LOC100133779 9120

Name: LOC100133779	Sequence: fasta or formatted (141aa)		NCBI GI: 169216268
Description: PREDICTED: similar to mitochondrial ribosomal protein S18C		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 7 2 C cysteine 4.3 6 1 D aspartate 2.1 3 1 E glutamate 3.5 5 1 F phenylalanine 2.1 3 1 G glycine 7.8 11 2 H histidine 2.8 4 1 I isoleucine 4.3 6 1 K lysine 11.3 16 2 L leucine 8.5 12 2 M methionine 3.5 5 1 N asparagine 2.8 4 1 P proline 6.4 9 1 Q glutamine 5.0 7 1 R arginine 4.3 6 2 S serine 5.7 8 2 T threonine 6.4 9 1 V valine 8.5 12 1 W tryptophan 0.0 0 0 Y tyrosine 5.7 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to mitochondrial ribosomal prote... LOC100288560 1.000 PREDICTED: hypothetical protein XP_002344238 LOC100294048 0.993 PREDICTED: similar to mitochondrial ribosomal prote... MRPS18C 0.854 mitochondrial ribosomal protein S18C MRPS18B 0.086 mitochondrial ribosomal protein S18B MRPS18A 0.071 mitochondrial ribosomal protein S18A SSH2 0.034 slingshot 2 ZFP62 0.019 zinc finger protein 62 homolog TOPBP1 0.019 topoisomerase (DNA) II binding protein 1 LOC100127988 0.015 PREDICTED: hypothetical protein DPEP3 0.011 dipeptidase 3 isoform b DPEP3 0.011 dipeptidase 3 isoform a TCN1 0.011 transcobalamin I precursor CRYZL1 0.011 crystallin, zeta-like 1 TBC1D4 0.007 TBC1 domain family, member 4 SMARCC2 0.007 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.007 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.007 SWI/SNF-related matrix-associated actin-dependent r... LOC100290806 0.007 PREDICTED: hypothetical protein XP_002348069 ARID1A 0.007 AT rich interactive domain 1A isoform b PAPOLA 0.007 poly(A) polymerase alpha SV2A 0.004 synaptic vesicle glycoprotein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.