Guide to the Human Genome
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Name: ALDH6A1 Sequence: fasta or formatted (535aa) NCBI GI: 11095441
Description:

aldehyde dehydrogenase 6A1 precursor

Referenced in:

Amino Acid Catabolism
Alcohol and Aldehyde Dehydrogenases
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         53           4
 C cysteine            1.5          8           1
 D aspartate           3.9         21           1
 E glutamate           5.0         27           2
 F phenylalanine       3.9         21           1
 G glycine             8.2         44           2
 H histidine           1.7          9           1
 I isoleucine          5.8         31           2
 K lysine              6.4         34           2
 L leucine             8.0         43           2
 M methionine          3.6         19           2
 N asparagine          5.0         27           3
 P proline             5.6         30           1
 Q glutamine           3.9         21           2
 R arginine            3.7         20           1
 S serine              6.5         35           3
 T threonine           6.0         32           2
 V valine              8.0         43           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 6A1 precursor 
ALDH8A1               0.190   aldehyde dehydrogenase 8A1 isoform 1 
ALDH1A3               0.190   aldehyde dehydrogenase 1A3 
ALDH1B1               0.188   aldehyde dehydrogenase 1B1 precursor 
ALDH1A1               0.188   aldehyde dehydrogenase 1A1 
ALDH9A1               0.187   aldehyde dehydrogenase 9A1 
ALDH1A2               0.184   aldehyde dehydrogenase 1A2 isoform 1 
ALDH2                 0.174   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH5A1               0.166   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.157   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH1L2               0.156   aldehyde dehydrogenase 1 family, member L2 
ALDH8A1               0.153   aldehyde dehydrogenase 8A1 isoform 2 
ALDH1A2               0.150   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1A2               0.149   aldehyde dehydrogenase 1A2 isoform 2 
ALDH1L1               0.142   aldehyde dehydrogenase 1 family, member L1 
ALDH7A1               0.125   aldehyde dehydrogenase 7 family, member A1 
ALDH16A1              0.077   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH3A1               0.075   aldehyde dehydrogenase 3A1 
ALDH3A1               0.075   aldehyde dehydrogenase 3A1 
ALDH3A1               0.075   aldehyde dehydrogenase 3A1 
ALDH3B2               0.066   aldehyde dehydrogenase 3B2 
ALDH3B2               0.066   aldehyde dehydrogenase 3B2 
ALDH3A2               0.066   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.066   aldehyde dehydrogenase 3A2 isoform 1 
ALDH3B1               0.061   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.061   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.061   aldehyde dehydrogenase 3B1 isoform a 
ALDH4A1               0.057   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.057   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.057   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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