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Search of human proteins with 8923477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8923477 transmembrane protein 160 [Homo sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8923477 transmembrane protein 160 [Homo sapiens] 387 e-108
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 33 0.19
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 33 0.19
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 33 0.19
gi|190343021 Sec24-related protein D [Homo sapiens] 33 0.19
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 33 0.19
gi|239753799 PREDICTED: hypothetical protein XP_002345781 [Homo ... 32 0.42
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 32 0.42
gi|239748356 PREDICTED: hypothetical protein XP_002346638 [Homo ... 32 0.42
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 32 0.42
gi|239742256 PREDICTED: hypothetical protein XP_002342462 [Homo ... 32 0.42
gi|16579828 zinc finger protein 91 [Homo sapiens] 32 0.42
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 31 0.55
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 31 0.55
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 31 0.55
gi|92859618 sphingomyelin phosphodiesterase 2, neutral [Homo sap... 30 1.6
gi|71274178 developing brain homeobox 1 [Homo sapiens] 30 1.6
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 29 2.1
gi|224496106 small fragment nuclease [Homo sapiens] 29 2.1
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 29 2.1
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 29 2.7
gi|169202970 PREDICTED: hypothetical protein [Homo sapiens] 29 2.7
gi|169203510 PREDICTED: hypothetical protein [Homo sapiens] 29 2.7
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 29 2.7
gi|169202296 PREDICTED: hypothetical protein [Homo sapiens] 29 2.7
gi|156415990 Y box binding protein 2 [Homo sapiens] 29 2.7
gi|26667257 eyes absent 4 isoform d [Homo sapiens] 29 2.7
gi|98991763 eyes absent 4 isoform b [Homo sapiens] 29 2.7
gi|98991760 eyes absent 4 isoform a [Homo sapiens] 29 2.7
gi|189571629 membrane bound O-acyltransferase domain containing ... 29 2.7
>gi|8923477 transmembrane protein 160 [Homo sapiens]
Length = 188
Score = 387 bits (994), Expect = e-108
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MGGGWWWARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDRADA 60
MGGGWWWARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDRADA
Sbjct: 1 MGGGWWWARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDRADA 60
Query: 61 WLLRKAHETAFLSWFRNGLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVG 120
WLLRKAHETAFLSWFRNGLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVG
Sbjct: 61 WLLRKAHETAFLSWFRNGLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVG 120
Query: 121 LAALRGPMQLTLGGAAVGAGAVLAASLLWACAVGLYMGQLELDVELVPEDDGTASAEGPD 180
LAALRGPMQLTLGGAAVGAGAVLAASLLWACAVGLYMGQLELDVELVPEDDGTASAEGPD
Sbjct: 121 LAALRGPMQLTLGGAAVGAGAVLAASLLWACAVGLYMGQLELDVELVPEDDGTASAEGPD 180
Query: 181 EAGRPPPE 188
EAGRPPPE
Sbjct: 181 EAGRPPPE 188
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 32.7 bits (73), Expect = 0.19
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 19 RRSLLPPQRPRSGGARGSFAPGHGPRAGASPP---PVSEL-DRADAW 61
RR PP+RP+ S P P A A PP P S+L DR +W
Sbjct: 103 RRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSW 149
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 32.7 bits (73), Expect = 0.19
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 19 RRSLLPPQRPRSGGARGSFAPGHGPRAGASPP---PVSEL-DRADAW 61
RR PP+RP+ S P P A A PP P S+L DR +W
Sbjct: 103 RRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSW 149
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 32.7 bits (73), Expect = 0.19
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 19 RRSLLPPQRPRSGGARGSFAPGHGPRAGASPP---PVSEL-DRADAW 61
RR PP+RP+ S P P A A PP P S+L DR +W
Sbjct: 103 RRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSW 149
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 32.7 bits (73), Expect = 0.19
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 20 RSLLPPQRPRSG----GARGSFAPGHGPRAGASPPPVSELDRADA 60
R +LPP P G G G+ A GH P+ PPPV+ + + A
Sbjct: 54 RGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHA 98
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 32.7 bits (73), Expect = 0.19
