Guide to the Human Genome
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Name: PRPS2 Sequence: fasta or formatted (321aa) NCBI GI: 84875539
Description:

phosphoribosyl pyrophosphate synthetase 2 isoform 1

Referenced in:

Pentose Phosphate Pathway

Other entries for this name:
alt prot [318aa] phosphoribosyl pyrophosphate synthetase 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         32           2
 C cysteine            2.2          7           1
 D aspartate           6.5         21           2
 E glutamate           5.6         18           1
 F phenylalanine       2.8          9           2
 G glycine             5.6         18           2
 H histidine           2.8          9           1
 I isoleucine         10.0         32           2
 K lysine              5.9         19           2
 L leucine             7.2         23           2
 M methionine          2.8          9           1
 N asparagine          4.7         15           2
 P proline             3.1         10           1
 Q glutamine           3.1         10           1
 R arginine            4.7         15           2
 S serine              7.5         24           3
 T threonine           4.0         13           1
 V valine              9.3         30           3
 W tryptophan          0.6          2           1
 Y tyrosine            1.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoribosyl pyrophosphate synthetase 2 isoform 1 ... 
PRPS2                 0.982   phosphoribosyl pyrophosphate synthetase 2 isoform 2 [...
PRPS1                 0.949   phosphoribosyl pyrophosphate synthetase 1 
PRPS1L1               0.904   phosphoribosyl pyrophosphate synthetase 1-like 1 [Ho...
PRPSAP2               0.420   phosphoribosyl pyrophosphate synthetase-associated pr...
PRPSAP1               0.390   phosphoribosyl pyrophosphate synthetase-associated ...
LOC100130673          0.139   PREDICTED: similar to hCG1804306 
LOC100130673          0.139   PREDICTED: similar to hCG1804306 
LOC100130673          0.139   PREDICTED: similar to hCG1804306 
LOC100130673          0.139   PREDICTED: similar to hCG1804306 
TCF25                 0.013   NULP1 
CES3                  0.010   carboxylesterase 3 
GBP4                  0.007   guanylate binding protein 4 
HIVEP1                0.005   human immunodeficiency virus type I enhancer bindin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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