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Search of human proteins with 88999586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88999586 cell division cycle associated 7 isoform 1 [Homo
sapiens]
(450 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88999586 cell division cycle associated 7 isoform 1 [Homo sap... 926 0.0
gi|22027514 cell division cycle associated 7 isoform 2 [Homo sap... 670 0.0
gi|31542537 cell division cycle associated 7-like isoform 1 [Hom... 306 3e-83
gi|188497635 cell division cycle associated 7-like isoform 2 [Ho... 305 6e-83
gi|188497637 cell division cycle associated 7-like isoform 3 [Ho... 292 4e-79
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens] 39 0.010
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 39 0.013
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 39 0.013
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 36 0.081
gi|150170670 piccolo isoform 2 [Homo sapiens] 36 0.081
gi|150378539 piccolo isoform 1 [Homo sapiens] 36 0.081
gi|21687119 spermatogenesis associated 18 homolog [Homo sapiens] 35 0.11
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 35 0.11
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 35 0.14
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 35 0.18
gi|126116565 MYC binding protein 2 [Homo sapiens] 34 0.31
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 33 0.40
gi|163644316 hypothetical protein LOC23255 [Homo sapiens] 33 0.40
gi|94400925 synaptonemal complex protein 2-like [Homo sapiens] 33 0.40
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 33 0.53
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 33 0.53
gi|46399200 testis-specific bromodomain protein [Homo sapiens] 33 0.53
gi|46399198 testis-specific bromodomain protein [Homo sapiens] 33 0.53
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 0.53
gi|116875765 tight junction protein 1 isoform b [Homo sapiens] 33 0.69
gi|116875767 tight junction protein 1 isoform a [Homo sapiens] 33 0.69
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 33 0.69
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 33 0.69
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 33 0.69
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 33 0.69
>gi|88999586 cell division cycle associated 7 isoform 1 [Homo
sapiens]
Length = 450
Score = 926 bits (2393), Expect = 0.0
Identities = 450/450 (100%), Positives = 450/450 (100%)
Query: 1 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTKPKFRSDISEE 60
MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTKPKFRSDISEE
Sbjct: 1 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTKPKFRSDISEE 60
Query: 61 LANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFS 120
LANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFS
Sbjct: 61 LANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFS 120
Query: 121 ESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTD 180
ESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTD
Sbjct: 121 ESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTD 180
Query: 181 SNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRR 240
SNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRR
Sbjct: 181 SNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRR 240
Query: 241 RTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNED 300
RTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNED
Sbjct: 241 RTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNED 300
Query: 301 DLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTK 360
DLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTK
Sbjct: 301 DLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTK 360
Query: 361 TNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCAT 420
TNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCAT
Sbjct: 361 TNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCAT 420
Query: 421 GVLVYLAKYHGFGNVHAYLKSLKQEFEMQA 450
GVLVYLAKYHGFGNVHAYLKSLKQEFEMQA
Sbjct: 421 GVLVYLAKYHGFGNVHAYLKSLKQEFEMQA 450
>gi|22027514 cell division cycle associated 7 isoform 2 [Homo
sapiens]
Length = 371
Score = 670 bits (1729), Expect = 0.0
Identities = 326/342 (95%), Positives = 330/342 (96%), Gaps = 1/342 (0%)
Query: 109 ADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKA 168
+ S D+S F+ + RLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKA
Sbjct: 31 SSSSDDSCDSFASDNFAN-TRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKA 89
Query: 169 ESRQPSENSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPL 228
ESRQPSENSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPL
