Search of human proteins with 8922511

Search of human proteins with 8922511

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922511 mitochondrial ribosomal protein S18A [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922511 mitochondrial ribosomal protein S18A [Homo sapiens]        418   e-117
gi|7662645 mitochondrial ribosomal protein S18B [Homo sapiens]         45   4e-05
gi|239757822 PREDICTED: similar to mitochondrial ribosomal prote...    44   9e-05
gi|169216268 PREDICTED: similar to mitochondrial ribosomal prote...    44   9e-05
gi|239746839 PREDICTED: hypothetical protein XP_002344238 [Homo ...    44   9e-05
gi|7705630 mitochondrial ribosomal protein S18C [Homo sapiens]         44   1e-04
gi|16418441 terminal deoxynucleotidyltransferase interacting fac...    37   0.014
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     32   0.45 
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     32   0.45 
gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa...    30   1.3  
gi|6912458 calcineurin binding protein 1 [Homo sapiens]                30   1.7  
gi|47059046 dachsous 2 isoform 1 [Homo sapiens]                        29   2.9  
gi|48255962 hypothetical protein LOC146723 [Homo sapiens]              29   2.9  
gi|24432058 aminopeptidase O [Homo sapiens]                            29   2.9  
gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]    28   3.8  
gi|226958547 Fc receptor-like 1 isoform 2 precursor [Homo sapiens]     28   5.0  
gi|68348711 tumor necrosis factor receptor superfamily, member 8...    28   5.0  
gi|239755663 PREDICTED: hypothetical protein [Homo sapiens]            28   5.0  
gi|239750171 PREDICTED: hypothetical protein XP_002347313 [Homo ...    28   5.0  
gi|239744482 PREDICTED: hypothetical protein XP_002343162 [Homo ...    28   5.0  
gi|215820619 zinc finger protein 646 [Homo sapiens]                    28   5.0  
gi|109134351 zinc finger and BTB domain containing 44 [Homo sapi...    28   5.0  
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho...    28   6.5  
gi|239741359 PREDICTED: hypothetical protein XP_002342184 [Homo ...    28   6.5  
gi|114431236 zinc finger protein 462 [Homo sapiens]                    28   6.5  
gi|113205091 BAI1-associated protein 2-like 2 [Homo sapiens]           28   6.5  
gi|253795481 plexin B3 isoform 2 [Homo sapiens]                        27   8.5  
gi|29336063 plexin B3 isoform 1 [Homo sapiens]                         27   8.5  
gi|143770755 glycoprotein VI (platelet) isoform 2 [Homo sapiens]       27   8.5  
gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]             27   8.5  

>gi|8922511 mitochondrial ribosomal protein S18A [Homo sapiens]
          Length = 196

 Score =  418 bits (1074), Expect = e-117
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MAALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKES 60
           MAALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKES
Sbjct: 1   MAALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKES 60

Query: 61  PNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVK 120
           PNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVK
Sbjct: 61  PNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVK 120

Query: 121 MAHRAGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPL 180
           MAHRAGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPL
Sbjct: 121 MAHRAGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPL 180

Query: 181 LRDNVCYSRTPWKLYH 196
           LRDNVCYSRTPWKLYH
Sbjct: 181 LRDNVCYSRTPWKLYH 196


>gi|7662645 mitochondrial ribosomal protein S18B [Homo sapiens]
          Length = 258

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 70  CPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRKIEECVKMAHRAGLL 128
           CPICR +  H  ++ +V LL QF+  H G++     TG+C ++H+++ + ++ A   GLL
Sbjct: 105 CPICRDHKLH-VDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLL 163

Query: 129 PNHRPRL 135
             H P++
Sbjct: 164 IYHIPQV 170


>gi|239757822 PREDICTED: similar to mitochondrial ribosomal protein
           S18C [Homo sapiens]
          Length = 141

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)

Query: 56  TPKESPNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
           TP E+P   +   +C +C    KH  NY +  LLSQF+ P  G +  R +TGLC ++ ++
Sbjct: 51  TPMENPYKESLK-KCVLCG---KH-VNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKKQKE 105

Query: 115 IEECVKMAHRAGLLP 129
           I + +K A   G +P
Sbjct: 106 ITKAIKRAQIMGFMP 120


>gi|169216268 PREDICTED: similar to mitochondrial ribosomal protein
           S18C [Homo sapiens]
          Length = 141