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 9 RAARLARLRFRRSLLPPQRPR-------SGGARGSFAPGHGPRAGASPPPVSELDRADAW 61
R R R R R P +RPR G R AP G A A PPP + + + +
Sbjct: 2365 RTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPPTHTVQHEGF 2424
Query: 62 LLRK 65
LLRK
Sbjct: 2425 LLRK 2428
>gi|239753799 PREDICTED: hypothetical protein XP_002345781 [Homo
sapiens]
Length = 143
Score = 31.6 bits (70), Expect = 0.42
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 13 LARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDR 57
+ RLR L P +R + G GSF GHG R PP SE R
Sbjct: 2 IKRLRKTEMLRPKRRGATEGWGGSFR-GHGDRENGRPPEASERPR 45
>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
Length = 692
Score = 31.6 bits (70), Expect = 0.42
Identities = 33/126 (26%), Positives = 41/126 (32%), Gaps = 21/126 (16%)
Query: 17 RFRRSLLPPQRPRSGGARGSFAPGHGPR-AGASPPPVSELDRADAWLLRKAHETAFLSWF 75
R + +P QRP + A S A + GA P + DR L R+ +
Sbjct: 473 RLTAARVPLQRPAAAAASSSAAAAAASKLGGAGPGSAEKADRHRRLLERRGQASGNPDTL 532
Query: 76 RNGLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVGLAALRGPMQLTLGGA 135
R + MQ G A Y GLAALR P G A
Sbjct: 533 RQTRPKQPAPLRRAMQG--------------------GPAGYRAGLAALRTPPPAPAGNA 572
Query: 136 AVGAGA 141
G GA
Sbjct: 573 GTGTGA 578
>gi|239748356 PREDICTED: hypothetical protein XP_002346638 [Homo
sapiens]
Length = 118
Score = 31.6 bits (70), Expect = 0.42
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 13 LARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDR 57
+ RLR L P +R + G GSF GHG R PP SE R
Sbjct: 2 IKRLRKTEMLRPKRRGATEGWGGSFR-GHGDRENGRPPEASERPR 45
>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
sapiens]
Length = 692
Score = 31.6 bits (70), Expect = 0.42
Identities = 33/126 (26%), Positives = 41/126 (32%), Gaps = 21/126 (16%)
Query: 17 RFRRSLLPPQRPRSGGARGSFAPGHGPR-AGASPPPVSELDRADAWLLRKAHETAFLSWF 75
R + +P QRP + A S A + GA P + DR L R+ +
Sbjct: 473 RLTAARVPLQRPAAAAASSSAAAAAASKLGGAGPGSAEKADRHRRLLERRGQASGNPDTL 532
Query: 76 RNGLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVGLAALRGPMQLTLGGA 135
R + MQ G A Y GLAALR P G A
Sbjct: 533 RQTRPKQPAPLRRAMQG--------------------GPAGYRAGLAALRTPPPAPAGNA 572
Query: 136 AVGAGA 141
G GA
Sbjct: 573 GTGTGA 578
>gi|239742256 PREDICTED: hypothetical protein XP_002342462 [Homo
sapiens]
Length = 143
Score = 31.6 bits (70), Expect = 0.42
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 13 LARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDR 57
+ RLR L P +R + G GSF GHG R PP SE R
Sbjct: 2 IKRLRKTEMLRPKRRGATEGWGGSFR-GHGDRENGRPPEASERPR 45
>gi|16579828 zinc finger protein 91 [Homo sapiens]
Length = 570
Score = 31.6 bits (70), Expect = 0.42
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 8 ARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPV 52
A AA A R R++ P +R S AR PG P+A SP PV
Sbjct: 61 AAAAAAAVSRRRKAEYPRRRRSSPSARPPDVPGQQPQAAKSPSPV 105
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 31.2 bits (69), Expect = 0.55
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 9 RAARLARLRFRRSLLPPQRPR--SGGARGSFAPGHGPRAGASPPPVSELDRADAWLLRKA 66
RAA R +PP RP SGG R A G GPR PP A A LR
Sbjct: 196 RAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLRSV 255
Query: 67 H 67
H
Sbjct: 256 H 256
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 31.2 bits (69), Expect = 0.55
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 9 RAARLARLRFRRSLLPPQRPR--SGGARGSFAPGHGPRAGASPPPVSELDRADAWLLRKA 66
RAA R +PP RP SGG R A G GPR PP A A LR
Sbjct: 125 RAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLRSV 184
Query: 67 H 67
H
Sbjct: 185 H 185
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 31.2 bits (69), Expect = 0.55
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 20 RSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDRADA 60
R LPP +P G F+P P +SPPP++ L RA++
Sbjct: 468 RPKLPPGKPGVGDVSRPFSP---PIHSSSPPPIAPLARAES 505
>gi|92859618 sphingomyelin phosphodiesterase 2, neutral [Homo
sapiens]
Length = 423
Score = 29.6 bits (65), Expect = 1.6
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 115 ASYAVGLAALRGPMQLTLGGAAVGAGAVLAASLLWACAVGLYM 157
ASY +GL L + L A G GA AA LLW +VGL +
Sbjct: 327 ASYVIGLGLLLLALLCVL---AAGGGAGEAAILLWTPSVGLVL 366
>gi|71274178 developing brain homeobox 1 [Homo sapiens]
Length = 382
