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Search of human proteins with 89886201
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89886201 hypothetical protein LOC642938 [Homo sapiens]
(479 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89886201 hypothetical protein LOC642938 [Homo sapiens] 974 0.0
gi|193788653 hypothetical protein LOC100131897 [Homo sapiens] 120 3e-27
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 0.001
gi|239753123 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens] 41 0.003
gi|239747686 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens] 41 0.003
gi|239741555 PREDICTED: kelch repeat and BTB (POZ) domain contai... 41 0.003
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.014
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.014
gi|50345997 E1A binding protein p300 [Homo sapiens] 38 0.023
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 38 0.023
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens] 37 0.030
gi|21389535 T-complex 10A-2 [Homo sapiens] 37 0.052
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 36 0.068
gi|91208420 bassoon protein [Homo sapiens] 36 0.088
gi|194097398 protein tyrosine phosphatase, receptor type, G prec... 35 0.12
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.12
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.12
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.12
gi|60460889 Myb protein P42POP [Homo sapiens] 35 0.15
gi|14149696 SEC31 homolog B [Homo sapiens] 35 0.15
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 34 0.26
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 34 0.34
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 34 0.34
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 34 0.34
gi|223468602 t-complex 10-like 2 [Homo sapiens] 33 0.44
gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo ... 33 0.44
gi|150170670 piccolo isoform 2 [Homo sapiens] 33 0.44
gi|150378539 piccolo isoform 1 [Homo sapiens] 33 0.44
gi|124378039 SEC16 homolog A [Homo sapiens] 33 0.57
gi|239756966 PREDICTED: similar to arg tyrosine kinase [Homo sap... 33 0.57
>gi|89886201 hypothetical protein LOC642938 [Homo sapiens]
Length = 479
Score = 974 bits (2519), Expect = 0.0
Identities = 479/479 (100%), Positives = 479/479 (100%)
Query: 1 MVSKDTGKCILTTSESEVEPAACLALEMKYALDPNRQIKKRNKALQVRFKDICEAQNEQR 60
MVSKDTGKCILTTSESEVEPAACLALEMKYALDPNRQIKKRNKALQVRFKDICEAQNEQR
Sbjct: 1 MVSKDTGKCILTTSESEVEPAACLALEMKYALDPNRQIKKRNKALQVRFKDICEAQNEQR 60
Query: 61 DTQLSSGQLGEKREAKPVSCRAAYRKYMTVPARRSIPNVTKSTGVQTSPDLKKCYQTFPL 120
DTQLSSGQLGEKREAKPVSCRAAYRKYMTVPARRSIPNVTKSTGVQTSPDLKKCYQTFPL
Sbjct: 61 DTQLSSGQLGEKREAKPVSCRAAYRKYMTVPARRSIPNVTKSTGVQTSPDLKKCYQTFPL 120
Query: 121 DRKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAGPMEEARPCGAGRVHKTTALVFHSNQH 180
DRKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAGPMEEARPCGAGRVHKTTALVFHSNQH
Sbjct: 121 DRKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAGPMEEARPCGAGRVHKTTALVFHSNQH 180
Query: 181 MNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSEEP 240
MNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSEEP
Sbjct: 181 MNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSEEP 240
Query: 241 APPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAP 300
APPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAP
Sbjct: 241 APPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAP 300
Query: 301 SETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAAGEECQRIVPHTEVVDLKA 360
SETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAAGEECQRIVPHTEVVDLKA
Sbjct: 301 SETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAAGEECQRIVPHTEVVDLKA 360
Query: 361 QLQMMENLISSSQETIKVLLGVIQELEKGEAHREGLSYRTGQDTANCDTCRNSACIIYSV 420
QLQMMENLISSSQETIKVLLGVIQELEKGEAHREGLSYRTGQDTANCDTCRNSACIIYSV
Sbjct: 361 QLQMMENLISSSQETIKVLLGVIQELEKGEAHREGLSYRTGQDTANCDTCRNSACIIYSV 420
Query: 421 ELDFKQQEDKLQPVLRKLHPIEETQVIPSPYSQETYSSTPKQKSKTESKKHGRWKLWFL 479
ELDFKQQEDKLQPVLRKLHPIEETQVIPSPYSQETYSSTPKQKSKTESKKHGRWKLWFL
Sbjct: 421 ELDFKQQEDKLQPVLRKLHPIEETQVIPSPYSQETYSSTPKQKSKTESKKHGRWKLWFL 479
>gi|193788653 hypothetical protein LOC100131897 [Homo sapiens]
Length = 535
Score = 120 bits (301), Expect = 3e-27
Identities = 133/513 (25%), Positives = 196/513 (38%), Gaps = 80/513 (15%)
Query: 40 KRNKALQVRFKDICEAQNEQRDTQLSSGQLGEKREAKPVSCRAAYRKYMTVPARRSIPNV 99
+R+K+ QVRFK+ +N T L+ + + + A R ++ S P
Sbjct: 30 RRSKSQQVRFKEDGTTKNP---TGLAEVDVQTPEDPAVMGKTQATRHHLPPTYSLSFPRS 86
Query: 100 TKSTG-----VQTSPDLKKCYQTFPLDRKKGN--LKSLPAADPFKSQNNG---------- 142
K+ G +QTSP L+K + F R + L +P A Q NG
Sbjct: 87 QKAGGFRNIAIQTSPSLRKHFPVFKRKRLTASKSLVEMPTASQSAIQVNGNLSEQDIVSS 146
Query: 143 -----------------------FLTDAKEKNEAGPMEEARPCGAGR-VHKTTALVFHSN 178
FL + GP+ G R + K TA + +
Sbjct: 147 DLAYLRLAQHLEDGPRRVKVSHAFLPRVPKVQSNGPVSICLEAGTWRSLEKATAAIQVPD 206
Query: 179 QHMNTVDQPLGVNCTEPCKSPE------PLSYGEAALQNSTRPPSEEPDYQLLGRAKQDR 232
++ + P +S E PL P E L
Sbjct: 207 DIYHSPSWEARESALSPDRSAEVSNSIHPLDDTRPGDGRRVTPLDSEKSTSCLNATSVAS 266
Query: 233 GRPNSEEPAPPALRRVFKT-------------EVATVYAPALSARAPEPGLSDSAAASQW 279
P +EE P L + E +P + + S A +
Sbjct: 267 HTPGTEELKPELLLPKDNSDDKDLGSLSSQSKETCVPSSPRTHSSPSQGSHSQPAHPGRA 326
Query: 280 SLCPADDERRRATHLNGLQAPSETALACSP-----PMQCLSPECSEQPSQTHTPPGLGNQ 334
S CP+ + + S++A C P + + E P H P L
Sbjct: 327 SDCPSSSNNHQNLVSLKTNSASKSAPGCQEQTANNPTESDTLEFPNCPGSNHLPSSLSR- 385
Query: 335 PSPTAVAAGEECQRI----VPHTEVVDLKAQLQMMENLISSSQETIKVLLGVIQELEKGE 390
S T + + E I + E+ DL+ +LQ +E + S+QE IKVLL VIQ+LEK
Sbjct: 386 -SETKLQSNREISDINQIHLARGELCDLQGRLQSVEESLHSNQEKIKVLLNVIQDLEKAR 444
Query: 391 AHREGLS-YRTGQDTANCDTCRNSACIIYSVELDFKQQEDKLQPVLRKL---HPIEETQV 446
A EG + YRTGQD NC TC+N+ACIIYSVE DF+QQE + VL+ L P+EE
Sbjct: 445 ALTEGRNFYRTGQDLNNCSTCQNTACIIYSVEYDFRQQEGRFHEVLQSLEEAEPVEEAS- 503
Query: 447 IPSPYSQETYSSTPKQKSKTESKKHGRWKLWFL 479
P P S + KQ + ++KK + W++
Sbjct: 504 -PPPKSPAEPPAPEKQDLRRKTKKVKKKCFWWI 535
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 0.001
Identities = 61/215 (28%), Positives = 83/215 (38%), Gaps = 24/215 (11%)
Query: 142 GFLTDAKEKNEAGPMEEARPCGAGRVHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEP 201
G T + AGP +RP +GR + N V P + T P P
Sbjct: 66 GGATIPESAPRAGPTRTSRPPASGRGERAPPA---KNTSPGPVSSPGRASGTT---RPGP 119
Query: 202 LSYGEAALQNSTRPP------SEEPDYQLLGR-AKQDRGRPNSEEPAPPALRR--VFKTE 252
L G+ L+ S +E P L A++D P P+P RR TE
Sbjct: 120 L--GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177
Query: 253 VATVY-APALSARAPEPG--LSDSAAASQWSLCPADDERRRATHLNGLQAPSETALACSP 309
V AP+ R P G S S+A+ + P+ RRR + GLQ P+ +L+ S
Sbjct: 178 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 310 PMQCLSPECSEQPSQTHTP--PGLGNQPSPTAVAA 342
LS PS TP P +QP P + A
Sbjct: 238 TP--LSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270
>gi|239753123 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens]
Length = 875
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 17/206 (8%)
Query: 155 PMEEARPCGAGRVHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTR 214
P PC G T+LV S + T + ++ + +G+ + ST
Sbjct: 66 PATAPAPCTTGSSEAITSLVASSASAVTTKAPGISKGDSQSQGLATSIRWGQTPINQSTP 125