Sbjct: 90 ESRQPSENSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPL 149
Query: 229 PGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVR 288
PGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVR
Sbjct: 150 PGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVR 209
Query: 289 KRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGST 348
KRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGST
Sbjct: 210 KRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGST 269
Query: 349 CHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNC 408
CHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNC
Sbjct: 270 CHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNC 329
Query: 409 SFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA 450
SFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA
Sbjct: 330 SFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA 371
Score = 100 bits (249), Expect = 3e-21
Identities = 49/50 (98%), Positives = 50/50 (100%)
Query: 1 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTK 50
MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANT+
Sbjct: 1 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTR 50
>gi|31542537 cell division cycle associated 7-like isoform 1 [Homo
sapiens]
Length = 454
Score = 306 bits (783), Expect = 3e-83
Identities = 191/452 (42%), Positives = 259/452 (57%), Gaps = 67/452 (14%)
Query: 26 ISMETSSSSDDSCDSFAS-DNFANTKPKFRSD-ISEELANVFYEDSDNES--FCGFSESE 81
+ MET SS ++SCDSF S ++ +F S +EEL +F ED+D+E+ F GF++S+
Sbjct: 33 VPMETLSS-EESCDSFDSLESGKQQDVRFHSKYFTEELRRIFIEDTDSETEDFAGFTQSD 91
Query: 82 VQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRS 141
+ K P+V + +D D+ E +D ++ R+R
Sbjct: 92 LNG---------KTNPEVM-----VVESDLSDDGKASLVSEEEEDEEEDKATPRRSRSR- 136
Query: 142 QCRHSGPLRVAMKFPARSTRGATNKKAESRQ-------------------------PSEN 176
R S LRVA +FP + +K + S Q E+
Sbjct: 137 --RSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKKDCRQVIQRED 194
Query: 177 SVTDSNSDSEDES--GMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQ 234
S ++S DS DES + L KR +NIK+NKAMLA+L++EL S P F R P S S+
Sbjct: 195 STSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVRTPT--SASR 252
Query: 235 SRRPRRRTFPGVASRR-NPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTV 293
+ RR G +RR NP R ARP + +L+ + + +++ R+RKT+
Sbjct: 253 KKTVRRAFSEGQITRRMNPTRSARPPEKF------ALENFTVSAAKFAEEFYSFRRRKTI 306
Query: 294 DGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCR 353
G E RR R S RPVE+ITEE+LENV R+KIY++ LG+TCHQCR
Sbjct: 307 GGKCRE----YRRRHRISS-----FRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCR 357
Query: 354 QKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQ 413
QKTIDTKT CRN C GVRGQFCGPCLRNRYGE+VR ALLDP+W CPPCRGICNCS+CR+
Sbjct: 358 QKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRK 417
Query: 414 RDGRCATGVLVYLAKYHGFGNVHAYLKSLKQE 445
RDGRCATG+L++LAK++G+ NV YL+SL++E
Sbjct: 418 RDGRCATGILIHLAKFYGYDNVKEYLESLQKE 449
Score = 30.0 bits (66), Expect = 4.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 96 RPDVTNELAGIFHADSDDESFCGFSE 121
R + E+A IF+A SDDE F GF +
Sbjct: 6 RYQIPKEVADIFNAPSDDEEFVGFRD 31
>gi|188497635 cell division cycle associated 7-like isoform 2 [Homo
sapiens]
Length = 420
Score = 305 bits (781), Expect = 6e-83
Identities = 191/450 (42%), Positives = 258/450 (57%), Gaps = 67/450 (14%)
Query: 28 METSSSSDDSCDSFAS-DNFANTKPKFRSD-ISEELANVFYEDSDNES--FCGFSESEVQ 83
MET SS ++SCDSF S ++ +F S +EEL +F ED+D+E+ F GF++S++
Sbjct: 1 METLSS-EESCDSFDSLESGKQQDVRFHSKYFTEELRRIFIEDTDSETEDFAGFTQSDLN 59
Query: 84 DVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQC 143
K P+V + +D D+ E +D ++ R+R
Sbjct: 60 G---------KTNPEVM-----VVESDLSDDGKASLVSEEEEDEEEDKATPRRSRSR--- 102
Query: 144 RHSGPLRVAMKFPARSTRGATNKKAESRQ-------------------------PSENSV 178
R S LRVA +FP + +K + S Q E+S
Sbjct: 103 RSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKKDCRQVIQREDST 162
Query: 179 TDSNSDSEDES--GMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSR 236
++S DS DES + L KR +NIK+NKAMLA+L++EL S P F R P S S+ +
Sbjct: 163 SESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVRTPT--SASRKK 220
Query: 237 RPRRRTFPGVASRR-NPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDG 295
RR G +RR NP R ARP + +L+ + + +++ R+RKT+ G
Sbjct: 221 TVRRAFSEGQITRRMNPTRSARPPEKF------ALENFTVSAAKFAEEFYSFRRRKTIGG 274
Query: 296 YMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQK 355
E RR R S RPVE+ITEE+LENV R+KIY++ LG+TCHQCRQK
Sbjct: 275 KCRE----YRRRHRISS-----FRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQK 325
Query: 356 TIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRD 415
TIDTKT CRN C GVRGQFCGPCLRNRYGE+VR ALLDP+W CPPCRGICNCS+CR+RD
