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Search of human proteins with 89353285
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89353285 death effector domain-containing protein [Homo
sapiens]
(318 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89353287 death effector domain-containing protein [Homo sapiens] 648 0.0
gi|89353285 death effector domain-containing protein [Homo sapiens] 648 0.0
gi|14670394 death effector domain-containing protein [Homo sapiens] 648 0.0
gi|19923050 death effector domain-containing DNA binding protei... 250 1e-66
gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens] 37 0.030
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 35 0.088
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 35 0.088
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 35 0.088
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 33 0.33
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 33 0.33
gi|4502827 cholinergic receptor, nicotinic, alpha 4 subunit prec... 32 0.57
gi|12597625 activating transcription factor 5 [Homo sapiens] 32 0.57
gi|237681196 FEZ family zinc finger 1 isoform 2 [Homo sapiens] 32 0.75
gi|237681194 FEZ family zinc finger 1 isoform 1 [Homo sapiens] 32 0.75
gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 32 0.75
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 32 0.75
gi|122056476 caspase 8 isoform G precursor [Homo sapiens] 32 0.97
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 32 0.97
gi|122056474 caspase 8 isoform C precursor [Homo sapiens] 32 0.97
gi|15718712 caspase 8 isoform E [Homo sapiens] 32 0.97
gi|15718708 caspase 8 isoform C precursor [Homo sapiens] 32 0.97
gi|15718706 caspase 8 isoform B precursor [Homo sapiens] 32 0.97
gi|15718704 caspase 8 isoform A precursor [Homo sapiens] 32 0.97
gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens] 32 0.97
gi|4885363 goosecoid homeobox 2 [Homo sapiens] 32 0.97
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 31 1.3
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 31 1.3
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 31 1.3
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 31 1.3
gi|31377777 NK2 homeobox 8 [Homo sapiens] 31 1.7
>gi|89353287 death effector domain-containing protein [Homo sapiens]
Length = 318
Score = 648 bits (1671), Expect = 0.0
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 1 MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL 60
MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL
Sbjct: 1 MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL 60
Query: 61 IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE 120
IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE
Sbjct: 61 IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE 120
Query: 121 TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR 180
TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR
Sbjct: 121 TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR 180
Query: 181 KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD 240
KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD
Sbjct: 181 KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD 240
Query: 241 LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED 300
LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED
Sbjct: 241 LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED 300
Query: 301 YELGRQKLLRNLMLQALP 318
YELGRQKLLRNLMLQALP
Sbjct: 301 YELGRQKLLRNLMLQALP 318
>gi|89353285 death effector domain-containing protein [Homo sapiens]
Length = 318
Score = 648 bits (1671), Expect = 0.0
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 1 MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL 60
MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL
Sbjct: 1 MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL 60
Query: 61 IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE 120
IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE
Sbjct: 61 IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE 120
Query: 121 TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR 180
TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR
Sbjct: 121 TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR 180