Query: 215 PPSEEPDYQLLGRAKQDRGRPNSEEPA----PPALRRVFKTEVATVYAPALSARAPEPGL 270
++EP + + + P A P + + ++PA++ +AP G+
Sbjct: 126 WDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPTLIAHSYGVAQPPTFSPAVNVQAPVIGV 185
Query: 271 SDSA---AASQWSLCPADDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHT 327
+ S Q L P H + Q PS+ + M + S QP T
Sbjct: 186 TPSLPPHVGPQLPLMPG--------HYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVST 237
Query: 328 PPGLGN--QPSPTAVAAGEECQRIVP 351
PG+G +P PTAV G ++P
Sbjct: 238 LPGVGQVARPGPTAVGNGHMAGPLLP 263
>gi|239747686 PREDICTED: kelch-like 29 (Drosophila) [Homo sapiens]
Length = 702
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 17/206 (8%)
Query: 155 PMEEARPCGAGRVHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTR 214
P PC G T+LV S + T + ++ + +G+ + ST
Sbjct: 66 PATAPAPCTTGSSEAITSLVASSASAVTTKAPGISKGDSQSQGLATSIRWGQTPINQSTP 125
Query: 215 PPSEEPDYQLLGRAKQDRGRPNSEEPA----PPALRRVFKTEVATVYAPALSARAPEPGL 270
++EP + + + P A P + + ++PA++ +AP G+
Sbjct: 126 WDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPTLIAHSYGVAQPPTFSPAVNVQAPVIGV 185
Query: 271 SDSA---AASQWSLCPADDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHT 327
+ S Q L P H + Q PS+ + M + S QP T
Sbjct: 186 TPSLPPHVGPQLPLMPG--------HYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVST 237
Query: 328 PPGLGN--QPSPTAVAAGEECQRIVP 351
PG+G +P PTAV G ++P
Sbjct: 238 LPGVGQVARPGPTAVGNGHMAGPLLP 263
>gi|239741555 PREDICTED: kelch repeat and BTB (POZ) domain
containing 9 [Homo sapiens]
Length = 875
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 17/206 (8%)
Query: 155 PMEEARPCGAGRVHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTR 214
P PC G T+LV S + T + ++ + +G+ + ST
Sbjct: 66 PATAPAPCTTGSSEAITSLVASSASAVTTKAPGISKGDSQSQGLATSIRWGQTPINQSTP 125
Query: 215 PPSEEPDYQLLGRAKQDRGRPNSEEPA----PPALRRVFKTEVATVYAPALSARAPEPGL 270
++EP + + + P A P + + ++PA++ +AP G+
Sbjct: 126 WDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPTLIAHSYGVAQPPTFSPAVNVQAPVIGV 185
Query: 271 SDSA---AASQWSLCPADDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHT 327
+ S Q L P H + Q PS+ + M + S QP T
Sbjct: 186 TPSLPPHVGPQLPLMPG--------HYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVST 237
Query: 328 PPGLGN--QPSPTAVAAGEECQRIVP 351
PG+G +P PTAV G ++P
Sbjct: 238 LPGVGQVARPGPTAVGNGHMAGPLLP 263
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.5 bits (88), Expect = 0.014
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 228 AKQDRGRPNSEEPAPPALRR--VFKTEVATVY-APALSARAPEPG--LSDSAAASQWSLC 282
A++D P P+P RR TEV AP+ R P G S S+A+ +
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 219
Query: 283 PADDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTP--PGLGNQPSPTAV 340
P+ RRR + GLQ P+ +L+ S LS PS TP P +QP P +
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATP--LSSPARSGPSARGTPRAPAHPSQPKPKGL 277
Query: 341 AA 342
A
Sbjct: 278 QA 279
Score = 30.0 bits (66), Expect = 4.8
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 9/105 (8%)
Query: 232 RGRPNS----EEPAPPALRRVFKTEVATVY---APALSARAPEPGLSDSAAASQWSLCPA 284
RG P + +P P L+ + +V APAL + P + S +A+ S P
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319
Query: 285 DDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPP 329
H + L T L +PP P PS TPP
Sbjct: 320 T--LPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPP 362
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.5 bits (88), Expect = 0.014
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 228 AKQDRGRPNSEEPAPPALRR--VFKTEVATVY-APALSARAPEPG--LSDSAAASQWSLC 282
