Guide to the Human Genome
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Name: DYDC2 Sequence: fasta or formatted (177aa) NCBI GI: 14150195
Description:

DPY30 domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         11           1
 C cysteine            2.3          4           1
 D aspartate           2.3          4           1
 E glutamate          14.1         25           2
 F phenylalanine       3.4          6           1
 G glycine             2.8          5           1
 H histidine           3.4          6           1
 I isoleucine          4.0          7           1
 K lysine             10.2         18           2
 L leucine             7.3         13           1
 M methionine          4.5          8           1
 N asparagine          4.0          7           1
 P proline             6.8         12           2
 Q glutamine           7.9         14           2
 R arginine            2.3          4           1
 S serine              6.2         11           2
 T threonine           5.1          9           1
 V valine              2.8          5           1
 W tryptophan          0.6          1           1
 Y tyrosine            4.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DPY30 domain containing 2 
DYDC1                 0.171   DPY30 domain containing 1 
CCDC88A               0.041   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.041   coiled-coil domain containing 88A isoform 1 
BAT2D1                0.035   HBxAg transactivated protein 2 
SPANXN2               0.029   SPANX-N2 protein 
PRKCSH                0.026   protein kinase C substrate 80K-H isoform 2 
PRKCSH                0.026   protein kinase C substrate 80K-H isoform 1 
ARHGAP6               0.026   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.026   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.026   Rho GTPase activating protein 6 isoform 1 
KTN1                  0.026   kinectin 1 isoform b 
KTN1                  0.026   kinectin 1 isoform a 
KTN1                  0.026   kinectin 1 isoform c 
KTN1                  0.026   kinectin 1 isoform a 
WDR87                 0.024   NYD-SP11 protein 
LEKR1                 0.024   leucine, glutamate and lysine rich 1 
CNKSR2                0.024   connector enhancer of kinase suppressor of Ras 2 [Ho...
TAOK1                 0.024   TAO kinase 1 
AK7                   0.024   adenylate kinase 7 
GOLGB1                0.024   golgi autoantigen, golgin subfamily b, macrogolgin ...
ARID4A                0.021   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.021   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.021   retinoblastoma-binding protein 1 isoform I 
DST                   0.021   dystonin isoform 4 
DST                   0.021   dystonin isoform 3 
DST                   0.021   dystonin isoform 2 
ANKRD12               0.021   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.021   ankyrin repeat domain 12 isoform 1 
DST                   0.021   dystonin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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