFALMLSRRHTSR 140
                G++  A REE   +DS Y+ Q A++L R   SR
Sbjct: 164 -----GLQEQAGREEAFNMDSAYSEQAAVLLQRSRPSR 196


>gi|40255101 solute carrier family 39 (zinc transporter), member 13
           isoform b [Homo sapiens]
          Length = 364

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 45  VLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPG 102
           +LG AG S      AL +  TAT    D+   E W A+  G+  DTW   L+ +   G
Sbjct: 26  LLGRAGGS----QPALRSRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLMVG 79


>gi|190014617 solute carrier family 39 (zinc transporter), member 13
           isoform a [Homo sapiens]
          Length = 371

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 45  VLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPG 102
           +LG AG S      AL +  TAT    D+   E W A+  G+  DTW   L+ +   G
Sbjct: 26  LLGRAGGS----QPALRSRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLMVG 79


>gi|4504963 lipocalin 1 precursor [Homo sapiens]
          Length = 176

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 7/140 (5%)

Query: 41  GEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQ 100
           G W++  +  +   PE   L +    T    + G  E    M     C     VL    +
Sbjct: 33  GTWYLKAMTVDREFPEMN-LESVTPMTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDE 91

Query: 101 PGQFTVDHGVEPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTL 160
           PG++T D G      +    ++ S      +           V  + L+GR        L
Sbjct: 92  PGKYTADGG------KHVAYIIRSHVKDHYIFYCEGELHGKPVRGVKLVGRDPKNNLEAL 145

Query: 161 DQFICLGRAQGLSDDNIVFP 180
           + F     A+GLS ++I+ P
Sbjct: 146 EDFEKAAGARGLSTESILIP 165


>gi|190885491 zinc finger, SWIM-type containing 4 [Homo sapiens]
          Length = 989

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 14  LKVLQAQTPTPLPLPPPMQSFQGNQFQGEWFVLG 47
           L +L+   P   P P P+ S   N+F   WF+LG
Sbjct: 571 LPILETAFPAGEPHPSPLDSIMSNRFP-RWFILG 603


>gi|4502163 apolipoprotein D precursor [Homo sapiens]
          Length = 189

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 19/144 (13%)

Query: 26  PLPPPMQSFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRG 85
           P PP  ++F  N++ G W+ +     +F            A + L ++G+ +V N   R 
Sbjct: 29  PNPPVQENFDVNKYLGRWYEIEKIPTTFENG-----RCIQANYSLMENGKIKVLNQELR- 82

Query: 86  QHCDTWSYVLIPAAQPGQFTVDHGVE-------PGADREETRVVDSDYTQFALMLSRRHT 138
              D     +   A P   T    +E       P A      ++ +DY  +AL+ S    
Sbjct: 83  --ADGTVNQIEGEATPVNLTEPAKLEVKFSWFMPSA---PYWILATDYENYALVYSCTCI 137

Query: 139 SRLAVLRIS-LLGRSWLLPPGTLD 161
            +L  +  + +L R+  LPP T+D
Sbjct: 138 IQLFHVDFAWILARNPNLPPETVD 161


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 22  PTPLPLPPPMQSFQGNQFQGEWFVLG-LAGNSFRPEHRALLNAFTAT 67
           P PLPLPPP   F              L+G++ R    ALL++ T++
Sbjct: 348 PPPLPLPPPPPPFSPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSS 394


>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
          Length = 533

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 14/59 (23%)

Query: 24  PLPLP----PPMQSFQGNQFQGEWFVLGLAGNSFRPEHRALLNAFTATFELSDDGRFEV 78
           PLPLP    PP  + + N    EW+V  +     RPE  A L       +++ DG F V
Sbjct: 399 PLPLPNKPRPPSPAEEENSLNEEWYVSYIT----RPEAEAALR------KINQDGTFLV 447


>gi|194306650 SET domain and mariner transposase fusion [Homo
           sapiens]
          Length = 684

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 98  AAQPGQFTVDHGVEPGADREETRV 121
           A  P Q+T DH V PGAD + T++
Sbjct: 47  APAPFQYTPDHVVGPGADIDPTQI 70


>gi|11095441 aldehyde dehydrogenase 6A1 precursor [Homo sapiens]
          Length = 535

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 13  LLKVLQAQTPTPLPLPPPMQSFQGNQ--FQGEWFVLGLAGNSF 53
           L+ V Q     P+P+P PM SF G++  F+G+    G  G  F
Sbjct: 463 LVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQF 505


>gi|40385873 G protein-coupled receptor 150 [Homo sapiens]
          Length = 434

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 4   LCGLWLWLSLLKVLQAQTPTPLPLPPPMQSFQ 35
           L  L L L    V++  +P+PLP PPP  S Q
Sbjct: 170 LLALLLALPPAFVVRGDSPSPLPPPPPPTSLQ 201


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,645,280
Number of Sequences: 37866
Number of extensions: 379971
Number of successful extensions: 1473
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 21
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.