A++D P P+P RR TEV AP+ R P G S S+A+ +
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 219
Query: 283 PADDERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTP--PGLGNQPSPTAV 340
P+ RRR + GLQ P+ +L+ S LS PS TP P +QP P +
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATP--LSSPARSGPSARGTPRAPAHPSQPKPKGL 277
Query: 341 AA 342
A
Sbjct: 278 QA 279
Score = 29.6 bits (65), Expect = 6.3
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 13/112 (11%)
Query: 232 RGRPNS----EEPAPPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDE 287
RG P + +P P L+ + +V A A P LS S A+ P+ +
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP---LSSSPLATP---SPSGTK 313
Query: 288 RRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTA 339
R + P L SPP+ P PS PP L PSP A
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPS---APPSLQTLPSPPA 362
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 37.7 bits (86), Expect = 0.023
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 36/159 (22%)
Query: 183 TVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDY----QLLGRAKQDRGRPNSE 238
T P G T P ++P+P S Q PP+ P Y Q G Q +
Sbjct: 1854 TPTTPTGQQPTTP-QTPQPTS------QPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVT 1906
Query: 239 EPAPPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQ 298
P PP +A+ P PG +A + A + +R+ H+ Q
Sbjct: 1907 PPTPPQ-----------------TAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQ 1949
Query: 299 APSETALACSPPMQCLSPECSEQPSQT-----HTPPGLG 332
P + + PPM ++P P T H PG+G
Sbjct: 1950 RPIQHQM---PPMTPMAPMGMNPPPMTRGPSGHLEPGMG 1985
Score = 33.1 bits (74), Expect = 0.57
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 290 RATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAAGEECQRI 349
++ HL G Q P+ + P SP QP + P + QPSP V+ Q
Sbjct: 2290 QSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSP----QTS 2345
Query: 350 VPHTEVVDLKAQLQMMENLISSSQETI 376
PH +V +A + S Q ++
Sbjct: 2346 SPHPGLVAAQANPMEQGHFASPDQNSM 2372
Score = 32.0 bits (71), Expect = 1.3
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 21/103 (20%)
Query: 265 APEPGLSD-SAAASQWSLCPADDE----RRRATHLNGLQAPSETALACSPPMQCLSPECS 319
AP G + S A S CP + + +H++ Q P SP SP S
Sbjct: 783 APSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSP-----SPVPS 837
Query: 320 EQPSQTHTPPGLGNQ-----------PSPTAVAAGEECQRIVP 351
P+ HTPP +G Q P+P A+ G + Q + P
Sbjct: 838 RTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQALHP 880
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 37.7 bits (86), Expect = 0.023
Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 13/211 (6%)
Query: 201 PLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGR-PNSEEPAPPALRRVFKTEVATVYAP 259
P + + +S P SE G + G P S PP +++ P
Sbjct: 264 PADISKPWIPSSPAPSSENGGPASPGLPAEASGSGPGSPHLHPPDKSSPCHSQLLEAQTP 323
Query: 260 ALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAPS--ETALACSPPMQCLSPE 317
S +P P ++ SA ++ DE R T GL A E SPP + L P
Sbjct: 324 EASQASPCPAVTPSAPSAA-----LPDEGSRHTPSPGLPAEGAPEAPRPSSPPPEVLEPH 378
Query: 318 CSEQPSQTHTPP----GLGNQPSPTAVAAGEECQRIVPHTEVVDLKAQLQMMENLISSSQ 373
+QP T P G + T + GEE + H L Q + E ++ S
Sbjct: 379 SLDQPPATSPRPLIEVGELLDLTRTFPSGGEEEAKGDAHLRPTSL-VQRRFSEGVLQSPS 437
Query: 374 ETIKVLLGVIQELEKGEAHREGLSYRTGQDT 404
+ + L G + L +G+ + L G ++
Sbjct: 438 QDQEKLGGSLAALPQGQGSQLALDRPFGAES 468
>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
Length = 574
Score = 37.4 bits (85), Expect = 0.030
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 31/172 (18%)
