Guide to the Human Genome
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Name: ASB6 Sequence: fasta or formatted (421aa) NCBI GI: 8923516
Description:

ankyrin repeat and SOCS box-containing 6 isoform 1

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [197aa] ankyrin repeat and SOCS box-containing 6 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         33           2
 C cysteine            2.4         10           1
 D aspartate           6.2         26           2
 E glutamate           7.6         32           2
 F phenylalanine       3.8         16           1
 G glycine             5.5         23           2
 H histidine           5.2         22           2
 I isoleucine          4.5         19           2
 K lysine              3.8         16           1
 L leucine            15.7         66           3
 M methionine          1.2          5           1
 N asparagine          2.9         12           1
 P proline             5.5         23           3
 Q glutamine           3.3         14           1
 R arginine            5.7         24           2
 S serine              6.7         28           2
 T threonine           3.8         16           2
 V valine              5.7         24           1
 W tryptophan          0.7          3           1
 Y tyrosine            2.1          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing 6 isoform 1 [H... 
ASB6                  0.293   ankyrin repeat and SOCS box-containing 6 isoform 2 [...
ANKRD28               0.065   ankyrin repeat domain 28 
ANKRD52               0.053   ankyrin repeat domain 52 
ASB10                 0.053   ankyrin repeat and SOCS box-containing 10 isoform 3...
ASB10                 0.053   ankyrin repeat and SOCS box-containing 10 isoform 2...
ASB10                 0.053   ankyrin repeat and SOCS box-containing 10 isoform 1...
ANKHD1                0.052   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.052   ANKHD1-EIF4EBP3 protein 
KIDINS220             0.051   kinase D-interacting substrate of 220 kDa 
ANKRD2                0.051   ankyrin repeat domain 2 isoform a 
ANKRD50               0.050   ankyrin repeat domain 50 
ANKRD44               0.050   ankyrin repeat domain 44 
TNKS                  0.050   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD17               0.048   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.048   ankyrin repeat domain protein 17 isoform b 
ASB16                 0.047   ankyrin repeat and SOCS box-containing protein 16 [H...
ANKRD1                0.046   cardiac ankyrin repeat protein 
UACA                  0.045   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.045   uveal autoantigen with coiled-coil domains and ankyr...
ANK1                  0.045   ankyrin 1 isoform 9 
ANK1                  0.045   ankyrin 1 isoform 1 
ANK1                  0.045   ankyrin 1 isoform 3 
ANK1                  0.045   ankyrin 1 isoform 2 
ANK1                  0.045   ankyrin 1 isoform 4 
RNASEL                0.045   ribonuclease L 
DAPK1                 0.045   death-associated protein kinase 1 
ANK2                  0.045   ankyrin 2 isoform 3 
ANK2                  0.045   ankyrin 2 isoform 2 
ANK2                  0.045   ankyrin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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