Score = 29.6 bits (65), Expect = 1.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 10/52 (19%)
Query: 32 GARGSFAPGHGPRAGASPPPVSELDRADAWLLRKAHETAFLSWFRNGLLASG 83
GA +PG G R G SPP A ET FL + N +L+SG
Sbjct: 78 GASDLGSPGPGSRRGGSPPTA----------FSPASETTFLKFGVNAILSSG 119
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 29.3 bits (64), Expect = 2.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 25 PQRPRSG-GARGSFAPGHGPRAGASPPPVSE 54
P+RPR G RG+ G RAG P P+SE
Sbjct: 65 PRRPRDAVGQRGAQGAGRRRRAGGPPRPMSE 95
>gi|224496106 small fragment nuclease [Homo sapiens]
Length = 237
Score = 29.3 bits (64), Expect = 2.1
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 133 GGAAVGAGAVLAASLLWACAVGLYMGQLELDVE-------LVPEDDGTASAEGPDEAGRP 185
GGAA+ AG +A ++W V L M L+++ + L+ + D AEGP+ +
Sbjct: 29 GGAAMAAGESMAQRMVW---VDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQ 85
Query: 186 PPE 188
P E
Sbjct: 86 PDE 88
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 29.3 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 6/34 (17%)
Query: 24 PPQRPRSGGARGSFAPGHGPRA------GASPPP 51
PP PRS G +P H PRA G +PPP
Sbjct: 505 PPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPP 538
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 28.9 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 25 PQRPRSGGARGSFAPGHGPRAGASPPPVSELDRADA 60
P P + APG GP A +S PP S + A
Sbjct: 1414 PAAPEDAATSAAAAPGEGPAAPSSAPPPSNSSSSSA 1449
>gi|169202970 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 28.9 bits (63), Expect = 2.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 WARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVS 53
WA R RL S PP P +R P PRAG SPPP +
Sbjct: 22 WAAVIRSVRLWPDISAAPPP-PHPLSSRRGLGP---PRAGGSPPPTA 64
>gi|169203510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 28.9 bits (63), Expect = 2.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 WARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVS 53
WA R RL S PP P +R P PRAG SPPP +
Sbjct: 22 WAAVIRSVRLWPDISAAPPP-PHPLSSRRGLGP---PRAGGSPPPTA 64
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 28.9 bits (63), Expect = 2.7
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 16/68 (23%)
Query: 2 GGGWWWARAARLARLRFRRSL---------------LPPQRPRSGGARGSFAPGHGPRAG 46
G G W R AR R R ++L PP R G RG G GP AG
Sbjct: 6 GSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGRGP-AG 64
Query: 47 ASPPPVSE 54
+P +E
Sbjct: 65 RAPAASAE 72
>gi|169202296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 28.9 bits (63), Expect = 2.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 7 WARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVS 53
WA R RL S PP P +R P PRAG SPPP +
Sbjct: 22 WAAVIRSVRLWPDISAAPPP-PHPLSSRRGLGP---PRAGGSPPPTA 64
>gi|156415990 Y box binding protein 2 [Homo sapiens]
Length = 364
Score = 28.9 bits (63), Expect = 2.7
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 15 RLRFRRSLLPP--QRPRSGGARGSFAPGHGPRAGASPPP 51
R R+RR P Q+P + G G P GP G+ P P
Sbjct: 278 RPRYRRPFRPRPRQQPTTEGGDGETKPSQGPADGSRPEP 316
>gi|26667257 eyes absent 4 isoform d [Homo sapiens]
Length = 639
Score = 28.9 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 29 RSGGARGSFAPGHGPRAGASPPPVSELDRADAW 61
R+ + GS + G G + SPPP S+L+R W
Sbjct: 342 RTCRSSGSKSRGRGRKNNPSPPPDSDLERVFVW 374
>gi|98991763 eyes absent 4 isoform b [Homo sapiens]
Length = 616
Score = 28.9 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 29 RSGGARGSFAPGHGPRAGASPPPVSELDRADAW 61
R+ + GS + G G + SPPP S+L+R W
Sbjct: 319 RTCRSSGSKSRGRGRKNNPSPPPDSDLERVFVW 351
>gi|98991760 eyes absent 4 isoform a [Homo sapiens]
Length = 639
Score = 28.9 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 29 RSGGARGSFAPGHGPRAGASPPPVSELDRADAW 61
R+ + GS + G G + SPPP S+L+R W
Sbjct: 342 RTCRSSGSKSRGRGRKNNPSPPPDSDLERVFVW 374
>gi|189571629 membrane bound O-acyltransferase domain containing 4
[Homo sapiens]
Length = 435
Score = 28.9 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 38 APGHGPRAGASPPPVSELDRADAWLLRKAHETAFLS 73
A G GP G SP + AD W L + H + S
Sbjct: 268 AAGFGPELGQSPGEEGYVPDADIWTLERTHRISVFS 303
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,689,632
Number of Sequences: 37866
Number of extensions: 407432
Number of successful extensions: 2360
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2318
Number of HSP's gapped (non-prelim): 82
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.