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)

Query: 56  TPKESPNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
           TP E+P   +   +C +C    KH  NY +  LLSQF+ P  G +  R +TGLC ++ ++
Sbjct: 51  TPMENPYKESLK-KCVLCG---KH-VNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKKQKE 105

Query: 115 IEECVKMAHRAGLLP 129
           I + +K A   G +P
Sbjct: 106 ITKAIKRAQIMGFMP 120


>gi|239746839 PREDICTED: hypothetical protein XP_002344238 [Homo
           sapiens]
          Length = 141

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)

Query: 56  TPKESPNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHRK 114
           TP E+P   +   +C +C    KH  NY +  LLSQF+ P  G +  R +TGLC ++ ++
Sbjct: 51  TPMENPYKESLK-KCVLCG---KH-VNYKNAQLLSQFVSPFTGCIYGRHVTGLCGKKQKE 105

Query: 115 IEECVKMAHRAGLLP 129
           I + +K A   G +P
Sbjct: 106 ITKAIKRAQIMGFMP 120


>gi|7705630 mitochondrial ribosomal protein S18C [Homo sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%)

Query: 1   MAALKALVSGCGRLLRGLLAGPAAT-----SWSRLPARGFREVVETQEGKTTIIEGRITA 55
           MAA+ A+  G GR     L   A +     + + L  RG  + V + E            
Sbjct: 1   MAAVVAVCGGLGRKKLTHLVTAAVSLTHPGTHTVLWRRGCSQQVSSNED----------- 49

Query: 56  TPKESPNP-PNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGML-PRKITGLCQEEHR 113
            P    NP   P  +C +C    KH  +Y +V LLSQF+ P  G +  R ITGLC ++ +
Sbjct: 50  LPISMENPYKEPLKKCILCG---KH-VDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQK 105

Query: 114 KIEECVKMAHRAGLLP 129
           +I + +K A   G +P
Sbjct: 106 EITKAIKRAQIMGFMP 121


>gi|16418441 terminal deoxynucleotidyltransferase interacting factor
           1 [Homo sapiens]
          Length = 329

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 116 EECVKMAHRAGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRM 174
           EEC   AHR   LP  R   P G +  S       +  W P S +PI ++GP+W+  R+
Sbjct: 154 EEC---AHRGSPLPKKRKGRPPGHILSSDRAAAGMV--WKPKSCEPIRREGPKWDPARL 207


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 18/64 (28%), Positives = 24/64 (37%)

Query: 133 PRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPLLRDNVCYSRTPW 192
           PR P     +  P  +R+ +    G V P       W R R P    L R     SR+P+
Sbjct: 356 PRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPY 415

Query: 193 KLYH 196
              H
Sbjct: 416 SSRH 419


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 18/64 (28%), Positives = 24/64 (37%)

Query: 133 PRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPLLRDNVCYSRTPW 192
           PR P     +  P  +R+ +    G V P       W R R P    L R     SR+P+
Sbjct: 356 PRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPY 415

Query: 193 KLYH 196
              H
Sbjct: 416 SSRH 419


>gi|46370073 GRB2-associated binding protein 1 isoform b [Homo
           sapiens]
          Length = 694

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 9/59 (15%)

Query: 129 PNHRPRLPEGVVPKSKPQLNRYL-----TRWAPGSVKPIYKKGPRWNRVRMPVGSPLLR 182
           P   PR P  V     P ++R L      + AP  +KP+    P W  ++ PV SP+ R
Sbjct: 501 PKTPPRRPVPVADCEPPPVDRNLKPDRKVKPAPLEIKPL----PEWEELQAPVRSPITR 555


>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
          Length = 2220

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 148 NRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPLLRD 183
           +++L RW PG  + +      W R    + +PLLRD
Sbjct: 497 HKFLVRWPPGLAEVVLSVYHSWRRHSTSLPNPLLRD 532


>gi|47059046 dachsous 2 isoform 1 [Homo sapiens]
          Length = 2916

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 123  HRAGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKG 166
            H    +P H   LPEG+ P   P L+  L    P ++ P+ ++G
Sbjct: 2853 HPRSPIPYHLGSLPEGMTPNFSPSLS--LLTMQPPALSPLLREG 2894