Query: 137 KSQNNGFLTDAKEKNEAGPMEEARPCGAGRV-----HKTTALVFHSNQHMNTVDQPLGVN 191
K G L+ K G +++ P G+ + + T+L +Q ++ QPLG+
Sbjct: 412 KDSPTGTLSSPKHLRPKGQLQKEPPAGSCMLGGLSLQEVTSLAMEESQEAKSLHQPLGI- 470
Query: 192 CTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSEEPAPPALRRVFKT 251
CT+ P L GE P + LL + Q G P S PP+
Sbjct: 471 CTDRTSDPNVLHSGEEG-----TPQYLKGQLPLLS-SVQIEGHPMSLPLQPPS------- 517
Query: 252 EVATVYAPALSARAPEP-GLSDSAAASQWSLCPADDERRRATHLNGLQAPSE 302
+ S + P P GL +S +CP D+ + A + L+ P+E
Sbjct: 518 -----RPCSPSDQGPSPWGLLESL------VCPKDEAKSPAPETSDLEQPTE 558
>gi|21389535 T-complex 10A-2 [Homo sapiens]
Length = 215
Score = 36.6 bits (83), Expect = 0.052
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 19/141 (13%)
Query: 110 DLKKCYQTFPLDRKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAGPM---EEARPCGAGR 166
+L++ + L R K KS AA P Q + L + P+ EE P AG
Sbjct: 88 ELREKLRALQLQRWKARKKS--AASPHAGQESHTLALEPAFGKISPLSADEETIPKYAG- 144
Query: 167 VHKTTALVFHSNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLG 226
H NQ + Q N + P P+P+S + + PP E D L
Sbjct: 145 ---------HKNQSATLLGQRSSSNNSAP---PKPMSLKIERISSWKTPPQENRDKNL-S 191
Query: 227 RAKQDRGRPNSEEPAPPALRR 247
R +QDR + P P A RR
Sbjct: 192 RRRQDRRATPTGRPTPCAERR 212
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 36.2 bits (82), Expect = 0.068
Identities = 65/260 (25%), Positives = 85/260 (32%), Gaps = 43/260 (16%)
Query: 131 PAADPFKSQNNGFLTDAKEKNEAGPMEEARPCGAGRVHKTTALVFHSNQHMNTVDQPLGV 190
PA+ P N+ L + P+ + P TT S + PL V
Sbjct: 1410 PASSPMPIPNSSPLASPVSSTVSVPLSSSLPISV----PTTLPAPASAPLTIPISAPLTV 1465
Query: 191 NC---------TEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRA-----KQDRGRPN 236
+ T P P + G +L S PS L A Q G P
Sbjct: 1466 SASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPL 1525
Query: 237 SEEPAP---PALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADD-ERRRAT 292
P P L + V PA + +P P + A A L PA + AT
Sbjct: 1526 LLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALAT 1585
Query: 293 HLNGLQAPSETALACSP-----PMQCLSPECSEQP----SQTHTP-------PG-----L 331
L + AP LA SP P+ L+P P SQT P PG
Sbjct: 1586 PLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASA 1645
Query: 332 GNQPSPTAVAAGEECQRIVP 351
P+PT V A Q ++P
Sbjct: 1646 SPVPAPTPVLAPSSTQTMLP 1665
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 35.8 bits (81), Expect = 0.088
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 175 FHSNQHMNTVDQPLGVNCTEPCK-----SPEPLSYGEAALQNSTRPPSEEPDYQLLGRAK 229
F+ N H+ V + L +NC + P S + L + P+ P Q LG+
Sbjct: 203 FNPNPHLTQVKEWLCLNCQMQRALGMDMTTAPRSKSQQQLHSPALSPAHSPAKQPLGKPD 262
Query: 230 QDRGR-PNSEEPAPPALRRVFKTEVATVYAPALSARAPEPG 269
Q+R R P +P R+ +V PA +A PE G
Sbjct: 263 QERSRGPGGPQPGS---RQAETARATSVPGPAQAAAPPEVG 300
>gi|194097398 protein tyrosine phosphatase, receptor type, G
precursor [Homo sapiens]
Length = 1445
Score = 35.4 bits (80), Expect = 0.12
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 11/153 (7%)
Query: 3 SKDTGKCILTTSESEVEPAACLALEMKYALDPNRQIKKRNKALQVRFKDI-CEAQNEQRD 61
SK + +L T+E+ P D + K + + KD E+++ +R+
Sbjct: 545 SKQAARPVLATTEALASPGP----------DGDSSPTKDGEGTEEGEKDEKSESEDGERE 594
Query: 62 TQLSSGQLGEKREAKPVSCRAAYRKYMTVPARRSIPNVTKSTGVQTSPDLKKCYQTFPLD 121
+ + EK+E V+ A R S PN T G QT P ++ + P D
Sbjct: 595 HEEDGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTD 654
Query: 122 RKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAG 154
+ G + P DP + A E+ AG
Sbjct: 655 QTGGRRDAGPGLDPDMVTSTQVPPTATEEQYAG 687
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 35.4 bits (80), Expect = 0.12
Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 17/156 (10%)
