BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|14149657 NULP1 [Homo sapiens] (676 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|14149657 NULP1 [Homo sapiens] 1369 0.0 gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 40 0.005 gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 40 0.005 gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 38 0.035 gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 38 0.035 gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 35 0.30 gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 35 0.30 gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 34 0.39 gi|50962882 G patch domain containing 8 [Homo sapiens] 34 0.39 gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 34 0.39 gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 33 0.86 gi|151301228 formin binding protein 3 [Homo sapiens] 33 0.86 gi|19923475 tRNA methyltransferase 6 [Homo sapiens] 33 0.86 gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 33 0.86 gi|56090620 NFKB activating protein-like [Homo sapiens] 33 0.86 gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo... 33 1.1 gi|110611228 utrophin [Homo sapiens] 33 1.1 gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 33 1.1 gi|84875539 phosphoribosyl pyrophosphate synthetase 2 isoform 1 ... 33 1.1 gi|4506129 phosphoribosyl pyrophosphate synthetase 2 isoform 2 [... 33 1.1 gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 32 1.5 gi|169163644 PREDICTED: similar to CG12975 [Homo sapiens] 32 1.9 gi|88955003 PREDICTED: similar to CG12975 [Homo sapiens] 32 1.9 gi|41190515 PREDICTED: similar to CG12975 [Homo sapiens] 32 1.9 gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens] 32 1.9 gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens] 32 1.9 gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens] 32 1.9 gi|4506567 RNA (guanine-7-) methyltransferase [Homo sapiens] 32 1.9 gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens] 32 1.9 gi|33589824 cell growth regulator with EF-hand domain 1 [Homo sa... 32 1.9 >gi|14149657 NULP1 [Homo sapiens] Length = 676 Score = 1369 bits (3543), Expect = 0.0 Identities = 676/676 (100%), Positives = 676/676 (100%) Query: 1 MSRRALRRLRGEQRGQEPLGPGALHFDLRDDDDAEEEGPKRELGVRRPGGAGKEGVRVNN 60 MSRRALRRLRGEQRGQEPLGPGALHFDLRDDDDAEEEGPKRELGVRRPGGAGKEGVRVNN Sbjct: 1 MSRRALRRLRGEQRGQEPLGPGALHFDLRDDDDAEEEGPKRELGVRRPGGAGKEGVRVNN 60 Query: 61 RFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSH 120 RFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSH Sbjct: 61 RFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSH 120 Query: 121 ASGKLRKKKKKQKNKKSSTGEASENGLEDIDRILERIEDSTGLNRPGPAPLSSRKHVLYV 180 ASGKLRKKKKKQKNKKSSTGEASENGLEDIDRILERIEDSTGLNRPGPAPLSSRKHVLYV Sbjct: 121 ASGKLRKKKKKQKNKKSSTGEASENGLEDIDRILERIEDSTGLNRPGPAPLSSRKHVLYV 180 Query: 181 EHRHLNPDTELKRYFGARAILGEQRPRQRQRVYPKCTWLTTPKSTWPRYSKPGLSMRLLE 240 EHRHLNPDTELKRYFGARAILGEQRPRQRQRVYPKCTWLTTPKSTWPRYSKPGLSMRLLE Sbjct: 181 EHRHLNPDTELKRYFGARAILGEQRPRQRQRVYPKCTWLTTPKSTWPRYSKPGLSMRLLE 240 Query: 241 SKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQE 300 SKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQE Sbjct: 241 SKKGLSFFAFEHSEEYQQAQHKFLVAVESMEPNNIVVLLQTSPYHVDSLLQLSDACRFQE 300 Query: 301 DQEMARDLVERALYSMECAFHPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCP 360 DQEMARDLVERALYSMECAFHPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCP Sbjct: 301 DQEMARDLVERALYSMECAFHPLFSLTSGACRLDYRRPENRSFYLALYKQMSFLEKRGCP 360 Query: 361 RTALEYCKLILSLEPDEDPLCMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAF 420 RTALEYCKLILSLEPDEDPLCMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAF Sbjct: 361 RTALEYCKLILSLEPDEDPLCMLLLIDHLALRARNYEYLIRLFQEWEAHRNLSQLPNFAF 420 Query: 421 SVPLAYFLLSQQTDLPECEQSSARQKASLLIQQALTMFPGVLLPLLESCSVRPDASVSSH 480 SVPLAYFLLSQQTDLPECEQSSARQKASLLIQQALTMFPGVLLPLLESCSVRPDASVSSH Sbjct: 421 SVPLAYFLLSQQTDLPECEQSSARQKASLLIQQALTMFPGVLLPLLESCSVRPDASVSSH 480 Query: 481 RFFGPNAEISQPPALSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC 540 RFFGPNAEISQPPALSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC Sbjct: 481 RFFGPNAEISQPPALSQLVNLYLGRSHFLWKEPATMSWLEENVHEVLQAVDAGDPAVEAC 540 Query: 541 ENRRKVLYQRAPRNIHRHVILSEIKEAVAALPPDVTTQSVMGFDPLPPSDTIYSYVRPER 600 ENRRKVLYQRAPRNIHRHVILSEIKEAVAALPPDVTTQSVMGFDPLPPSDTIYSYVRPER Sbjct: 541 ENRRKVLYQRAPRNIHRHVILSEIKEAVAALPPDVTTQSVMGFDPLPPSDTIYSYVRPER 600 Query: 601 LSPISHGNTIALFFRSLLPNYTMEGERPEEGVAGGLNRNQGLNRLMLAVRDMMANFHLND 660 LSPISHGNTIALFFRSLLPNYTMEGERPEEGVAGGLNRNQGLNRLMLAVRDMMANFHLND Sbjct: 601 LSPISHGNTIALFFRSLLPNYTMEGERPEEGVAGGLNRNQGLNRLMLAVRDMMANFHLND 660 Query: 661 LEAPHEDDAEGEGEWD 676 LEAPHEDDAEGEGEWD Sbjct: 661 LEAPHEDDAEGEGEWD 676 >gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] Length = 2454 Score = 40.4 bits (93), Expect = 0.005 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Query: 43 LGVRRPGGAGKEGVRVNNRFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNT 102 +G GG GK G ++ F++++ + P C D ++ NKG + Sbjct: 1819 VGNNSEGGRGKAGAKLFQDFQMLS--RIWTHP-------WCLQLDYISKENKGYFDEDSM 1869 Query: 103 ESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTGEASENGLEDI 150 + D ET S S K +KK KK K SS+G S+N +E I Sbjct: 1870 DEFIASDSDETSMSLSSDDYTKKKKKGKKGKKDSSSSGSGSDNDVEVI 1917 >gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] Length = 2492 Score = 40.4 bits (93), Expect = 0.005 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Query: 43 LGVRRPGGAGKEGVRVNNRFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNT 102 +G GG GK G ++ F++++ + P C D ++ NKG + Sbjct: 1857 VGNNSEGGRGKAGAKLFQDFQMLS--RIWTHP-------WCLQLDYISKENKGYFDEDSM 1907 Query: 103 ESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTGEASENGLEDI 150 + D ET S S K +KK KK K SS+G S+N +E I Sbjct: 1908 DEFIASDSDETSMSLSSDDYTKKKKKGKKGKKDSSSSGSGSDNDVEVI 1955 >gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] Length = 237 Score = 37.7 bits (86), Expect = 0.035 Identities = 24/117 (20%), Positives = 49/117 (41%) Query: 73 DPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQ 132 + +++G S K G+ ++ S + + + SE R+KKKK Sbjct: 68 EKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKN 127 Query: 133 KNKKSSTGEASENGLEDIDRILERIEDSTGLNRPGPAPLSSRKHVLYVEHRHLNPDT 189 ++ KSS SE + D + ++ + G + S+K +Y E + L+ ++ Sbjct: 128 RSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSES 184 >gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] Length = 247 Score = 37.7 bits (86), Expect = 0.035 Identities = 24/117 (20%), Positives = 49/117 (41%) Query: 73 DPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQ 132 + +++G S K G+ ++ S + + + SE R+KKKK Sbjct: 78 EKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKN 137 Query: 133 KNKKSSTGEASENGLEDIDRILERIEDSTGLNRPGPAPLSSRKHVLYVEHRHLNPDT 189 ++ KSS SE + D + ++ + G + S+K +Y E + L+ ++ Sbjct: 138 RSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSES 194 >gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein [Homo sapiens] Length = 593 Score = 34.7 bits (78), Expect = 0.30 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 16/116 (13%) Query: 91 PGNKGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTGEASENGLEDI 150 PG+ GRG+ G E + AS + K K +++ + GE E ED Sbjct: 99 PGSPGRGREGPGEEHFE-----------DMASDEDMKPKWEEEEMEEDLGEDEEEEEEDY 147 Query: 151 DRILERIEDSTGLNRPGPAPLSSRKHVLYVEHRHLNPDTELKRYFGARAILGEQRP 206 + E ED GL PGPA L + + R P + R + G++RP Sbjct: 148 EDEEEE-EDEEGLGPPGPASLGTTA----LFPRKAQPPQAFRGDGVPRVLGGQERP 198 >gi|42560244 peptidylprolyl isomerase G [Homo sapiens] Length = 754 Score = 34.7 bits (78), Expect = 0.30 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 6/57 (10%) Query: 101 NTESKTDGDDTETVPSEQS------HASGKLRKKKKKQKNKKSSTGEASENGLEDID 151 +++S +D D+E+ E+S H + KK+K+K KKS +SE+ E+++ Sbjct: 209 DSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLE 265 >gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo sapiens] Length = 1152 Score = 34.3 bits (77), Expect = 0.39 Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 34/139 (24%) Query: 11 GEQRGQEPLGPGALHFDLRDDDDAEEEGPKRELGVRRPGGAGKEGVRVNNRFELINIDDL 70 GE G+E G G ++++ EEEG + G G G+E Sbjct: 977 GEGEGEEEEGEGE-----GEEEEGEEEGEEEGEGEEEGEGEGEE---------------- 1015 Query: 71 EDDPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKK 130 E++ V GE G +G G+ E + +G++ E + + + R++++ Sbjct: 1016 EEEGEVEGE----------VEGEEGEGEGEEEEGEEEGEERE--KEGEGEENRRNREEEE 1063 Query: 131 KQKNKKSSTGEASENGLED 149 +++ K TGE EN +D Sbjct: 1064 EEEGKYQETGE-EENERQD 1081 Score = 31.6 bits (70), Expect = 2.5 Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 10 RGEQRGQEPLGPGALHFDLRDDDDAEEEGPKRE------------LGVRRPGGAGKEGVR 57 +GE+ G+E G G + +D E EG + E G G G+EG Sbjct: 920 KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEG 979 Query: 58 VNNRFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTE-TVPS 116 E + E++ GE G + G + + G E + +G++ E Sbjct: 980 EGEEEEGEG-EGEEEEGEEEGEEEGEGEEEGEGEGEE--EEEGEVEGEVEGEEGEGEGEE 1036 Query: 117 EQSHASGKLRKKK-KKQKNKKSSTGEASENG 146 E+ G+ R+K+ + ++N+++ E E G Sbjct: 1037 EEGEEEGEEREKEGEGEENRRNREEEEEEEG 1067 >gi|50962882 G patch domain containing 8 [Homo sapiens] Length = 1502 Score = 34.3 bits (77), Expect = 0.39 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 11/117 (9%) Query: 26 FDLRDDDDAEEEGPKRELGVRRPGGAGKEGVRVNNRFELINIDDLEDDPVVNGERSGCAL 85 F L + DA +G ++ + G + K+ ++ + E ++ + +V RS Sbjct: 576 FKLSRNKDARTKGTEKPKDI---GSSSKDHLQGLDPGEPNKSKEVGGEKIV---RSSGGR 629 Query: 86 TDAVAPGNKGRGQRGNTESKTDGDDTE----TVPSEQSHASGKLRKKKKKQKNKKSS 138 DA A G+ G + G +TE ++PS++ SGK + KKK+K+KKSS Sbjct: 630 MDAPASGSACSGLNKQEPGGSHGSETEDTGRSLPSKKER-SGKSHRHKKKKKHKKSS 685 >gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] Length = 2817 Score = 34.3 bits (77), Expect = 0.39 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 94 KGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTGEAS---ENGLEDI 