Sbjct: 326 TIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRD 385
Query: 416 GRCATGVLVYLAKYHGFGNVHAYLKSLKQE 445
GRCATG+L++LAK++G+ NV YL+SL++E
Sbjct: 386 GRCATGILIHLAKFYGYDNVKEYLESLQKE 415
>gi|188497637 cell division cycle associated 7-like isoform 3 [Homo
sapiens]
Length = 408
Score = 292 bits (748), Expect = 4e-79
Identities = 183/426 (42%), Positives = 243/426 (57%), Gaps = 62/426 (14%)
Query: 54 RSDISEELANVFYEDSDNESFCGFSESEVQDVL------DHCGFLQKPRPDVTNELAGIF 107
R I +E+A++F SD+E F GF + + L D L+ + V ++L
Sbjct: 6 RYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQVVESDL---- 61
Query: 108 HADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKK 167
SDD SE E + + R R+RS+ R S LRVA +FP + +K
Sbjct: 62 ---SDDGKASLVSEEEEDEEEDKATPR---RSRSR-RSSIGLRVAFQFPTKKLANKPDKN 114
Query: 168 AESRQ-------------------------PSENSVTDSNSDSEDES--GMNFLEKRALN 200
+ S Q E+S ++S DS DES + L KR +N
Sbjct: 115 SSSEQLFSSARLQNEKKTILERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMN 174
Query: 201 IKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRR-NPERRARPL 259
IK+NKAMLA+L++EL S P F R P S S+ + RR G +RR NP R ARP
Sbjct: 175 IKENKAMLAQLLAELNSMPDFFPVRTPT--SASRKKTVRRAFSEGQITRRMNPTRSARPP 232
Query: 260 TRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIR 319
+ +L+ + + +++ R+RKT+ G E RR R S R
Sbjct: 233 EKF------ALENFTVSAAKFAEEFYSFRRRKTIGGKCRE----YRRRHRISS-----FR 277
Query: 320 PVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPC 379
PVE+ITEE+LENV R+KIY++ LG+TCHQCRQKTIDTKT CRN C GVRGQFCGPC
Sbjct: 278 PVEDITEEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPC 337
Query: 380 LRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYL 439
LRNRYGE+VR ALLDP+W CPPCRGICNCS+CR+RDGRCATG+L++LAK++G+ NV YL
Sbjct: 338 LRNRYGEDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCATGILIHLAKFYGYDNVKEYL 397
Query: 440 KSLKQE 445
+SL++E
Sbjct: 398 ESLQKE 403
>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
Length = 532
Score = 38.9 bits (89), Expect = 0.010
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 130 LQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDES 189
+Q+ + G R R + R + + A +K S S ++ + S+SD ED+S
Sbjct: 67 VQNRKRGKRPRGRPRKLTAMSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSSSDEEDDS 126
Query: 190 GMNFLE----KRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRP 238
++ + + Q KA + EL+ RGR PLP +RRP
Sbjct: 127 DLDAKRGPRGRETHPVPQKKAQILVAKPELKDPIRKKRGRKPLPPEQKATRRP 179
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 38.5 bits (88), Expect = 0.013
Identities = 77/367 (20%), Positives = 134/367 (36%), Gaps = 53/367 (14%)
Query: 4 RRVPQKDLRVKKNLKKFRYVKLISMETSSS--SDDSCDSFASDNFANTKPKF-------- 53
+R+ + +LR ++NL R K I +SSS + S D+ ++K K
Sbjct: 1089 KRLKRIELRERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKR 1148
Query: 54 ----------RSDISEELANVFYEDSDNESFCGFS-ESEVQDVLD------HCGFLQKPR 96
++DI+ ++ +D N G S E +++ V + H GF Q
Sbjct: 1149 NSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSG 1208
Query: 97 PDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFP 156
+ ++ + D DD++ E+ I M L+ ++ + K
Sbjct: 1209 DEALSKSVPVTVDDDDDDN---DPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKK-- 1263
Query: 157 ARSTRGATNKKAESRQPSENSV-TDSNSDSEDESGMNF---LEKRALNIKQNKAMLAKLM 212
G N++ + ++N V ++S+SDSE+ + L + L + ++ K
Sbjct: 1264 ---RTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKT 1320
Query: 213 SELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDA 272
E R R + DS+ + S E+ RP TRS A
Sbjct: 1321 KPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQ--RPRTRS---------A 1369
Query: 273 LPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENV 332
E EE + Y +KR+ + ++D +S S EE EEE E
Sbjct: 1370 KKAELEENQRSYKQKKKRRRI---KVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEE 1426
Query: 333 CSNSREK 339
N K
Sbjct: 1427 DENDDSK 1433
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 38.5 bits (88), Expect = 0.013
Identities = 77/367 (20%), Positives = 134/367 (36%), Gaps = 53/367 (14%)
Query: 4 RRVPQKDLRVKKNLKKFRYVKLISMETSSS--SDDSCDSFASDNFANTKPKF-------- 53
+R+ + +LR ++NL R K I +SSS + S D+ ++K K
Sbjct: 1127 KRLKRIELRERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKEKKR 1186
Query: 54 ----------RSDISEELANVFYEDSDNESFCGFS-ESEVQDVLD------HCGFLQKPR 96
++DI+ ++ +D N G S E +++ V + H GF Q
Sbjct: 1187 NSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSG 1246
Query: 97 PDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFP 156
+ ++ + D DD++ E+ I M L+ ++ + K
Sbjct: 1247 DEALSKSVPVTVDDDDDDN---DPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKK-- 1301
Query: 157 ARSTRGATNKKAESRQPSENSV-TDSNSDSEDESGMNF---LEKRALNIKQNKAMLAKLM 212
