WDR54 3733

Name: WDR54	Sequence: fasta or formatted (334aa)		NCBI GI: 14149771
Description: WD repeat domain 54		Referenced in: WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 35 3 C cysteine 3.3 11 1 D aspartate 3.9 13 2 E glutamate 4.8 16 2 F phenylalanine 3.6 12 1 G glycine 9.6 32 1 H histidine 3.9 13 1 I isoleucine 5.1 17 2 K lysine 1.2 4 1 L leucine 9.9 33 2 M methionine 1.5 5 1 N asparagine 3.0 10 2 P proline 5.4 18 2 Q glutamine 4.5 15 1 R arginine 4.8 16 2 S serine 7.5 25 2 T threonine 4.5 15 2 V valine 8.7 29 2 W tryptophan 2.1 7 1 Y tyrosine 2.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 54 THOC6 0.030 WD repeat domain 58 isoform 2 THOC6 0.030 WD repeat domain 58 isoform 1 WDR18 0.023 WD repeat domain 18 WDFY3 0.021 WD repeat and FYVE domain containing 3 isoform 1 [Ho... CDC20 0.021 cell division cycle 20 WDR3 0.021 WD repeat-containing protein 3 RBBP5 0.020 retinoblastoma binding protein 5 WDR48 0.018 WD repeat domain 48 WDR87 0.017 NYD-SP11 protein WDR38 0.017 WD repeat domain 38 FBXW8 0.017 F-box and WD repeat domain containing 8 isoform 2 [H... FBXW8 0.017 F-box and WD repeat domain containing 8 isoform 1 [H... KATNB1 0.015 katanin p80 subunit B 1 RRP9 0.015 RNA, U3 small nucleolar interacting protein 2 PNKD 0.015 myofibrillogenesis regulator 1 isoform 2 PNKD 0.015 myofibrillogenesis regulator 1 isoform 1 WDR90 0.015 WD repeat domain 90 BRWD2 0.015 bromodomain and WD repeat domain containing 2 WDR5B 0.015 WD repeat domain 5B EIF3I 0.014 eukaryotic translation initiation factor 3, subunit 2... SCAP 0.012 SREBF chaperone protein WSB1 0.012 WD repeat and SOCS box-containing 1 isoform 1 SEC31B 0.012 SEC31 homolog B GNB2L1 0.012 guanine nucleotide binding protein (G protein), beta ... WDR5 0.012 WD repeat domain 5 WDR5 0.012 WD repeat domain 5 CDC20B 0.012 CDC20 cell division cycle 20 homolog B isoform 1 [Ho... CDC20B 0.012 CDC20 cell division cycle 20 homolog B isoform 2 [H... WDR65 0.012 WD repeat domain 65 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.