Search of human proteins with 8922927

Search of human proteins with 8922927

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922927 hypothetical protein LOC55321 [Homo sapiens]
         (256 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922927 hypothetical protein LOC55321 [Homo sapiens]               511   e-145
gi|23308545 transmembrane protein 74 [Homo sapiens]                   151   6e-37
gi|4502247 armadillo repeat protein [Homo sapiens]                     38   0.008
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]            37   0.022
gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ...    37   0.022
gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ...    37   0.022
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    36   0.029
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]       35   0.083
gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]       34   0.14 
gi|239754810 PREDICTED: hypothetical protein [Homo sapiens]            33   0.19 
gi|118918411 zinc finger protein 777 [Homo sapiens]                    33   0.19 
gi|38373671 SEC24-related protein C [Homo sapiens]                     33   0.19 
gi|38373669 SEC24-related protein C [Homo sapiens]                     33   0.19 
gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens]                    33   0.24 
gi|49472835 bridging integrator 2 [Homo sapiens]                       33   0.32 
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]           32   0.54 
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]           32   0.54 
gi|123701326 zinc finger protein 831 [Homo sapiens]                    32   0.54 
gi|226437579 NAC alpha domain containing [Homo sapiens]                32   0.71 
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]             32   0.71 
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]             32   0.71 
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]     32   0.71 
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]     32   0.71 
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]     32   0.71 
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]     32   0.71 
gi|56549696 E1A binding protein p400 [Homo sapiens]                    32   0.71 
gi|148806908 fibronectin type III domain containing 1 [Homo sapi...    32   0.71 
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           32   0.71 
gi|6912458 calcineurin binding protein 1 [Homo sapiens]                32   0.71 
gi|30039694 zinc finger protein 598 [Homo sapiens]                     32   0.71 

>gi|8922927 hypothetical protein LOC55321 [Homo sapiens]
          Length = 256

 Score =  511 bits (1317), Expect = e-145
 Identities = 256/256 (100%), Positives = 256/256 (100%)

Query: 1   MPPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVE 60
           MPPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVE
Sbjct: 1   MPPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVE 60

Query: 61  NACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVD 120
           NACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVD
Sbjct: 61  NACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVD 120

Query: 121 YGFVSALVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYYARLGSHLDRCIIAG 180
           YGFVSALVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYYARLGSHLDRCIIAG
Sbjct: 121 YGFVSALVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYYARLGSHLDRCIIAG 180

Query: 181 LGLLTVGGMLLSVLLMVSLCKGELYRRRTFVPGKGSRKTYGSINLRMRQLNGDGGQALVE 240
           LGLLTVGGMLLSVLLMVSLCKGELYRRRTFVPGKGSRKTYGSINLRMRQLNGDGGQALVE
Sbjct: 181 LGLLTVGGMLLSVLLMVSLCKGELYRRRTFVPGKGSRKTYGSINLRMRQLNGDGGQALVE 240

Query: 241 NEVVQVSETSHTLQRS 256
           NEVVQVSETSHTLQRS
Sbjct: 241 NEVVQVSETSHTLQRS 256


>gi|23308545 transmembrane protein 74 [Homo sapiens]
          Length = 305

 Score =  151 bits (381), Expect = 6e-37
 Identities = 108/242 (44%), Positives = 138/242 (57%), Gaps = 35/242 (14%)

Query: 24  PMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETHFQNPGNT---- 79
           P A PPGL L + +N   A R+             V N C  S+E ET F          
Sbjct: 78  PDAFPPGL-LHSGNNQITAERK-------------VCNCC--SQELETSFTYVDKNINLE 121

Query: 80  -RLGSSPSPPGG--------VSSLPRSQRDDLSLHSEE--GPALEPVS--RPVDYGFVSA 126
            R  SSPS  G          +    SQ   +SL SEE    + E  S  + +DYGF+SA
Sbjct: 122 QRNRSSPSAKGHNHPGELGWENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFISA 181

Query: 127 LVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYYARLGSHLDRCIIAGLGLLTV 186
           ++FLV+GILLV+ +Y +PRE  V+P+TV AREMERLE   ARLG+HLDRC+IAGL LLT+
Sbjct: 182 ILFLVTGILLVIISYIVPREVTVDPNTVAAREMERLEKESARLGAHLDRCVIAGLCLLTL 241