Query: 181 KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD 240
KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD
Sbjct: 181 KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD 240
Query: 241 LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED 300
LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED
Sbjct: 241 LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED 300
Query: 301 YELGRQKLLRNLMLQALP 318
YELGRQKLLRNLMLQALP
Sbjct: 301 YELGRQKLLRNLMLQALP 318
>gi|14670394 death effector domain-containing protein [Homo sapiens]
Length = 318
Score = 648 bits (1671), Expect = 0.0
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 1 MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL 60
MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL
Sbjct: 1 MAGLKRRASQVWPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGL 60
Query: 61 IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE 120
IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE
Sbjct: 61 IRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEE 120
Query: 121 TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR 180
TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR
Sbjct: 121 TSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR 180
Query: 181 KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD 240
KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD
Sbjct: 181 KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSRD 240
Query: 241 LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED 300
LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED
Sbjct: 241 LGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEED 300
Query: 301 YELGRQKLLRNLMLQALP 318
YELGRQKLLRNLMLQALP
Sbjct: 301 YELGRQKLLRNLMLQALP 318
>gi|19923050 death effector domain-containing DNA binding protein 2
[Homo sapiens]
Length = 326
Score = 250 bits (638), Expect = 1e-66
Identities = 139/310 (44%), Positives = 196/310 (63%), Gaps = 21/310 (6%)
Query: 12 WPEEHGEQEHGLYSLHRMFDIVGTHLTHRDVRVLSFLFVDVIDDHERGLIR--NGRDFLL 69
W E+ +G+ SLHRMF++VG LT ++ +L+FL +D GL R +G + LL
Sbjct: 12 WEEDECLDYYGMLSLHRMFEVVGGQLTECELELLAFL-LDEAPGAAGGLARARSGLELLL 70
Query: 70 ALERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEETSIRYVTPR 129
LER+G+CDESN R + QLLR++ RHDLLP++ KRRR V P+ +Y TS
Sbjct: 71 ELERRGQCDESNLRLLGQLLRVLARHDLLPHLARKRRRPVSPE---RYSYGTSSSSKRTE 127
Query: 130 ALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRR--------- 180
+ + + + T P +R +RGR + G++R+RR
Sbjct: 128 GSCRRRRQSSSSANSQQGQWE-----TGSPPTKRQRRSRGRPSGGARRRRRGAPAAPQQQ 182
Query: 181 -KSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNKQDPLERQFERFNQANTILKSR 239
+ P + K TCDIRLRVRAEYC+H AL+ V S + L RQ + F QA +L+SR
Sbjct: 183 SEPARPSSEGKVTCDIRLRVRAEYCEHGPALEQGVASRRPQALARQLDVFGQATAVLRSR 242
Query: 240 DLGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVFITDSLKQAVGHEAIKLLVNVDEE 299
DLGS++CDIKFSEL+YLDAFW DY++G+LL+AL+GVF+T++L++AVG EA++LLV+VDE
Sbjct: 243 DLGSVVCDIKFSELSYLDAFWGDYLSGALLQALRGVFLTEALREAVGREAVRLLVSVDEA 302
Query: 300 DYELGRQKLL 309
DYE GR++LL
Sbjct: 303 DYEAGRRRLL 312
>gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens]
Length = 408
Score = 36.6 bits (83), Expect = 0.030
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 134 PEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPAR 168
PE PP PS+++ P C P G C +RPAR
Sbjct: 247 PEESPPAPSRSLAPAPVGTCAPPEGVPACGRRPAR 281
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 35.0 bits (79), Expect = 0.088
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 128 PRALSDPEPRPPQPSKTVPPHYPVVCCPTSG 158
P AL P P+PP+P+ T PP P + P G
Sbjct: 2615 PNALLQPPPQPPEPTATAPPKPPELPAPGEG 2645
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 35.0 bits (79), Expect = 0.088
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 128 PRALSDPEPRPPQPSKTVPPHYPVVCCPTSG 158
P AL P P+PP+P+ T PP P + P G
Sbjct: 2531 PNALLQPPPQPPEPTATAPPKPPELPAPGEG 2561
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 35.0 bits (79), Expect = 0.088
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 128 PRALSDPEPRPPQPSKTVPPHYPVVCCPTSG 158
P AL P P+PP+P+ T PP P + P G
Sbjct: 2531 PNALLQPPPQPPEPTATAPPKPPELPAPGEG 2561
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 33.1 bits (74), Expect = 0.33