G N++ + ++N V ++S+SDSE+ + L + L + ++ K
Sbjct: 1302 ---RTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKT 1358
Query: 213 SELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDA 272
E R R + DS+ + S E+ RP TRS A
Sbjct: 1359 KPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQ--RPRTRS---------A 1407
Query: 273 LPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENV 332
E EE + Y +KR+ + ++D +S S EE EEE E
Sbjct: 1408 KKAELEENQRSYKQKKKRRRI---KVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEE 1464
Query: 333 CSNSREK 339
N K
Sbjct: 1465 DENDDSK 1471
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 35.8 bits (81), Expect = 0.081
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 16/173 (9%)
Query: 121 ESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTD 180
ESE S + C R + S P+R + + ++ + + E + ENS D
Sbjct: 1128 ESEEDPPSNDDSDTDFCSRRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENS-RD 1186
Query: 181 SNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRR 240
S SD D+ +F+E R ++N+ + ES G + RR +
Sbjct: 1187 SESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSES-----DGSQKSLRRGKEIRRVHK 1241
Query: 241 RTFPGVASR-----RNPE-----RRARPLTRSRSRILGSLDALPMEEEEEEDK 283
R S +N E + ++ R R R EEEEEE K
Sbjct: 1242 RRLSSSESEESYLSKNSEDDELAKESKRSVRKRGRSTDEYSEADEEEEEEEGK 1294
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 27/238 (11%)
Query: 101 NELAGIFHA--DSDDESF-----CGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAM 153
+E AG H+ D DDE+F + E++ Q+ L G R + +A
Sbjct: 1620 DEDAGRRHSWHDEDDEAFDESPELKYRETKSQESEELVVTGGGGLRRFKTIELNST-IAD 1678
Query: 154 KFPARSTRGATNKKAESRQPSE-NSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLM 212
K+ A S++ T+ + E S+TDS D G + L + + ++ L
Sbjct: 1679 KYSAESSQKKTSLYFDEEPELEMESLTDSPEDRSRGEGSSSLHASSFTPGTSPTSVSSLD 1738
Query: 213 SELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTR--SRSRILGSL 270
+ +S P +G Q R+ R R P P S L
Sbjct: 1739 EDSDSSPSHKKGE------SKQQRKARHR----------PHGPLLPTIEDSSEEEELREE 1782
Query: 271 DALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEE 328
+ L E+E++ + RK + ++D+L RR T P + P+E+ + E
Sbjct: 1783 EELLKEQEKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPIEDASPTE 1840
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 35.8 bits (81), Expect = 0.081
Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 27/238 (11%)
Query: 101 NELAGIFHA--DSDDESF-----CGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAM 153
+E AG H+ D DDE+F + E++ Q+ L G R + +A
Sbjct: 1620 DEDAGRRHSWHDEDDEAFDESPELKYRETKSQESEELVVTGGGGLRRFKTIELNST-IAD 1678
Query: 154 KFPARSTRGATNKKAESRQPSE-NSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLM 212
K+ A S++ T+ + E S+TDS D G + L + + ++ L
Sbjct: 1679 KYSAESSQKKTSLYFDEEPELEMESLTDSPEDRSRGEGSSSLHASSFTPGTSPTSVSSLD 1738
Query: 213 SELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTR--SRSRILGSL 270
+ +S P +G Q R+ R R P P S L
Sbjct: 1739 EDSDSSPSHKKGE------SKQQRKARHR----------PHGPLLPTIEDSSEEEELREE 1782
Query: 271 DALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEE 328
+ L E+E++ + RK + ++D+L RR T P + P+E+ + E
Sbjct: 1783 EELLKEQEKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPIEDASPTE 1840
>gi|21687119 spermatogenesis associated 18 homolog [Homo sapiens]
Length = 538
Score = 35.4 bits (80), Expect = 0.11
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 169 ESRQPSENSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPL 228
E R+ + + N+D +D M+ +K+ N+K+ A+L+ S L+ R P
Sbjct: 204 EERKREQWNSLKQNADQQDTEAMSDYKKQLRNLKEEIAVLSAEKSALQGRSSRSRSPSPA 263
Query: 229 PGSDSQSRRPR---------RRTFPGVASRRNPERRARPLTR-SRSRILGSLDA 272
P S S SR RR P + N R+A L+R S S LDA
Sbjct: 264 PRSRSCSRSRSASPSTAVKVRRPSPNRSKLSNVARKAALLSRFSDSYSQARLDA 317
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 35.4 bits (80), Expect = 0.11
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 29/189 (15%)
Query: 161 RGATNKKAESRQPSENSVTDSNSDS-EDESGMNFLEKRALNIKQNKAMLAKLMSELESFP 219
R A KK + +Q + SNS S ED S + + +K+ K + E +
Sbjct: 98 RSAILKKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRKK-------HKDEDWQ 150
Query: 220 GSFRGRHPLPGSDSQSRRPRRRTFPGVASR----RNPERRARPLTRSRS----RILG--- 268
S G GSDS+S R ++ +N + +P RS+S +ILG
Sbjct: 151 MSGSGSPSQSGSDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRSKSKNGKKILGQKK 210
Query: 269 -SLDALPMEEEEEEDKY----MLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEE 323
+D+ EE+++E+ Y R++ TV+ ED+ ++ S L V +
Sbjct: 211 RQIDS--SEEDDDEEDYDNDKRSSRRQATVNVSYKEDE---EMKTDSDDLLEVCGEDVPQ 265
Query: 324 ITEEELENV 332
EEE E +
Sbjct: 266 PEEEEFETI 274
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 210 KLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPG-----VASRRNPERRARPLTRSRS 264