Query: 187 GGMLLSVLLMVSLCKGELYRRRTFVPGKGSRKTYGSINLRMRQLNGDG--GQALVENEVV 244
           GG++LS LLM+S+ KGELYRR  F   K S K YGS N RM+    +     +LVE + +
Sbjct: 242 GGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNFRMKTSTNENTLELSLVEEDAL 301

Query: 245 QV 246
            V
Sbjct: 302 AV 303


>gi|4502247 armadillo repeat protein [Homo sapiens]
          Length = 962

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 35/119 (29%)

Query: 13  KGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETH 72
           +GP     PS+   S  GL ++        P R+ PLGP      G  + CF+   H   
Sbjct: 191 EGPEPRDSPSYGSLSR-GLGMR--------PPRAGPLGP------GPGDGCFTLPGHREA 235

Query: 73  FQNPGNTRLGSSPSPPGGVSSLPRSQRD---------DLSLHSEEGPALEPVSRPVDYG 122
           F       +G  P PPGG S   R Q +          L+   E GP LEP     DYG
Sbjct: 236 FP------VGPEPGPPGGRSLPERFQAEPYGLEDDTRSLAADDEGGPELEP-----DYG 283


>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 213

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 2   PPAQGYEFAAAKGPRDELGPSFPMASPPGLEL-KTLSNGPQAPRR-SAPLGPVAPTREG- 58
           P  Q +  AA+ G      P     S PGL   + LS  P+APR   AP   ++P R   
Sbjct: 45  PARQVFPAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPG 104

Query: 59  --VENACFSSE-EHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDL 102
              EN   +    H+T  + PG  R     +PP G    P S R  L
Sbjct: 105 AEPENKFVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGL 151


>gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo
           sapiens]
          Length = 213

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 2   PPAQGYEFAAAKGPRDELGPSFPMASPPGLEL-KTLSNGPQAPRR-SAPLGPVAPTREG- 58
           P  Q +  AA+ G      P     S PGL   + LS  P+APR   AP   ++P R   
Sbjct: 45  PARQVFPAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPG 104

Query: 59  --VENACFSSE-EHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDL 102
              EN   +    H+T  + PG  R     +PP G    P S R  L
Sbjct: 105 AEPENKFVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGL 151


>gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo
           sapiens]
          Length = 213

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 6/107 (5%)

Query: 2   PPAQGYEFAAAKGPRDELGPSFPMASPPGLEL-KTLSNGPQAPRR-SAPLGPVAPTREG- 58
           P  Q +  AA+ G      P     S PGL   + LS  P+APR   AP   ++P R   
Sbjct: 45  PARQVFPAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPG 104

Query: 59  --VENACFSSE-EHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDL 102
              EN   +    H+T  + PG  R     +PP G    P S R  L
Sbjct: 105 AEPENKFVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGL 151


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 36.2 bits (82), Expect = 0.029
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 17   DELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPT-----REGVENACFSSEEHET 71
            +EL P  PM   P  + +T   G     +  P  PVAPT     +  + N   +  + + 
Sbjct: 1158 EELAPVTPMEVYPECK-QTAGQGSPCEEQEEPRAPVAPTPPTLIKSDIVNEISNLSQGDA 1216

Query: 72   HFQNPGNTRLGSSPSPPGGVS-SLPRSQRDDLSLHSEEG 109
                PG+  L  SP P GG S S+      D+S   +EG
Sbjct: 1217 SASFPGSEPLLGSPDPEGGGSLSMELGVSTDVSPARDEG 1255



 Score = 31.6 bits (70), Expect = 0.71
 Identities = 29/117 (24%), Positives = 40/117 (34%), Gaps = 6/117 (5%)

Query: 2    PPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVEN 61
            PP  G    A +  ++ELG S P   PP L          +P     LG +      V  
Sbjct: 2275 PPPFGESRKALEVKKEELGASSPSYGPPNLGF------VDSPSSGTHLGGLELKTPDVFK 2328

Query: 62   ACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRP 118
            A  +    +   Q+PG       P P   ++  P S  D     S   P  +P   P
Sbjct: 2329 APLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTP 2385


>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
          Length = 654

 Score = 34.7 bits (78), Expect = 0.083
 Identities = 31/109 (28%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 1   MPPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVE 60
           MP  QG       GP    GP  PM  P GL     ++GP  P      GP  P  E  E
Sbjct: 519 MPGPQGPSIIGPPGPPGPHGPPGPM-GPHGLPGPKGTDGPMGPH-----GPAGPKGERGE 572