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 108 AVCPDLVDKYLEETSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPA 167
AV PDL+ ++ + V P+ L P P PPQP PP P S P + + P
Sbjct: 227 AVTPDLI---VQTPVMTVVPPQPLQTPPPVPPQPQ---PPPAPAPQPVQSHPPIIAATPQ 280
Query: 168 RGRATLGSQRK 178
+ G +RK
Sbjct: 281 PVKTKKGVKRK 291
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 33.1 bits (74), Expect = 0.33
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 108 AVCPDLVDKYLEETSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPA 167
AV PDL+ ++ + V P+ L P P PPQP PP P S P + + P
Sbjct: 227 AVTPDLI---VQTPVMTVVPPQPLQTPPPVPPQPQ---PPPAPAPQPVQSHPPIIAATPQ 280
Query: 168 RGRATLGSQRK 178
+ G +RK
Sbjct: 281 PVKTKKGVKRK 291
>gi|4502827 cholinergic receptor, nicotinic, alpha 4 subunit
precursor [Homo sapiens]
Length = 627
Score = 32.3 bits (72), Expect = 0.57
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 96 DLLPYVTLKRRRAVCPDLVDKYLEETSIRYVTPRALSDPEPRPPQPSKT--VPPHYPVVC 153
D++P + L +R +V D + +E PR +PE PP S T + P P C
Sbjct: 350 DIVPRLLLMKRPSVVKDNCRRLIESMHKMASAPRFWPEPEGEPPATSGTQSLHPPSPSFC 409
Query: 154 CPTSGP 159
P P
Sbjct: 410 VPLDVP 415
>gi|12597625 activating transcription factor 5 [Homo sapiens]
Length = 282
Score = 32.3 bits (72), Expect = 0.57
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 128 PRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRRKSVTPDP 187
P P P PPQPS+ P +P T G + KR A L ++++R
Sbjct: 181 PPPQQPPPPSPPQPSRLAPYPHPAT---TRGDRKQKKRDQNKSAALRYRQRKRAEGEALE 237
Query: 188 KEKQTCDIR---LRVRAEYCQHE 207
E Q + R L+ RAE + E
Sbjct: 238 GECQGLEARNRELKERAESVERE 260
>gi|237681196 FEZ family zinc finger 1 isoform 2 [Homo sapiens]
Length = 425
Score = 32.0 bits (71), Expect = 0.75
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 56 HERGLIRNGRDFLLALERQGRCDESN--FRQVLQL-LRIITRHDLLPYVTLKRRRAVCPD 112
H++G +N + + E+Q +C+ N F QV L + T +D P+ + C +
Sbjct: 304 HQKGNYKNHK-LTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKKPFTCPTCGKGFCRN 362
Query: 113 LVDKY----LEETSIRYV-TPRALSDPEPRPP---QPSKTVPPHYPVVCCPTSGP 159
K L ++S+ TP EP PP QP T+PP P + PT GP
Sbjct: 363 FDLKKHVRKLHDSSLGLARTPAGEPGTEPPPPLPQQPPMTLPPLQPPL--PTPGP 415
>gi|237681194 FEZ family zinc finger 1 isoform 1 [Homo sapiens]
Length = 475
Score = 32.0 bits (71), Expect = 0.75
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 56 HERGLIRNGRDFLLALERQGRCDESN--FRQVLQL-LRIITRHDLLPYVTLKRRRAVCPD 112
H++G +N + + E+Q +C+ N F QV L + T +D P+ + C +
Sbjct: 354 HQKGNYKNHK-LTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKKPFTCPTCGKGFCRN 412
Query: 113 LVDKY----LEETSIRYV-TPRALSDPEPRPP---QPSKTVPPHYPVVCCPTSGP 159
K L ++S+ TP EP PP QP T+PP P + PT GP
Sbjct: 413 FDLKKHVRKLHDSSLGLARTPAGEPGTEPPPPLPQQPPMTLPPLQPPL--PTPGP 465
>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
Length = 474
Score = 32.0 bits (71), Expect = 0.75
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 71 LERQGRCDESNFRQVLQLLRIITRHDLLPYVTLKRRRAVCPDLVDKYLEETSIRYVTPRA 130
LE + E N R +L R + R + L + ++ D ++Y E S + + PR
Sbjct: 291 LEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMD-DERYFNEMSAQGLRPRT 349
Query: 131 LSDPEPRPPQPSKTVP 146
+S P P P PS + P
Sbjct: 350 VSSPIPYTPSPSSSRP 365
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.0 bits (71), Expect = 0.75
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 4/145 (2%)
Query: 58 RGLIRNGRDFLLALERQGRCDESNFRQ-VLQLLRIITRHDLLPYVTLKRRRAVCPDLVDK 116
R L+R GR +R+GR S+ R+ + + +R + P + R + +
Sbjct: 705 RSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSS 764
Query: 117 YLEETSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQ 176
+ R R+LS P P Q S+T P +S P+ S+ P R + S
Sbjct: 765 PRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSR---SGSSQPKAKSRTPPRRSRSSSSP 821
Query: 177 RKRRKSVTPDPKEKQTCDIRLRVRA 201
++KS TP + + +V++
Sbjct: 822 PPKQKSKTPSRQSHSSSSPHPKVKS 846
>gi|122056476 caspase 8 isoform G precursor [Homo sapiens]
Length = 538
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 69 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 128
Query: 93 TRHDLL 98
R DLL
Sbjct: 129 NRLDLL 134
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 31.6 bits (70), Expect = 0.97
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 134 PEPRPPQPSKTVPPHYPVVCCPTSGPQMCSKRPARGRATLGSQRKRRKSVTPDPKEKQ 191
P+ P +P K PP P SGP+ ++ R ++ ++K ++ P P KQ
