Guide to the Human Genome
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Name: CDCA8 Sequence: fasta or formatted (280aa) NCBI GI: 8922438
Description:

cell division cycle associated 8

Referenced in:

Additional Cell Cycle Functions
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         22           2
 C cysteine            0.7          2           1
 D aspartate           4.3         12           1
 E glutamate           8.6         24           7
 F phenylalanine       2.1          6           1
 G glycine             5.7         16           3
 H histidine           0.7          2           1
 I isoleucine          6.4         18           1
 K lysine              8.9         25           2
 L leucine            10.4         29           2
 M methionine          1.4          4           1
 N asparagine          5.0         14           1
 P proline             5.0         14           2
 Q glutamine           3.9         11           1
 R arginine            9.3         26           3
 S serine              7.5         21           2
 T threonine           5.7         16           1
 V valine              5.0         14           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle associated 8 
CHD8                  0.037   chromodomain helicase DNA binding protein 8 
CTTN                  0.029   cortactin isoform a 
CTTN                  0.029   cortactin isoform b 
CCHCR1                0.023   coiled-coil alpha-helical rod protein 1 isoform 1 [...
CCHCR1                0.023   coiled-coil alpha-helical rod protein 1 isoform 2 [...
CCHCR1                0.023   coiled-coil alpha-helical rod protein 1 isoform 3 [...
BDP1                  0.023   transcription factor-like nuclear regulator 
CEP135                0.019   centrosome protein 4 
CGNL1                 0.019   cingulin-like 1 
LOC65998              0.017   hypothetical protein LOC65998 
MYH10                 0.017   myosin, heavy polypeptide 10, non-muscle 
SMARCA2               0.015   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.015   SWI/SNF-related matrix-associated actin-dependent re...
TRIM55                0.015   tripartite motif-containing 55 isoform 3 
ITSN1                 0.014   intersectin 1 isoform ITSN-s 
ITSN1                 0.014   intersectin 1 isoform ITSN-l 
MYH7B                 0.014   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
INVS                  0.014   inversin isoform a 
INVS                  0.014   inversin isoform b 
PWP2                  0.014   PWP2 periodic tryptophan protein homolog 
LOC100294088          0.014   PREDICTED: hypothetical protein, partial 
PLEKHG5               0.014   pleckstrin homology domain containing family G membe...
PLEKHG5               0.014   pleckstrin homology domain containing family G memb...
PLEKHG5               0.014   pleckstrin homology domain containing family G memb...
PLEKHG5               0.014   pleckstrin homology domain containing family G memb...
PLEKHG5               0.014   pleckstrin homology domain containing family G memb...
CYTSA                 0.014   cytospin A 
CYTSA                 0.014   cytospin A 
GBP1                  0.014   guanylate binding protein 1, interferon-inducible, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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