LCN1 28947

Name: LCN1	Sequence: fasta or formatted (176aa)		NCBI GI: 4504963
Description: lipocalin 1 precursor		Referenced in: Lacrimal and Salivary Glands
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 14 2 C cysteine 1.7 3 1 D aspartate 5.1 9 1 E glutamate 9.7 17 2 F phenylalanine 1.7 3 1 G glycine 8.5 15 2 H histidine 3.4 6 2 I isoleucine 4.5 8 2 K lysine 6.8 12 1 L leucine 11.9 21 3 M methionine 2.8 5 1 N asparagine 2.3 4 2 P proline 4.5 8 1 Q glutamine 2.3 4 1 R arginine 4.0 7 1 S serine 6.2 11 1 T threonine 6.2 11 2 V valine 6.8 12 1 W tryptophan 0.6 1 1 Y tyrosine 2.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lipocalin 1 precursor OBP2B 0.375 odorant binding protein 2B OBP2A 0.360 odorant binding protein 2A precursor AMBP 0.098 alpha-1-microglobulin/bikunin preproprotein LCN15 0.061 lipocalin 15 LCN9 0.055 lipocalin 9 LOC100129193 0.052 PREDICTED: similar to hCG1795014 LOC100129193 0.052 PREDICTED: similar to hCG1795014 LOC100129193 0.052 PREDICTED: similar to hCG1795014 PAEP 0.034 glycodelin precursor PAEP 0.034 glycodelin precursor LCN8 0.024 lipocalin 8 LCN6 0.024 lipocalin 6 LCN12 0.015 lipocalcin 12 VPS37C 0.012 vacuolar protein sorting 37C GOT1 0.009 aspartate aminotransferase 1 TMEM132B 0.009 transmembrane protein 132B LCN10 0.009 lipocalin 10 IFI44 0.009 interferon-induced, hepatitis C-associated microtub... DDX19B 0.006 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.