Query: 61  NACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEG 109
                       +  PG          PG     PR ++ DL    E+G
Sbjct: 573 KGAMGEPGPRGPYGLPGKDGEPGLDGFPG-----PRGEKGDLGEKGEKG 616


>gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]
          Length = 642

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 39/136 (28%), Positives = 49/136 (36%), Gaps = 19/136 (13%)

Query: 1   MPPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVE 60
           MP  QG       GP    GP  PM  P GL     ++GP  P      GP  P  E  E
Sbjct: 519 MPGPQGPSIIGPPGPPGPHGPPGPM-GPHGLPGPKGTDGPMGPH-----GPAGPKGERGE 572

Query: 61  NACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVD 120
                       +  PG          PG     PR ++ DL    E+G   E V+ P  
Sbjct: 573 KGAMGEPGPRGPYGLPGKDGEPGLDGFPG-----PRGEKGDL---GEKG---EKVTSPSQ 621

Query: 121 YGFVSALVFLVSGILL 136
           +  V  L+ L+   LL
Sbjct: 622 H--VPCLILLLLSALL 635


>gi|239754810 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 421

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 18/118 (15%)

Query: 15  PRD-ELGPSFPMASP-PGLELKT-------LSNGPQAPRRSAPLGPVAPT-REGVENACF 64
           P+D +  P   M +P PG  + T       L     A RRS  LGP  P  R G E    
Sbjct: 148 PQDGQCTPEISMVTPSPGWSVHTGDLDGHPLPRMVSAHRRSRWLGPPVPVVRVGEE---- 203

Query: 65  SSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVDYG 122
             E   +  ++PG+ RLG S  P G        Q+ +L + S +GP  +P+S+    G
Sbjct: 204 VQEPQSSCSRSPGSQRLGPSQRPLGHEEG---QQQPELRMASRKGPC-QPLSQTWSVG 257


>gi|118918411 zinc finger protein 777 [Homo sapiens]
          Length = 831

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 22/133 (16%)

Query: 1   MPPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRR-SAPLGPVAPTRE-- 57
           +P  +    A A  PR+ L   F     P  E+ +LS  P  PR+ S P    AP +E  
Sbjct: 14  VPQEETLRQAPAGLPRETL---FQSRVLPPKEIPSLS--PTIPRQGSLPQTSSAPKQETS 68

Query: 58  ---------GVENACFSSEEHETHFQNPGNTRLGSSPSPPGG----VSSLPRS-QRDDLS 103
                    G    C ++ E ET  Q P  ++ G+   PP      VS L  S    +  
Sbjct: 69  GRMPHVLQKGPSLLCSAASEQETSLQGPLASQEGTQYPPPAAAEQEVSLLSHSPHHQEAP 128

Query: 104 LHSEEGPALEPVS 116
           +HS E P  +P++
Sbjct: 129 VHSPEAPEKDPLT 141


>gi|38373671 SEC24-related protein C [Homo sapiens]
          Length = 1094

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 39/130 (30%), Positives = 50/130 (38%), Gaps = 12/130 (9%)

Query: 2   PPAQGYEF------AAAKG--PRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVA 53
           PP+ G  F      A+A G  P   L  S+P    P L       G Q P+RSAP    +
Sbjct: 153 PPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASS 212

Query: 54  PTREGVENACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALE 113
            T          S    T    PG +  G S S P  VSS P++      +    GP L 
Sbjct: 213 FTPPASGGPRLPS---MTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGP-LP 268

Query: 114 PVSRPVDYGF 123
           P+  P   G+
Sbjct: 269 PMHSPQQPGY 278


>gi|38373669 SEC24-related protein C [Homo sapiens]
          Length = 1094

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 39/130 (30%), Positives = 50/130 (38%), Gaps = 12/130 (9%)

Query: 2   PPAQGYEF------AAAKG--PRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVA 53
           PP+ G  F      A+A G  P   L  S+P    P L       G Q P+RSAP    +
Sbjct: 153 PPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASS 212

Query: 54  PTREGVENACFSSEEHETHFQNPGNTRLGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALE 113
            T          S    T    PG +  G S S P  VSS P++      +    GP L 
Sbjct: 213 FTPPASGGPRLPS---MTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGP-LP 268

Query: 114 PVSRPVDYGF 123
           P+  P   G+
Sbjct: 269 PMHSPQQPGY 278


>gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens]
          Length = 481

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 4/108 (3%)

Query: 11  AAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVA---PTREGVENACFSSE 67
           AA+ P     P  P    PG      S GP  P+   P G  A   P            +
Sbjct: 372 AAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQ 431