Query: 194 EPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDR---GRPNSEEPAPPALRRV-- 248
+P P S G+A L T P + P L A Q +P E+P PPA +
Sbjct: 316 QPFGLPPQASQGQAPL--GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 373
Query: 249 FKTEVATVYA--PALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAPSETALA 306
K T PA A P LS + S + P + + L+ PS A
Sbjct: 374 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPS----A 429
Query: 307 CSPPMQCLSPECSEQPSQTHTPPGL---GNQPSPTA 339
PP+Q L P+ PS PPGL N P P A
Sbjct: 430 HPPPLQ-LMPQSQPLPSSPAQPPGLTQSQNLPPPPA 464
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 35.4 bits (80), Expect = 0.12
Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 17/156 (10%)
Query: 194 EPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDR---GRPNSEEPAPPALRRV-- 248
+P P S G+A L T P + P L A Q +P E+P PPA +
Sbjct: 870 QPFGLPPQASQGQAPL--GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927
Query: 249 FKTEVATVYA--PALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAPSETALA 306
K T PA A P LS + S + P + + L+ PS A
Sbjct: 928 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPS----A 983
Query: 307 CSPPMQCLSPECSEQPSQTHTPPGL---GNQPSPTA 339
PP+Q L P+ PS PPGL N P P A
Sbjct: 984 HPPPLQ-LMPQSQPLPSSPAQPPGLTQSQNLPPPPA 1018
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 35.4 bits (80), Expect = 0.12
Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 17/156 (10%)
Query: 194 EPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDR---GRPNSEEPAPPALRRV-- 248
+P P S G+A L T P + P L A Q +P E+P PPA +
Sbjct: 870 QPFGLPPQASQGQAPL--GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927
Query: 249 FKTEVATVYA--PALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQAPSETALA 306
K T PA A P LS + S + P + + L+ PS A
Sbjct: 928 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPS----A 983
Query: 307 CSPPMQCLSPECSEQPSQTHTPPGL---GNQPSPTA 339
PP+Q L P+ PS PPGL N P P A
Sbjct: 984 HPPPLQ-LMPQSQPLPSSPAQPPGLTQSQNLPPPPA 1018
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 35.0 bits (79), Expect = 0.15
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 227 RAKQDRGR-PNSEEPAPPALRRVFKTEVATVY--------APALSARAPEPGLSDSAAAS 277
R K+ R P+S + A PA F E T++ AP A A EP + S+
Sbjct: 86 RTKEKLARVPHSTQGAGPAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAPSSQPP 145
Query: 278 QWSLCPAD---DERRRATHLNGLQAPSETALACSPPMQCLSPECSEQ------PSQTHTP 328
S CP E RR A S+ S P P C+ Q P + +P
Sbjct: 146 PPSACPQRYVLSEDRREDRRADTSAHSKA--GSSSPEPWARPSCTPQEGGCPRPKERESP 203
Query: 329 PGLGNQP 335
P QP
Sbjct: 204 PPSALQP 210
>gi|14149696 SEC31 homolog B [Homo sapiens]
Length = 1179
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/163 (25%), Positives = 57/163 (34%), Gaps = 15/163 (9%)
Query: 184 VDQPLGVNCTEPCK-SPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSEEPAP 242
V P+G T P SP P++ ST P + LL GR S PAP
Sbjct: 898 VPNPVGFPGTWPLPGSPLPMACPGIMRPGSTSLPETPRLFPLLPLRPLGPGRMVSHTPAP 957
Query: 243 PALRRV-----FKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGL 297
PA V + P P PG DS W PA + L
Sbjct: 958 PASFPVPYLPGDPGAPCSSVLPTTGILTPHPGPQDS-----WKEAPAPRGNLQRNKLPET 1012
Query: 298 QAP----SETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPS 336
P + ++ +P +Q + P S +H PPG+ + S
Sbjct: 1013 FMPPAPITAPVMSLTPELQGILPSQPPVSSVSHAPPGVPGELS 1055
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 34.3 bits (77), Expect = 0.26
Identities = 45/187 (24%), Positives = 63/187 (33%), Gaps = 46/187 (24%)
Query: 191 NCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSEEPAPPALRRVFK 250
N P K PEP+ EAA AK+ + + +P P +
Sbjct: 326 NSPIPAKLPEPVKASEAA-------------------AKKTQPKARLTDPIPTT-----E 361
Query: 251 TEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRAT-----------HLNGLQA 299
T +A P P PG+ + PA R+RAT + GL A
Sbjct: 362 TSIAPRQRPKAGQTQPNPGI--------LPIQPALTPRKRATVQPPPQAAGSSNQPGLLA 413
Query: 300 PSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAAGEECQRIVPHTEVVDLK 359
+PP Q L ++QP PP PS A + Q H + + LK
Sbjct: 414 SVPQPKPQAPPSQPLPQTQAKQP---QAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFLK 470
Query: 360 AQLQMME 366
Q Q +
Sbjct: 471 QQQQQQQ 477
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.9 bits (76), Expect = 0.34
Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 29/173 (16%)
Query: 179 QHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSE 238
Q+ T+ VN + + P++ A Q++T P P A P
Sbjct: 134 QNATTISSRENVNTSSSVATLAPVN--SPAPQDTTAAP---PTPSATTPAPPSSSAPPET 188
Query: 239 EPAPPALRRVFKTEVATVYAPALSARAPE------------PGLSDSAAASQWSLCPADD 286
APP T AT AP S+ PE P S+A + + P
Sbjct: 189 TAAPP-------TPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTP 241
Query: 287 ERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTA 339
L+ P TA+ +P L P + P +T P P+P+A
Sbjct: 242 SATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAP-----PTPSA 289
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.9 bits (76), Expect = 0.34
Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 29/173 (16%)
Query: 179 QHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSE 238
Q+ T+ VN + + P++ A Q++T P P A P
Sbjct: 134 QNATTISSRENVNTSSSVATLAPVN--SPAPQDTTAAP---PTPSATTPAPPSSSAPPET 188
Query: 239 EPAPPALRRVFKTEVATVYAPALSARAPE------------PGLSDSAAASQWSLCPADD 286
APP T AT AP S+ PE P S+A + + P
Sbjct: 189 TAAPP-------TPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTP 241
Query: 287 ERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTA 339
L+ P TA+ +P L P + P +T P P+P+A
Sbjct: 242 SATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAP-----PTPSA 289
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 33.9 bits (76), Expect = 0.34
Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 29/173 (16%)
Query: 179 QHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGRPNSE 238
Q+ T+ VN + + P++ A Q++T P P A P
Sbjct: 134 QNATTISSRENVNTSSSVATLAPVN--SPAPQDTTAAP---PTPSATTPAPPSSSAPPET 188
Query: 239 EPAPPALRRVFKTEVATVYAPALSARAPE------------PGLSDSAAASQWSLCPADD 286
APP T AT AP S+ PE P S+A + + P
Sbjct: 189 TAAPP-------TPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTP 241
Query: 287 ERRRATHLNGLQAPSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTA 339
L+ P TA+ +P L P + P +T P P+P+A
Sbjct: 242 SATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAP-----PTPSA 289
>gi|223468602 t-complex 10-like 2 [Homo sapiens]
Length = 353
Score = 33.5 bits (75), Expect = 0.44
Identities = 39/164 (23%), Positives = 62/164 (37%), Gaps = 22/164 (13%)
Query: 120 LDRKKGNLKSLPAADPFKSQNNGFLTDAKEKNEAGPM---EEARPCGAGRVHKTTALVFH 176
L R++ PAA P + + L + P+ EE P AGR ++ L+
Sbjct: 96 LQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISPLSADEETTPKYAGRKSQSATLLGQ 155
Query: 177 --SNQHMNTVDQPLGVNCTEPCKSPEPLSYGEAALQNSTRPPSEEPDYQLLGRAKQDRGR 234
S+ H+ P+P+S + + PP E+ + GR +QDR
Sbjct: 156 RWSSNHL---------------APPKPMSLKTERINSGKTPPQEDREKSPPGR-RQDRSP 199
Query: 235 PNSEEPAPPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQ 278
+ P P A RR +E + P+ + G ASQ
Sbjct: 200 APTGRPTPGAERREV-SEDGKIMHPSSRSLQNSGGRKSPVQASQ 242
>gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo
sapiens]