>gi|48255962 hypothetical protein LOC146723 [Homo sapiens]
          Length = 243

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 135 LPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPRWNRVRMPVGSPLLRDNVC 186
           LPE     S  Q   +    AP ++    +K  RW +   PV SPLL D+ C
Sbjct: 14  LPENRASLSPSQPLSFQCLKAPATLTWEDEKQQRWGQPHGPVSSPLLGDHRC 65


>gi|24432058 aminopeptidase O [Homo sapiens]
          Length = 720

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 76  NLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEE-HRKIEECVKMAHRAGLLPNHRPR 134
           ++++   + +    +Q I PH    P  +TG CQE   R I  C+  AH   L  +   R
Sbjct: 380 HMEYPCRFQNASATTQEIIPHRVFAPVCLTGACQETLLRLIPPCLSAAHSV-LGAHPFSR 438

Query: 135 LPEGVVPKSKPQL 147
           L   +VP + P L
Sbjct: 439 LDVLIVPANFPSL 451


>gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]
          Length = 511

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 31  PARGFREVVETQEGKTTIIEGRITATPKESPNPPNPSGQCPICRWNLKHKYNYDDVLLLS 90
           P+    EV       TT   G    TP  +P    P+ +C  CR     + NY   + + 
Sbjct: 370 PSTQLGEVPAPSAAPTTAPSG----TPARTPGAEPPTYECSHCRKTFSSRKNYTKHMFIH 425

Query: 91  QFIRPH 96
              +PH
Sbjct: 426 SGEKPH 431


>gi|226958547 Fc receptor-like 1 isoform 2 precursor [Homo sapiens]
          Length = 366

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 134 RLPEGVVPKSKPQLNRYLTRWAPGSVKPIYKKGPR 168
           R P   +P   PQ   YL    PG ++PIY+  PR
Sbjct: 301 RDPLRSLPSPLPQEFTYLNSPTPGQLQPIYENEPR 335


>gi|68348711 tumor necrosis factor receptor superfamily, member 8
           isoform 1 precursor [Homo sapiens]
          Length = 595

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 22  PAATSWSRLPARGFREVVETQEGKTTIIE------GRITATPKESPNPPNPSGQCPICRW 75
           PA +S S +P RG   + +    K T         GR ++ P  SP  P P G    CR 
Sbjct: 184 PATSSASTMPVRGGTRLAQEAASKLTRAPDSPSSVGRPSSDPGLSPTQPCPEGSGD-CRK 242

Query: 76  NLKHKYNYDD 85
             +  Y  D+
Sbjct: 243 QCEPDYYLDE 252


>gi|239755663 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 117

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 2   AALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESP 61
           AAL+  ++G G L        A  S SR+      E   T  G   +I  +I      SP
Sbjct: 49  AALQGPLAGFGSLRPRTRLHTAVASLSRVGCS--TEGANTSRGLCQVITKQIPGDFLSSP 106

Query: 62  NPPNPSGQCPI 72
            PP   GQCP+
Sbjct: 107 RPP---GQCPL 114


>gi|239750171 PREDICTED: hypothetical protein XP_002347313 [Homo
           sapiens]
          Length = 117

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 2   AALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESP 61
           AAL+  ++G G L        A  S SR+      E   T  G   +I  +I      SP
Sbjct: 49  AALQGPLAGFGSLRPRTRLHTAVASLSRVGCS--TEGANTSRGLCQVITKQIPGDFLSSP 106

Query: 62  NPPNPSGQCPI 72
            PP   GQCP+
Sbjct: 107 RPP---GQCPL 114


>gi|239744482 PREDICTED: hypothetical protein XP_002343162 [Homo
           sapiens]
          Length = 117

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 2   AALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESP 61
           AAL+  ++G G L        A  S SR+      E   T  G   +I  +I      SP
Sbjct: 49  AALQGPLAGFGSLRPRTRLHTAVASLSRVGCS--TEGANTSRGLCQVITKQIPGDFLSSP 106

Query: 62  NPPNPSGQCPI 72
            PP   GQCP+
Sbjct: 107 RPP---GQCPL 114


>gi|215820619 zinc finger protein 646 [Homo sapiens]
          Length = 1832

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 12/120 (10%)