K + E+ P + + S+ RR R R + G ++ + P++R RP T R
Sbjct: 1062 KELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRE 1121
Query: 265 RILGSLDA 272
I G DA
Sbjct: 1122 NIKGFSDA 1129
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 35.0 bits (79), Expect = 0.14
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 139 TRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRA 198
++S+ R R K +RS + +KK +SR PS+ + S S S +S ++
Sbjct: 216 SKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEK-SRSRSHSAGKSRSKSKDQAE 274
Query: 199 LNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFP---GVASRRNPERR 255
I QN + K S S RH S S+SR RR G SR + +
Sbjct: 275 EKI-QNNDNVGKPKSRSPS-------RHK-SKSKSRSRSQERRVEEEKRGSVSRGRSQEK 325
Query: 256 ARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSR 309
+ +RSRSR G + + +DK RKR + +S RSR
Sbjct: 326 SLRQSRSRSRSKGGSRSRSRSRSKSKDK-RKGRKRSREESRSRSRSRSKSERSR 378
Score = 32.7 bits (73), Expect = 0.69
Identities = 55/231 (23%), Positives = 85/231 (36%), Gaps = 27/231 (11%)
Query: 134 REGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNF 193
R G R+RS+ R R K +R + +K+ SR S + D +E N
Sbjct: 223 RSGSRSRSKSRSRSQSRSRSK--KEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNN 280
Query: 194 ---------LEKRALNIKQNKAMLAKLMSELESFPGSFRGRHP---LPGSDSQSR----- 236
R + ++++ + E E RGR L S S+SR
Sbjct: 281 DNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGS 340
Query: 237 RPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGY 296
R R R+ +R +R+R +RSRSR + + + K +K+K D
Sbjct: 341 RSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKED-- 398
Query: 297 MNEDDLPRSRRSRSSVTLPHIIRPVEEITEE---ELENVCSNSREKIYNRS 344
D +SR SV+ E E E EN +N + +RS
Sbjct: 399 ---TDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRS 446
Score = 30.4 bits (67), Expect = 3.4
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 171 RQPSENSVTDSNSDSEDESGMNFLE----KRALNIKQNKAMLAKLMSELESFPGSFRGR- 225
RQ E + D++ ++E + F+ KRAL + + + +E PGS R R
Sbjct: 125 RQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRS 184
Query: 226 ------HPLPGSDSQ-SRRPRRRTFPGVASRRNPERRARPLTRSRSR 265
H S S+ SR+ R R+ +S R+R +RSRS+
Sbjct: 185 YSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSK 231
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 34.7 bits (78), Expect = 0.18
Identities = 55/242 (22%), Positives = 89/242 (36%), Gaps = 12/242 (4%)
Query: 38 CDSFASD-NFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPR 96
CDSF SD N + +P +D+ + N S+N E + + K
Sbjct: 721 CDSFCSDQNESEVEPSVNADLKQMNENSVTHCSENNMPSSDLADEKVETVSQPSESPKDT 780
Query: 97 PDVTNE---LAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHS---GPLR 150
D T + FH+ S S ++ Q+ R QS T + R S P
Sbjct: 781 IDKTKKPRTRRSRFHSPSTTWSP---NKDTPQEKKRPQSPSPRRETGKESRKSQSPSPKN 837
Query: 151 VAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMN-FLEKRALNIKQNKAMLA 209
+ + +S R + KK +R+ ++ D+ ES + L R ++NK
Sbjct: 838 ESARGRKKS-RSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQP 896
Query: 210 KLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGS 269
++ + R D Q R RRT SR + +R T+S+S G
Sbjct: 897 RVKDSSPGEKSRSQSRERESDRDGQRRERERRTRKWSRSRSHSRSPSRCRTKSKSSSFGR 956
Query: 270 LD 271
+D
Sbjct: 957 ID 958
>gi|126116565 MYC binding protein 2 [Homo sapiens]
Length = 4640
Score = 33.9 bits (76), Expect = 0.31
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 50/243 (20%)
Query: 152 AMKFPARSTRGATNKK----AESRQPSENSVTDSN-----SDSEDESGMNFLEKRALNIK 202
++K R +R ++K ES SE+ + S+ SDS S +
Sbjct: 2703 SLKPDGRMSRTTADQKKPRGTESLSASESLILKSDAAKLRSDSHSRS-----------LS 2751
Query: 203 QNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPR-----RRTFPGVASRRNPERRAR 257
N L L S+ P S R P PGS S +P+ R + G +S R+ +
Sbjct: 2752 PNHNTLQTLKSD-GRMPSSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDK 2810
Query: 258 PL-TRSRSRILGSLDALPMEEEEEEDKYML----VRKRK--TVDGYMNEDDLPR------ 304
L +S + + LD P E + D Y L +RK+K + P+
Sbjct: 2811 NLPQKSTAPVKTKLD--PPRERSKSDSYTLDPDTLRKKKMPLTEPLRGRSTSPKPKSVPK 2868
Query: 305 ----SRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQ-KTIDT 359
S S + PH+ V+E E+ VC++S K N STC + K++D
Sbjct: 2869 DSTDSPGSENRAPSPHV---VQENLHSEVVEVCTSSTLKT-NSLTDSTCDDSSEFKSVDE 2924
Query: 360 KTN 362
+N
Sbjct: 2925 GSN 2927
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 33.5 bits (75), Expect = 0.40
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 141 SQCRHSGPLRVAMKF--PARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRA 198
SQ R+ P R+A + P RS G+ ++ S S +S + ++SDS D S + + A
Sbjct: 248 SQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISSSSSTSSDSSDSSSSSSDDSPA 307