Length = 324
Score = 33.5 bits (75), Expect = 0.44
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 236 NSEEPAPPALRRVFKTEVATVYAPALSARAPEPGLSDSAAASQWSLCPADDERRRATHLN 295
NS++P+P + VF V TV+ L AP P ++ AA+ + P D RR
Sbjct: 63 NSQQPSPTTFKSVFV--VVTVHTEKL---APHPQITQRGAAAATAAAPEDSAPRRF---- 113
Query: 296 GLQAPSETALACSPPMQCLSPECSEQPSQT-HTPPGLGNQPSPT 338
AP PP Q L + + T P LG SPT
Sbjct: 114 ---APDPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPT 154
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 33.5 bits (75), Expect = 0.44
Identities = 54/226 (23%), Positives = 79/226 (34%), Gaps = 45/226 (19%)
Query: 194 EPCKSPEPLSYGEAALQNSTRPP-SEEPDYQLLGRAK---QDRG--RPNSEEPAPPALRR 247
+P +PL+ ++ +PP + +P Q LG AK Q G +P+SE+P P AL +
Sbjct: 334 QPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQ 393
Query: 248 ---VFKT--------EVATVYAPALSARAPEPGLSDSAAASQWSLCP------------- 283
V KT + T A +PGL A A + P
Sbjct: 394 PPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQ 453
Query: 284 ADDERRRATHLNGLQAPSETALACSPPMQCLSP------------ECSEQPSQTHTPPGL 331
A + A + PS+ PP Q P S+QP T PP
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPP-- 511
Query: 332 GNQPSPTAVAAGEECQRIVPHTEVVDLKAQLQMMENLISSSQETIK 377
QP P + + P + K Q S+Q++ K
Sbjct: 512 -QQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTK 556
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 33.5 bits (75), Expect = 0.44
Identities = 54/226 (23%), Positives = 79/226 (34%), Gaps = 45/226 (19%)
Query: 194 EPCKSPEPLSYGEAALQNSTRPP-SEEPDYQLLGRAK---QDRG--RPNSEEPAPPALRR 247
+P +PL+ ++ +PP + +P Q LG AK Q G +P+SE+P P AL +
Sbjct: 334 QPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQ 393
Query: 248 ---VFKT--------EVATVYAPALSARAPEPGLSDSAAASQWSLCP------------- 283
V KT + T A +PGL A A + P
Sbjct: 394 PPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQ 453
Query: 284 ADDERRRATHLNGLQAPSETALACSPPMQCLSP------------ECSEQPSQTHTPPGL 331
A + A + PS+ PP Q P S+QP T PP
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPP-- 511
Query: 332 GNQPSPTAVAAGEECQRIVPHTEVVDLKAQLQMMENLISSSQETIK 377
QP P + + P + K Q S+Q++ K
Sbjct: 512 -QQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTK 556
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 33.1 bits (74), Expect = 0.57
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 329 PGLGNQPSPTAVAAGEECQRIVP 351
PGLG P+PT V AG CQ ++P
Sbjct: 407 PGLGRPPAPTHVGAGSLCQALLP 429
>gi|239756966 PREDICTED: similar to arg tyrosine kinase [Homo
sapiens]
Length = 243
Score = 33.1 bits (74), Expect = 0.57
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 23/121 (19%)
Query: 244 ALRRVFKTEVATVY----APALSARAPEPGLSDSAAASQWSLCPADDERRRATHLNGLQA 299
ALR T TV APA +A P P A S++++ PA R TH++ A
Sbjct: 88 ALRNCLLTADLTVKIDPAAPAPAAPTPTP-----APFSRFTVSPAPTSRFSITHVSDSDA 142
Query: 300 PSETALACSPPMQCLSPECSEQPSQTHTPPGLGNQPSPTAVAA-GEECQRIVPHTEVVDL 358
S+ L Q LSPE PSQ P P PT G + ++VP V L
Sbjct: 143 ESKRDL-----RQALSPE----PSQPEVPA----DPGPTVPRPHGAQDLKLVPGVRVKRL 189
Query: 359 K 359
+
Sbjct: 190 E 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,184,573
Number of Sequences: 37866
Number of extensions: 1101559
Number of successful extensions: 3695
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 3620
Number of HSP's gapped (non-prelim): 175
length of query: 479
length of database: 18,247,518
effective HSP length: 106
effective length of query: 373
effective length of database: 14,233,722
effective search space: 5309178306
effective search space used: 5309178306
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.