150 K R QRG+ E+ TD + E+ + S + GKL K++++ +NKK +S +N + Sbjct: 1256 KRRRQRGS-ETDTDSEIHESASDKDSLSKGKLPKREERPENKKPVKPHSSFKPDNHVRID 1314 Query: 151 DRILER 156 +R+LE+ Sbjct: 1315 NRLLEK 1320 >gi|7661950 SH2 domain binding protein 1 [Homo sapiens] Length = 1173 Score = 33.1 bits (74), Expect = 0.86 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 30/104 (28%) Query: 46 RRPGGAGKEGVRVNNRFELINIDDLEDDPVVNGERSGCALTDAVAPGNKGRGQRGNTESK 105 +R GG G+ + E +N DD +DD P +K + +R + S+ Sbjct: 902 KRGGGGGRRSKKGGEFDEFVN-DDTDDD----------------LPISKKKKRRKGSGSE 944 Query: 106 TDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTG---EASENG 146 +G+D E G RKKKK++++ K G + +ENG Sbjct: 945 QEGEDEE----------GGERKKKKRRRHPKGEEGSDDDETENG 978 >gi|151301228 formin binding protein 3 [Homo sapiens] Length = 930 Score = 33.1 bits (74), Expect = 0.86 Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 80 RSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSST 139 RSG +D+ + + +R +ES++ + + + SE+S+ K KKK K++ KS + Sbjct: 802 RSG---SDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDS 858 Query: 140 GEASENGLED 149 E+ +D Sbjct: 859 PESDAEREKD 868 >gi|19923475 tRNA methyltransferase 6 [Homo sapiens] Length = 497 Score = 33.1 bits (74), Expect = 0.86 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 121 ASGKLRKKKKKQKNKKSSTGEASENGLEDIDRILERIEDSTGLNRPGPAPLSSRKHVLYV 180 ++G L +K+ ++ + S EA E+ + +E I GP S+K Y+ Sbjct: 288 SNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDP--EHKGPKERGSKKD--YI 343 Query: 181 EHRHLNPDTELKRYFGARAILGEQ 204 + + + + KR+ A A+L E+ Sbjct: 344 QEKQRRQEEQRKRHLEAAALLSER 367 >gi|157042792 coiled-coil domain containing 64B [Homo sapiens] Length = 508 Score = 33.1 bits (74), Expect = 0.86 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 125 LRKKKKKQKNKKSST--GEASENGLEDIDRILER-IEDSTGLNRPGPAPLSSRKHVLYVE 181 LR++ ++QK ++ GEA + L D D + + +E S LNR S + +L Sbjct: 380 LREELQRQKELRAQEDPGEALHSALSDRDEAVNKALELSLQLNRVSLERDSLSRELLRAI 439 Query: 182 HRHLNPDTELKRYFG-ARAILGEQRPRQRQRVYPKCTWLTTPKSTWPRYS 230 + + EL+ + + ++G+Q QRQ+ +TP+ PR+S Sbjct: 440 RQKVALTQELEAWQDDMQVVIGQQLRSQRQKELSASASSSTPRRAAPRFS 489 >gi|56090620 NFKB activating protein-like [Homo sapiens] Length = 402 Score = 33.1 bits (74), Expect = 0.86 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 101 NTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTGEASENGLEDIDRILERIEDS 160 N+ES T+ D + ++ K +K K K+K K + E+S++ +D + E + ++ Sbjct: 207 NSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSE---EDLSEA 263 Query: 161 TGLNRPGPA 169 T + +P A Sbjct: 264 TWMEQPNVA 272 >gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo sapiens] Length = 674 Score = 32.7 bits (73), Expect = 1.1 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 29/150 (19%) Query: 18 PLGPGALHFDLRDDDDAEEEGPKRELGVRRPGGAGKEGVRVNNRFELINIDDLEDDPVVN 77 PL P L L+ D E E GV G K ++R +++ +D+ V Sbjct: 141 PLSPSLLIRTLQGSDKNPGEEKAEEEGVAEEEGVNKFSYPPSHRECCPAVEEEDDEEAVK 200 Query: 78 GERSGCALTDAVAPGNK--------GRGQRGNTESK----------------TDGDDTET 113 E + T A++PG+K G + TE K + G D Sbjct: 201 KEAHRTS-TSALSPGSKPSTWVSCPGEEENQATEDKRTERSKGARKTSVSPRSSGSD--- 256 Query: 114 VPSEQSHASGKLRKKKKKQKNKKSSTGEAS 143 P + SG+ ++K+++ +K++ GEA+ Sbjct: 257 -PRSWEYRSGEASEEKEEKAHKETGKGEAA 285 >gi|110611228 utrophin [Homo