Query: 199 LNIKQN--KAMLAKLMSELE 216
+++ A ++L+S LE
Sbjct: 308 RSVQSAAVPAPTSQLLSSLE 327
>gi|163644316 hypothetical protein LOC23255 [Homo sapiens]
Length = 1586
Score = 33.5 bits (75), Expect = 0.40
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 48/289 (16%)
Query: 54 RSDISEELANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDD 113
R ISE V +N + S + D+ H G L+ P P DSD
Sbjct: 342 RLQISELSGKVLKLQHENHAL--LSNIQRCDLAAHLG-LRAPSP-----------RDSDA 387
Query: 114 ESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQP 173
ES G ES+ ++ Q REG G + + +++ + K +E+ +P
Sbjct: 388 ESDAGKKESDGEESRLPQPKREG--------PVGGESDSEEMFEKTSGFGSGKPSEASEP 439
Query: 174 SENSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESF--PGSFRGRHPLPGS 231
+ + DSE +L ++ + + +L+++ +SF RG PLPG
Sbjct: 440 CPTELLKAREDSE------YLVTLKHEAQRLERTVERLITDTDSFLHDAGLRGGAPLPGP 493
Query: 232 DSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRK 291
Q + G ++ P+ +LG+++A M+ ++E + L + +
Sbjct: 494 GLQGEEEQ-----GEGDQQEPQ------------LLGTINA-KMKAFKKELQAFLEQVNR 535
Query: 292 TVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKI 340
DG L S S+VT P+ + +E ++ S +E++
Sbjct: 536 IGDGLSPLPHLTESSSFLSTVTSVSRDSPIGNLGKELGPDLQSRLKEQL 584
>gi|94400925 synaptonemal complex protein 2-like [Homo sapiens]
Length = 812
Score = 33.5 bits (75), Expect = 0.40
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 91 FLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHSGPLR 150
F Q+P+ L + DS ++ ++ + ++ S R+ RTRS LR
Sbjct: 492 FPQQPKSHYRKHLFSESNQDSSTSEL-SWTSNQKKKSLKSYSSRKKTRTRSN------LR 544
Query: 151 VAMKFPARSTRGATNKKAESRQPSENSVTD-SNSDSEDESGMNFLEKRALNIKQNKAMLA 209
+ FP S G +A+ PSE + + +N+ S S F + A ++ A
Sbjct: 545 ILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDSAQKT 604
Query: 210 KL-----MSELESFPGS 221
+L +SEL S S
Sbjct: 605 ELQDPHSLSELSSLKHS 621
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 259 LTRSRSR-ILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHI 317
LTR R LG LD+LP E E+ +K + R + V D+PR+ + P
Sbjct: 208 LTRHSYRECLGRLDSLP--EHEDSEKAEMKRSTELV----LSPDMPRTTNESLLTSFPKS 261
Query: 318 IRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTK 360
+ V T + + S ++I S ST HQ + TIDTK
Sbjct: 262 VEHVSPDTAD------AESGKEI-RESCQSTVHQQDETTIDTK 297
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 259 LTRSRSR-ILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHI 317
LTR R LG LD+LP E E+ +K + R + V D+PR+ + P
Sbjct: 208 LTRHSYRECLGRLDSLP--EHEDSEKAEMKRSTELV----LSPDMPRTTNESLLTSFPKS 261
Query: 318 IRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTK 360
+ V T + + S ++I S ST HQ + TIDTK
Sbjct: 262 VEHVSPDTAD------AESGKEI-RESCQSTVHQQDETTIDTK 297
>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 33.1 bits (74), Expect = 0.53
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 166 KKAESRQPSENSVTDSNSDSEDESG---MNFLEKRALNIKQNKA---MLAKLMSELESFP 219
+K++ QP + SEDE MN+ EKR L++ NK L +++ ++S
Sbjct: 482 EKSKRNQPKKRKQQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSRE 541
Query: 220 GSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEE 279
S +P + + T + + R RPL +I+ S + L ++++
Sbjct: 542 PSLSNSNP-DEIEIDFETLKASTLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQ 600
Query: 280 EEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLP-HIIRPVEEITEEELENVCSNSRE 338
E +K +L V+ +N R R+++S T P + V ++E + S+ E
Sbjct: 601 ELEKRLL-----DVNNQLNS----RKRQTKSDKTQPSKAVENVSRLSESSSSSSSSSESE 651
>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 33.1 bits (74), Expect = 0.53
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 166 KKAESRQPSENSVTDSNSDSEDESG---MNFLEKRALNIKQNKA---MLAKLMSELESFP 219
+K++ QP + SEDE MN+ EKR L++ NK L +++ ++S
Sbjct: 482 EKSKRNQPKKRKQQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSRE 541
Query: 220 GSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEE 279
S +P + + T + + R RPL +I+ S + L ++++
Sbjct: 542 PSLSNSNP-DEIEIDFETLKASTLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQ 600
Query: 280 EEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLP-HIIRPVEEITEEELENVCSNSRE 338
E +K +L V+ +N R R+++S T P + V ++E + S+ E
Sbjct: 601 ELEKRLL-----DVNNQLNS----RKRQTKSDKTQPSKAVENVSRLSESSSSSSSSSESE 651
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.1 bits (74), Expect = 0.53
Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 31/199 (15%)
Query: 138 RTRSQCRHSGPLRVAMKFPARSTRGA-------------TNKKAESRQPSENSVTDSNSD 184
R+R+ RH V+ PA +R + T+++ S P + S S
Sbjct: 1717 RSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSR 1776
Query: 185 S----------EDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQ 234
S D SG + R ++++ + + + R + S+
Sbjct: 1777 SRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSR 1836