Query: 68  EHETHFQNPGNTRLGSSP-SPPGGVSSLPRSQRDDLSLHSEEGPALEP 114
           ++ + F + G+ +LG  P S P G+S+ P       S  + + P   P
Sbjct: 432 QNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNP 479


>gi|49472835 bridging integrator 2 [Homo sapiens]
          Length = 565

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 2   PPAQGYEFAAAKGPRDELG--PSFPMASPPGLELK---TLSNGPQAPRRSAPLGPVAPTR 56
           PP++     A   PR   G  PS P AS  G       +L  G  +PR S  + P     
Sbjct: 413 PPSRPPPPRATASPRPSSGNIPSSPTASGGGSPTSPRASLGTGTASPRTSLEVSPNPEPP 472

Query: 57  EGVENACFSSEEHETHFQNPGNTRLGSSP--------SPPGGVSSLPRSQRDD--LSLHS 106
           E       + E    H QNP    L +SP        S PG    +   ++D+  +S +S
Sbjct: 473 EKPVRTPEAKENENIHNQNP--EELCTSPTLMTSQVASEPGEAKKMEDKEKDNKLISANS 530

Query: 107 EEG 109
            EG
Sbjct: 531 SEG 533


>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
          Length = 2426

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 17/101 (16%)

Query: 21   PSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETHFQNPGNTR 80
            P  P   PP +        P  P    P+ P  P  E  E     +E+     +N   T 
Sbjct: 1147 PPLPPEEPPTM--------PPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTE 1198

Query: 81   LGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVDY 121
            + SSPS        P   + ++S         EP + P DY
Sbjct: 1199 VPSSPSEESVSQPEPPVSQSEIS---------EPSAVPTDY 1230


>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
          Length = 2303

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 17/101 (16%)

Query: 21   PSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETHFQNPGNTR 80
            P  P   PP +        P  P    P+ P  P  E  E     +E+     +N   T 
Sbjct: 1147 PPLPPEEPPTM--------PPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTE 1198

Query: 81   LGSSPSPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVDY 121
            + SSPS        P   + ++S         EP + P DY
Sbjct: 1199 VPSSPSEESVSQPEPPVSQSEIS---------EPSAVPTDY 1230


>gi|123701326 zinc finger protein 831 [Homo sapiens]
          Length = 1677

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 56/212 (26%), Positives = 78/212 (36%), Gaps = 63/212 (29%)

Query: 14   GPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLG------------PVAPT------ 55
            GPRD+  P  P A+P   E  +L+  PQAPR  + L             P A T      
Sbjct: 898  GPRDKATPLHP-AAPAPAEHPSLATPPQAPRVLSALADNAFSPKYLLRLPQAETPLPLPI 956

Query: 56   ----REGVENACFSS-EEHETHFQNPGNTRLGS--SPSPPGGVS-------------SLP 95
                R   ++ C S   E    F   G   LG+  SPSP  G S             S P
Sbjct: 957  PWGPRHSQDSLCSSGWPEERASFVGSG---LGTPLSPSPASGPSPGEADSILEDPSCSRP 1013

Query: 96   RSQRDDLSLHSEEGPALEPVSRPVDYGFVSALVFLVSGILLVVTAYAIPREARVNPDTVT 155
            +  R    L  ++G  +   SRP             +   L ++A   PREA  +P T T
Sbjct: 1014 QDGRKGAQLGGDKGDRM-ATSRP-------------AARELPISAPGAPREATSSPPTPT 1059

Query: 156  AR-------EMERLEMYYARLGSHLDRCIIAG 180
                     E +   ++   +GS L R  ++G
Sbjct: 1060 CEAHLVQDMEGDSHRIHRLCMGSTLARARLSG 1091


>gi|226437579 NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 2    PPAQGYEFAAAK----------GPRDELGPSFPMASP--PGLELKTLS----NGPQAPRR 45
            PP  G + AAA           GPR  L P  P+ SP    ++ K L+       Q P  
Sbjct: 1272 PPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPP 1331

Query: 46   SAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSP-SPPGGVSSLPRSQRDDLSL 104
            S P  P  P  +G+  +    +E E   +      LGS   S   G SS    ++D L+ 
Sbjct: 1332 SGPQSPAGP--QGL--SAPEQQEDEDSLEEDSPRALGSGQHSDSHGESSAELDEQDILAP 1387