Query: 23  AATSWSRLPARGFREVVETQEGKTTIIEGRITATPK-ESPNPPNPSGQCPICRWNLKHKY 81
           A+ +W  LP R  RE + +  G     +G   +T    +P  P P+         L +  
Sbjct: 159 ASGTWEDLPTRQ-REGLASHPGPEDGADGWGPSTNSARAPPLPIPASSL------LSNLE 211

Query: 82  NYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGLLPNHRPRLPEGVVP 141
            Y    L    +   GG  P +     +E   K  +C K    AG L NHR     G+ P
Sbjct: 212 QY----LAESVVNFTGGQEPTQSPPAEEERRYKCSQCGKTYKHAGSLTNHRQSHTLGIYP 267


>gi|109134351 zinc finger and BTB domain containing 44 [Homo
           sapiens]
          Length = 453

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 54  TATPKESPNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRP 95
           ++T + SPN P+   QCP C        N    +L+   I+P
Sbjct: 385 SSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKP 426


>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
            sapiens]
          Length = 1570

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 22   PAATSWSRLPARGFREVVETQEGKTTIIEGRIT-ATPKESPNPPNPS 67
            P A S    P    R V+E  E +TT+   R   A+PK SP P  PS
Sbjct: 1465 PLAPSVPEAPRGRERWVLEVVEERTTLSGPRSKPASPKLSPEPQTPS 1511


>gi|239741359 PREDICTED: hypothetical protein XP_002342184 [Homo
          sapiens]
          Length = 168

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 14 LLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESPNPPNPS 67
          +LRG L  PAA   S  P R    ++    G  +  EG +  +P E+P PP P+
Sbjct: 10 VLRGQLMPPAA---SPSPRRWLSPLLGFANGSGS--EGHLCISPPEAPPPPLPA 58


>gi|114431236 zinc finger protein 462 [Homo sapiens]
          Length = 2506

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 46   TTIIEGRITATPKESPNPPNPSGQCPICRWNLKHKYNYDDVLLL 89
            T  +E   +A P+E P       +CP+C ++ K+K N  D ++L
Sbjct: 2236 TMHVEAGHSAVPEEGPKDL----RCPLCLYHTKYKRNMIDHIVL 2275


>gi|113205091 BAI1-associated protein 2-like 2 [Homo sapiens]
          Length = 529

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 15  LRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESPNPPNPSGQCPICR 74
           L G L G +A+ W   P    + + E      T +    + T      P NP  + P   
Sbjct: 364 LYGKLEGSSASGW--FPEAYVKALEEGPVNPMTPVTPMTSMTSMSPMTPMNPGNELPSRS 421

Query: 75  WNLKHKYNYDDVL 87
           + L+  ++ DD+L
Sbjct: 422 YPLRGSHSLDDLL 434


>gi|253795481 plexin B3 isoform 2 [Homo sapiens]
          Length = 1932

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 116 EECVKMAHRAGLLPNHRPRLPEGVVPKSKPQL 147
           EE     H   LLP H PR  +G V  S P+L
Sbjct: 543 EEDSHCLHIQSLLPGHHPRQEQGQVTLSVPRL 574


>gi|29336063 plexin B3 isoform 1 [Homo sapiens]
          Length = 1909

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 116 EECVKMAHRAGLLPNHRPRLPEGVVPKSKPQL 147
           EE     H   LLP H PR  +G V  S P+L
Sbjct: 520 EEDSHCLHIQSLLPGHHPRQEQGQVTLSVPRL 551


>gi|143770755 glycoprotein VI (platelet) isoform 2 [Homo sapiens]
          Length = 339

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 41  TQEGKTTIIEGRITATPKESPNPPNPSGQ 69
           T E  TT     ITA+PKES +P  P+ Q
Sbjct: 235 TNEVFTTETSRSITASPKESDSPAGPARQ 263


>gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]
          Length = 740

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 14/65 (21%)

Query: 8   VSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESPNPPNPS 67
           +S     L   L GP  TSW        R +   Q G+      R  ATP ++PNP    
Sbjct: 471 ISAASTPLASKLLGPFPTSWD-------RSISSPQPGQ------RTHATP-QAPNPSLSE 516

Query: 68  GQCPI 72
           G+ P+
Sbjct: 517 GEIPV 521


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,628,275
Number of Sequences: 37866
Number of extensions: 497701
Number of successful extensions: 1532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 34
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.