Query: 235 SRRPRRRTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVD 294
RR R RT P R P RSRSR A P + L+ +R++
Sbjct: 1837 RRRGRSRTPPTSRKRSRSRTSPAPWKRSRSR------ASPATHRRSRSRTPLISRRRSRS 1890
Query: 295 GYMNEDDLPRSRRSRSSVT 313
R RSR+SVT
Sbjct: 1891 --RTSPVSRRRSRSRTSVT 1907
Score = 30.4 bits (67), Expect = 3.4
Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 27/173 (15%)
Query: 140 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSED-ESGMNFLEKRA 198
R R S L + RS +++ + SR P + + S S E E + +R+
Sbjct: 1688 RRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRS 1747
Query: 199 LNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARP 258
+ + K S RGR P P +PR G+ R+ RR +
Sbjct: 1748 ASSPRTKTT-------------SRRGRSPSP-------KPR-----GLQRSRSRSRREKT 1782
Query: 259 LTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSS 311
T R GS + + + + R+R+ GY + R SR+S
Sbjct: 1783 RTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP-ARQESSRTS 1834
Score = 29.6 bits (65), Expect = 5.8
Identities = 47/185 (25%), Positives = 67/185 (36%), Gaps = 22/185 (11%)
Query: 138 RTRSQCRHSGPLRVAMKFPA---RSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFL 194
R+RS+ + R + P R +R T+ + R S SVT S S +
Sbjct: 1863 RSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASP----V 1918
Query: 195 EKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPER 254
+R + + S + R R P RR R RT P +RR
Sbjct: 1919 SRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTP----PVTRRRSRSRTPP--VTRRRSRS 1972
Query: 255 RARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTL 314
R P+TR RSR S P+ + V +R++ P +RR S T
Sbjct: 1973 RTSPITRRRSRSRTS----PVTRRRSRSRTSPVTRRRS-----RSRTSPVTRRRSRSRTP 2023
Query: 315 PHIIR 319
P I R
Sbjct: 2024 PAIRR 2028
Score = 29.3 bits (64), Expect = 7.6
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 133 VREGCRTRSQCRHSGPLRV---AMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDES 189
VR R+RS R SG R A + +RS A ++ SR P+ S S S +
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGR-SRSRTPARR 689
Query: 190 GMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASR 249
G + ++++++ + S S RGR GS S+ + R + S
Sbjct: 690 GRSRSRTPRRGRSRSRSLVRRGRSH--SRTPQRRGRS---GSSSERKNKSRTSQRRSRSN 744
Query: 250 RNPERRARPLTRSRSRILGS 269
+PE + ++ RSR L S
Sbjct: 745 SSPEMKKSRISSRRSRSLSS 764
Score = 29.3 bits (64), Expect = 7.6
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 130 LQSVREGCRTRSQCRHS------GPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNS 183
L S R ++R R S P + + P RS G++ KA+SR P S + S+
Sbjct: 762 LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP 821
Query: 184 DSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTF 243
+ +S + + + K ++S +G P ++ QS P+RR+
Sbjct: 822 PPKQKSKTPSRQSHSSSSPHPK---------VKSGTPPRQGSITSPQANEQSVTPQRRSC 872
Query: 244 PGVASRRNPERRARPLTRSRSRILGS 269
S +PE ++R T SR GS
Sbjct: 873 --FESSPDPELKSR--TPSRHSCSGS 894
Score = 28.9 bits (63), Expect = 9.9
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 12/119 (10%)
Query: 159 STRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESF 218
S+ +++ + S S +S + S+S S S + K L K S +
Sbjct: 2610 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPP 2669
Query: 219 PGSFRGRHPLPGSDS------------QSRRPRRRTFPGVASRRNPERRARPLTRSRSR 265
PG R R P DS + RRP + P + ER +R R SR
Sbjct: 2670 PGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSR 2728
>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
Length = 1668
Score = 32.7 bits (73), Expect = 0.69
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 212 MSELESFPGSFRGR-HPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSR 263
+SE++S GR H P S+SR P +R+ P SR +P++ + RSR
Sbjct: 289 ISEIQSLASDHSGRSHDRPPRRSRSRSPDQRSEPSDHSRHSPQQPSNGSLRSR 341
>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
Length = 1748
Score = 32.7 bits (73), Expect = 0.69
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 212 MSELESFPGSFRGR-HPLPGSDSQSRRPRRRTFPGVASRRNPERRARPLTRSR 263
+SE++S GR H P S+SR P +R+ P SR +P++ + RSR
Sbjct: 289 ISEIQSLASDHSGRSHDRPPRRSRSRSPDQRSEPSDHSRHSPQQPSNGSLRSR 341
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 32.7 bits (73), Expect = 0.69
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 122 SEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDS 181
+E Q+ + + V + Q R G A++ T +TN + E R E VT+
Sbjct: 1146 AEAQEDLESERVAR-TKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTEL 1204
Query: 182 NSDSEDESGMNFLEKRALNIKQNKAM--LAKLMSELESFPGSF-RGRHPLPGSDSQSRRP 238
E+E+ ++ + L + +A+ LA+ + + G++ + R L S+ R
Sbjct: 1205 KKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAE 1264