Query: 105  HSEEGPALEP 114
             + + PA  P
Sbjct: 1388 QTVQCPAQAP 1397


>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
          Length = 1123

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 50/209 (23%), Positives = 73/209 (34%), Gaps = 26/209 (12%)

Query: 2   PPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVEN 61
           PP+           RD+  P    AS P L++++      A RRS+PL      ++G   
Sbjct: 236 PPSYKLPLPGPYDSRDDF-PLRKTASEPNLKVRSRLKQKVAERRSSPL---LRRKDGTVI 291

Query: 62  ACFSSEEHETHFQNPG-----NTRLGSSPSPP----------GGVSSLPRSQRDDLSLHS 106
           + F     E     PG     N+  GS PS P          G   S+P    + L  H 
Sbjct: 292 STFKKRAVEITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR 351

Query: 107 EEGPALEPVSRPVDYGFVSALVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYY 166
               AL   S P  +   ++       + L  T          +P   T +E ER  +  
Sbjct: 352 ----ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQS 407

Query: 167 ARLGSHLDRCIIAGLGLLTVGGMLLSVLL 195
            R G  L       +   ++ G LL V L
Sbjct: 408 LRQGGTLTGKF---MSTSSIPGCLLGVAL 433


>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
          Length = 1122

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 50/209 (23%), Positives = 73/209 (34%), Gaps = 26/209 (12%)

Query: 2   PPAQGYEFAAAKGPRDELGPSFPMASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVEN 61
           PP+           RD+  P    AS P L++++      A RRS+PL      ++G   
Sbjct: 235 PPSYKLPLPGPYDSRDDF-PLRKTASEPNLKVRSRLKQKVAERRSSPL---LRRKDGTVI 290

Query: 62  ACFSSEEHETHFQNPG-----NTRLGSSPSPP----------GGVSSLPRSQRDDLSLHS 106
           + F     E     PG     N+  GS PS P          G   S+P    + L  H 
Sbjct: 291 STFKKRAVEITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR 350

Query: 107 EEGPALEPVSRPVDYGFVSALVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEMYY 166
               AL   S P  +   ++       + L  T          +P   T +E ER  +  
Sbjct: 351 ----ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQS 406

Query: 167 ARLGSHLDRCIIAGLGLLTVGGMLLSVLL 195
            R G  L       +   ++ G LL V L
Sbjct: 407 LRQGGTLTGKF---MSTSSIPGCLLGVAL 432


>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 2    PPAQGYEFAAAK----------GPRDELGPSFPMASP--PGLELKTLS----NGPQAPRR 45
            PP  G + AAA           GPR  L P  P+ SP    ++ K L+       Q P  
Sbjct: 1232 PPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPP 1291

Query: 46   SAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSP-SPPGGVSSLPRSQRDDLSL 104
            S P  P  P  +G+  +    +E E   +      LGS   S   G SS    ++D L+ 
Sbjct: 1292 SGPQSPAGP--QGL--SAPEQQEDEDSLEEDSPRALGSGQHSDSHGESSAELDEQDILAP 1347

Query: 105  HSEEGPALEP 114
             + + PA  P
Sbjct: 1348 QTVQCPAQAP 1357


>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 2    PPAQGYEFAAAK----------GPRDELGPSFPMASP--PGLELKTLS----NGPQAPRR 45
            PP  G + AAA           GPR  L P  P+ SP    ++ K L+       Q P  
Sbjct: 1232 PPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPP 1291

Query: 46   SAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSP-SPPGGVSSLPRSQRDDLSL 104
            S P  P  P  +G+  +    +E E   +      LGS   S   G SS    ++D L+ 
Sbjct: 1292 SGPQSPAGP--QGL--SAPEQQEDEDSLEEDSPRALGSGQHSDSHGESSAELDEQDILAP 1347

Query: 105  HSEEGPALEP 114
             + + PA  P
Sbjct: 1348 QTVQCPAQAP 1357


>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 2    PPAQGYEFAAAK----------GPRDELGPSFPMASP--PGLELKTLS----NGPQAPRR 45
            PP  G + AAA           GPR  L P  P+ SP    ++ K L+       Q P  
Sbjct: 1272 PPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPP 1331

Query: 46   SAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSP-SPPGGVSSLPRSQRDDLSL 104
            S P  P  P  +G+  +    +E E   +      LGS   S   G SS    ++D L+ 
Sbjct: 1332 SGPQSPAGP--QGL--SAPEQQEDEDSLEEDSPRALGSGQHSDSHGESSAELDEQDILAP 1387