Sbjct: 1320 PKTTPSEPKKKQPPP------PESGPEQSKQKKVAPRPSIPVKQKPKEKEKPPPVNKQ 1371
>gi|122056474 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 10 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 69
Query: 93 TRHDLL 98
R DLL
Sbjct: 70 NRLDLL 75
>gi|15718712 caspase 8 isoform E [Homo sapiens]
Length = 235
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 10 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 69
Query: 93 TRHDLL 98
R DLL
Sbjct: 70 NRLDLL 75
>gi|15718708 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 10 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 69
Query: 93 TRHDLL 98
R DLL
Sbjct: 70 NRLDLL 75
>gi|15718706 caspase 8 isoform B precursor [Homo sapiens]
Length = 479
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 10 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 69
Query: 93 TRHDLL 98
R DLL
Sbjct: 70 NRLDLL 75
>gi|15718704 caspase 8 isoform A precursor [Homo sapiens]
Length = 496
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 33 VGTHLTHRDVRVLSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRII 92
+G L D+ L FL +D I ++ I++ L+ + +ESN + +LL I
Sbjct: 10 IGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRI 69
Query: 93 TRHDLL 98
R DLL
Sbjct: 70 NRLDLL 75
>gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens]
Length = 707
Score = 31.6 bits (70), Expect = 0.97
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 134 PEPRPPQPSKTVP-PHYPVVCCPTSGPQM-CSKRPARG 169
PEP P P+ T P P P CPT P + S+RP G
Sbjct: 447 PEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTAG 484
>gi|4885363 goosecoid homeobox 2 [Homo sapiens]
Length = 205
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 110 CPDLVDKYLEETSIRYVTPRALSDPEPR----PPQPSKT-VPPHYPVVCCPTSGPQMCSK 164
CP ++ L R + RA P+P P +P + P P CC GP+
Sbjct: 18 CPFSIEHILSSLPERSLPARAACPPQPAGRQSPAKPEEPGAPEAAPCACCCCCGPRAAPC 77
Query: 165 RPARGRATLGSQ 176
P A LG++
Sbjct: 78 GPPEAAAGLGAR 89
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 31.2 bits (69), Expect = 1.3
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 104 KRRRAVCPDLVDKYLEETSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVC--------CP 155
KRRR + P L + P+ L P P PP P C
Sbjct: 27 KRRRFLSPQQPPLLLP-----LLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCF 81
Query: 156 TSGPQMCSKRPARGRATLGSQRKRRK 181
+ GP + KR ARG+ G ++KRR+
Sbjct: 82 SPGPPLEVKRLARGKRRAGGRQKRRR 107
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 31.2 bits (69), Expect = 1.3
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 13/86 (15%)
Query: 104 KRRRAVCPDLVDKYLEETSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVC--------CP 155
KRRR + P L + P+ L P P PP P C
Sbjct: 27 KRRRFLSPQQPPLLLP-----LLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAASSSCF 81
Query: 156 TSGPQMCSKRPARGRATLGSQRKRRK 181
+ GP + KR ARG+ G ++KRR+
Sbjct: 82 SPGPPLEVKRLARGKRRAGGRQKRRR 107
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 31.2 bits (69), Expect = 1.3
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 128 PRALSDPEPRPPQPSKTVPPHYPVVC----CPTSGPQMCSKRPARGRATLGSQRKRRKSV 183
P P+P+PP S T PP C CP S P S+ + Q+ +
Sbjct: 991 PPCCHPPDPKPPASSPTPPPRPSAPCTLNVCPASSPGPGSRVRSAEEKNGEGQQSTADII 1050
Query: 184 TPDP 187
T +P
Sbjct: 1051 TSEP 1054
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 11/63 (17%)
Query: 134 PEPRPPQPSKTVPP-----------HYPVVCCPTSGPQMCSKRPARGRATLGSQRKRRKS 182
P PRPP P PP H PV+ + P ++R RA LGSQ K +
Sbjct: 1376 PPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPA 1435
Query: 183 VTP 185
P
Sbjct: 1436 SPP 1438
>gi|31377777 NK2 homeobox 8 [Homo sapiens]
Length = 239
Score = 30.8 bits (68), Expect = 1.7
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 133 DPEPRPPQPSKTVP------PHYPVV---CCPTSGPQMCSKRPARGRATLGSQRKRRKSV 183
+PEPR PQP HYP TS P S+RP+ A+ GS ++RK
Sbjct: 29 EPEPRAPQPDPCAAWLDSERGHYPSSDESSLETSPPDS-SQRPSARPASPGSDAEKRKKR 87
Query: 184 TPDPKEKQTCDIRLRVRAE 202
+ QT ++ R R +
Sbjct: 88 RVLFSKAQTLELERRFRQQ 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,916,494
Number of Sequences: 37866
Number of extensions: 639768
Number of successful extensions: 3428
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 3311
Number of HSP's gapped (non-prelim): 151
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.