sapiens] Length = 3433 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 99 RGNTESKTDGDDTETVPSEQSHASGK-LRKKKKKQKNKKSSTGEASENGLEDIDRILERI 157 R N +SKT E P E++ K +RK+ + K K S + N + +D+ LE++ Sbjct: 2639 RRNLQSKT-----ELTPEERAQKIAKAMRKQSSEVKEKWESLNAVTSNWQKQVDKALEKL 2693 Query: 158 EDSTG 162 D G Sbjct: 2694 RDLQG 2698 >gi|56676397 ankyrin repeat domain 11 [Homo sapiens] Length = 2663 Score = 32.7 bits (73), Expect = 1.1 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 94 KGRGQRGNTESKTDGDDTETVP--SEQSHASGKLRKKKKKQKNKKSSTGEASENGLEDID 151 K R R + +S D + + +P +E+ HA+ K K K+K+ K + E + D + Sbjct: 1218 KDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERKSSRSADAE 1277 Query: 152 R-ILERIED 159 + +LE++E+ Sbjct: 1278 KSLLEKLEE 1286 >gi|84875539 phosphoribosyl pyrophosphate synthetase 2 isoform 1 [Homo sapiens] Length = 321 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Query: 509 LWKEPATMSWLEENVHE----VLQAVDAGD-PAVEACENRRKVLY------QRAPRNIHR 557 L+ EPA + W+ EN+ E ++ + DAG V + +R V + ++ + R Sbjct: 148 LYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDR 207 Query: 558 HVILSEIKEAVAALPPDV 575 V++ ++K+ VA L D+ Sbjct: 208 MVLVGDVKDRVAILVDDM 225 >gi|4506129 phosphoribosyl pyrophosphate synthetase 2 isoform 2 [Homo sapiens] Length = 318 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Query: 509 LWKEPATMSWLEENVHE----VLQAVDAGD-PAVEACENRRKVLY------QRAPRNIHR 557 L+ EPA + W+ EN+ E ++ + DAG V + +R V + ++ + R Sbjct: 145 LYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDR 204 Query: 558 HVILSEIKEAVAALPPDV 575 V++ ++K+ VA L D+ Sbjct: 205 MVLVGDVKDRVAILVDDM 222 >gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] Length = 344 Score = 32.3 bits (72), Expect = 1.5 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 9/86 (10%) Query: 93 NKGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSSTGEA-SENGLEDID 151 +KGR R ++SK D SH+ + R K + +K++ S + ENG DI Sbjct: 238 SKGRKSRSKSKSKPKSD-------RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDI- 289 Query: 152 RILERIEDSTGLNRPGPAPLSSRKHV 177 + R + N P P P S + V Sbjct: 290 KSKSRSRSQSRSNSPLPVPPSKARSV 315 >gi|169163644 PREDICTED: similar to CG12975 [Homo sapiens] Length = 135 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 222 PKSTWPRYSKPGLSMRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESME 271 PK W + + S+RL++ KG +E +EE+ + H L+ VE +E Sbjct: 57 PKVEWSAFLEAADSLRLIQMPKG-PVEGYEENEEFLRTMHHLLLEVEVIE 105 >gi|88955003 PREDICTED: similar to CG12975 [Homo sapiens] Length = 135 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 222 PKSTWPRYSKPGLSMRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESME 271 PK W + + S+RL++ KG +E +EE+ + H L+ VE +E Sbjct: 57 PKVEWSAFLEAADSLRLIQMPKG-PVEGYEENEEFLRTMHHLLLEVEVIE 105 >gi|41190515 PREDICTED: similar to CG12975 [Homo sapiens] Length = 135 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 222 PKSTWPRYSKPGLSMRLLESKKGLSFFAFEHSEEYQQAQHKFLVAVESME 271 PK W + + S+RL++ KG +E +EE+ + H L+ VE +E Sbjct: 57 PKVEWSAFLEAADSLRLIQMPKG-PVEGYEENEEFLRTMHHLLLEVEVIE 105 >gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens] Length = 1072 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 13/80 (16%) Query: 94 KGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSS--------TGEASEN 145 + + + G K D +D T Q H K +K