Query: 105  HSEEGPALEP 114
             + + PA  P
Sbjct: 1388 QTVQCPAQAP 1397


>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 2    PPAQGYEFAAAK----------GPRDELGPSFPMASP--PGLELKTLS----NGPQAPRR 45
            PP  G + AAA           GPR  L P  P+ SP    ++ K L+       Q P  
Sbjct: 1232 PPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPPP 1291

Query: 46   SAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSP-SPPGGVSSLPRSQRDDLSL 104
            S P  P  P  +G+  +    +E E   +      LGS   S   G SS    ++D L+ 
Sbjct: 1292 SGPQSPAGP--QGL--SAPEQQEDEDSLEEDSPRALGSGQHSDSHGESSAELDEQDILAP 1347

Query: 105  HSEEGPALEP 114
             + + PA  P
Sbjct: 1348 QTVQCPAQAP 1357


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 1   MPPAQGY-----EFAAAKGPRDELGPSFPMASPPGLELKTLSNG-PQAPRRSAPLGPVAP 54
           MP AQG      + A   G R       P   PP     +L    PQ P R  P G   P
Sbjct: 509 MPTAQGGMPPTPQAAQLAGQRQSQQQYDPSTGPPVQNAASLHTPLPQLPGRLPPAG--VP 566

Query: 55  TREGVENACFSSE----EHETHFQNPGNTRLGSSP--SPPGGVSSLPRSQRDDLSLH 105
           T        F+ +    E +T  Q P  T+  + P  +PP     +P SQ   L+LH
Sbjct: 567 TAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQPAQLALH 623


>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
          Length = 1894

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 21/102 (20%)

Query: 39   GPQA----PRRSAPLGPVAPTREGVENACFSS------EEHETHFQNPGNTRLGSSPSPP 88
            GPQ+    P R+AP     P++  + +    S      EE +  F   G   L SS  P 
Sbjct: 1143 GPQSRARVPSRAAPGKSEPPSKRPLSSKSQQSVSAEDDEEEDAGFFKGGKEDLLSSSVPK 1202

Query: 89   GGVSSLPRSQRD-DLSLHSEE----------GPALEPVSRPV 119
               SS PR  +D D SL  EE          G +L PV RP+
Sbjct: 1203 WPSSSTPRGGKDADGSLAKEEREPAIALAPRGGSLAPVKRPL 1244


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 23/93 (24%)

Query: 26  ASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSP 85
           A+PPG        GP AP   +P  PV   R          + +E H         G+ P
Sbjct: 718 AAPPG------PPGPAAPPAPSPAAPVRTRRR--------RKLYELH-------AAGAPP 756

Query: 86  SPPGGVSSLPRSQRDDLSLHSEEGPALEPVSRP 118
            PP G +  P S R      S  GP L P   P
Sbjct: 757 PPPPGHAPAPESPRPGSG--SGSGPGLAPARSP 787


>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
          Length = 2220

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 31/107 (28%), Positives = 38/107 (35%), Gaps = 20/107 (18%)

Query: 16   RDELGPSFPMASPPGLELKTLSNG----PQAPRRSAPLGPVAPTREGVENACFSSEEHET 71
            R E  PS     P G EL  ++ G    PQ PR S P   +APT    E  C+       
Sbjct: 2001 RPEATPSMASLGPEGEELARVAEGTSFPPQEPRHS-PQVKMAPTSSPAEPHCW------- 2052

Query: 72   HFQNPGNTRLGSSPSP----PGGVSSLPRSQRDDLSLHSEEGPALEP 114
                P    LG+   P     G +   PR   +     SE  P   P
Sbjct: 2053 ----PAEAALGTGAEPTCSQEGKLRPEPRRDGEAQEAASETQPLSSP 2095


>gi|30039694 zinc finger protein 598 [Homo sapiens]
          Length = 904

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)

Query: 8   EFAAAKGPRDELGPSFP---MASPPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENA 62
           E AAA+GP D  GP          PG + +T +NGP +    +  GP AP   GV  A
Sbjct: 376 EEAAARGPEDPRGPRRSPRTQGEGPGPK-ETSTNGPVSQEAFSVTGPAAPGCVGVPGA 432


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,292,618
Number of Sequences: 37866
Number of extensions: 597727
Number of successful extensions: 2822
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 2759
Number of HSP's gapped (non-prelim): 181
length of query: 256
length of database: 18,247,518
effective HSP length: 100
effective length of query: 156
effective length of database: 14,460,918
effective search space: 2255903208
effective search space used: 2255903208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.