KK +KNKKS T EAS+ Sbjct: 905 RSKNKNGYEAGKKDHEDFFT---PQQH--DKSKKPKKDKKNKKSKQPLYSSIVTVEASKP 959 Query: 146 GLEDIDRILERIEDSTGLNR 165 + D + E++ DS + R Sbjct: 960 NGQRYDSVNEKLSDSPSMGR 979 >gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens] Length = 1200 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 13/80 (16%) Query: 94 KGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSS--------TGEASEN 145 + + + G K D +D T Q H K +K KK +KNKKS T EAS+ Sbjct: 858 RSKNKNGYEAGKKDHEDFFT---PQQH--DKSKKPKKDKKNKKSKQPLYSSIVTVEASKP 912 Query: 146 GLEDIDRILERIEDSTGLNR 165 + D + E++ DS + R Sbjct: 913 NGQRYDSVNEKLSDSPSMGR 932 >gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens] Length = 1069 Score = 32.0 bits (71), Expect = 1.9 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 13/80 (16%) Query: 94 KGRGQRGNTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNKKSS--------TGEASEN 145 + + + G K D +D T Q H K +K KK +KNKKS T EAS+ Sbjct: 905 RSKNKNGYEAGKKDHEDFFT---PQQH--DKSKKPKKDKKNKKSKQPLYSSIVTVEASKP 959 Query: 146 GLEDIDRILERIEDSTGLNR 165 + D + E++ DS + R Sbjct: 960 NGQRYDSVNEKLSDSPSMGR 979 >gi|4506567 RNA (guanine-7-) methyltransferase [Homo sapiens] Length = 476 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%) Query: 101 NTESKTDGDDTETVPSEQSHASGKLRKKKKKQKNK-----KSSTGEASEN----GLEDID 151 +T SK D E VP E+ + KK+K++ + KSSTG+ ++N LED+ Sbjct: 76 DTPSKKRKLDPEIVPEEKDCGDAEGNSKKRKRETEDVPKDKSSTGDGTQNKRKIALEDVP 135 Query: 152 RILERIED 159 + +E+ Sbjct: 136 EKQKNLEE 143 >gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens] Length = 600 Score = 32.0 bits (71), Expect = 1.9 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 25/122 (20%) Query: 33 DAEEEGPKRELGVRRPGGAGKEGVRVNNRFELINIDDLEDDPVVNGERSGCALTDAVAPG 92 + E++G R G+ R +E E+ + EDD V GER TD G Sbjct: 188 EEEKKGSDRNTGLSRDKDKKRE--------EMKEVAKKEDDEKVKGERRN---TDTRKEG 236 Query: 93 NKGRGQRGNTESK--------------TDGDDTETVPSEQSHASGKLRKKKKKQKNKKSS 138 K + GNT+ K T DD + +E H K K K++ Sbjct: 237 EKMKRAGGNTDMKKEDEKVKRGTGNTDTKKDDEKVKKNEPLHEKEAKDDSKTKTPEKQTP 296 Query: 139 TG 140 +G Sbjct: 297 SG 298 >gi|33589824 cell growth regulator with EF-hand domain 1 [Homo sapiens] Length = 301 Score = 32.0 bits (71), Expect = 1.9 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 11/108 (10%) Query: 13 QRGQEPLGPGALHFDLRDDDDAEEEGPKRELG-VRRPGG-AGKEGVRVNNRFELINIDDL 70 Q QE GP R++ + E + L V+ PGG A +G R E + Sbjct: 179 QETQEAPGP-------REEAKGQVEARRESLDPVQEPGGQAEADGDVPGPRGEAEGQAEA 231 Query: 71 EDD-PVVNGERSGCALTDAVAPGNKGRGQRGNTESKTDGDDTETVPSE 117 + D P GE G A + APG +G G E++ +G++ + +P E Sbjct: 232 KGDAPGPRGEAGGQAEAEGDAPGPRGEA-GGQAEARENGEEAKELPGE 278 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.135 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,647,719 Number of Sequences: 37866 Number of extensions: 1397227 Number of successful extensions: 5452 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 78 Number of HSP's that attempted gapping in prelim test: 5303 Number of HSP's gapped (non-prelim): 174 length of query: 676 length of database: 18,247,518 effective HSP length: 109 effective length of query: 567 effective length of database: 14,120,124 effective search space: 8006110308 effective search space used: 8006110308 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.