Query: 239 RRRTFPGVASRRNPERRARPLTRSRSRILGSL-DALPMEEEEEEDKYMLVRKRKTVDGYM 297
+R+ E+R R L + G D E E + + V G +
Sbjct: 1265 LSSL---QTARQEGEQRRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGAL 1321
Query: 298 NEDDLPRSRRSRSSVTLPHIIRPVEEITEEE 328
NE + R S+ + + +E+ +EE
Sbjct: 1322 NEAESKTIRLSKELSSTEAQLHDAQELLQEE 1352
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 32.7 bits (73), Expect = 0.69
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 122 SEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDS 181
+E Q+ + + V + Q R G A++ T +TN + E R E VT+
Sbjct: 1138 AEAQEDLESERVAR-TKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTEL 1196
Query: 182 NSDSEDESGMNFLEKRALNIKQNKAM--LAKLMSELESFPGSF-RGRHPLPGSDSQSRRP 238
E+E+ ++ + L + +A+ LA+ + + G++ + R L S+ R
Sbjct: 1197 KKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAE 1256
Query: 239 RRRTFPGVASRRNPERRARPLTRSRSRILGSL-DALPMEEEEEEDKYMLVRKRKTVDGYM 297
+R+ E+R R L + G D E E + + V G +
Sbjct: 1257 LSSL---QTARQEGEQRRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGAL 1313
Query: 298 NEDDLPRSRRSRSSVTLPHIIRPVEEITEEE 328
NE + R S+ + + +E+ +EE
Sbjct: 1314 NEAESKTIRLSKELSSTEAQLHDAQELLQEE 1344
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 32.7 bits (73), Expect = 0.69
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 122 SEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDS 181
+E Q+ + + V + Q R G A++ T +TN + E R E VT+
Sbjct: 1179 AEAQEDLESERVAR-TKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTEL 1237
Query: 182 NSDSEDESGMNFLEKRALNIKQNKAM--LAKLMSELESFPGSF-RGRHPLPGSDSQSRRP 238
E+E+ ++ + L + +A+ LA+ + + G++ + R L S+ R
Sbjct: 1238 KKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAE 1297
Query: 239 RRRTFPGVASRRNPERRARPLTRSRSRILGSL-DALPMEEEEEEDKYMLVRKRKTVDGYM 297
+R+ E+R R L + G D E E + + V G +
Sbjct: 1298 LSSL---QTARQEGEQRRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGAL 1354
Query: 298 NEDDLPRSRRSRSSVTLPHIIRPVEEITEEE 328
NE + R S+ + + +E+ +EE
Sbjct: 1355 NEAESKTIRLSKELSSTEAQLHDAQELLQEE 1385
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 32.7 bits (73), Expect = 0.69
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 13/163 (7%)
Query: 27 SMETSSSSDDSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVL 86
S +S SSD S S +SD+ ++ K S SE + SD++S S+S D
Sbjct: 598 SSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSES------DSSDSDSKSDSSDSNSSDSS 651
Query: 87 DHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHS 146
D+ D +N +DS D S S S S S+ S
Sbjct: 652 DN-----SDSSDSSNSSNSSDSSDSSDSS--DSSSSSDSSNSSDSSDSSDSSNSSESSDS 704
Query: 147 GPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDES 189
+ + + + + ++S S++S + ++SDS D S
Sbjct: 705 SDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSS 747
Score = 31.2 bits (69), Expect = 2.0
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 5/178 (2%)
Query: 27 SMETSSSSD--DSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFS--ESEV 82
S ++S+SSD DS DS +SD+ +++ S + ++ DS N S S S+
Sbjct: 554 SSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS 613
Query: 83 QDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQ 142
D D ++ +DS D + S++ S S
Sbjct: 614 SDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSD 673
Query: 143 CRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRALN 200
S + S ++ +ES S++S +DS SDS D S N + + N
Sbjct: 674 SSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDS-SDSSDSSNSNSSDSDSSN 730
Score = 30.8 bits (68), Expect = 2.6
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 9/163 (5%)
Query: 27 SMETSSSSDDSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVL 86
S ++S+SSD S S +SDN ++ SD S+ DS N S + S+ +
Sbjct: 914 SSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDS------SDSSNSSDSS-NSSDSSNSS 966
Query: 87 DHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHS 146
D D +N +DS D S S+S S S +S
Sbjct: 967 DSSDSNSSDSSDSSNSSDSSDSSDSSDSS--DSSDSSNSSDSSDSSDSSDSSNSSDSSNS 1024
Query: 147 GPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDES 189
+ S ++ ++S S++S + +SDS D S
Sbjct: 1025 SDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1067
Score = 30.0 bits (66), Expect = 4.5
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 2/163 (1%)
Query: 27 SMETSSSSDDSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVL 86
S ++S+SSD S S +SD+ +N+ S S + + DS N S S S D
Sbjct: 785 SNDSSNSSDSSDSSNSSDS-SNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDS-SNSSDSS 842
Query: 87 DHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHS 146
D D +N +DS D S S +S + S
Sbjct: 843 DSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSD 902
Query: 147 GPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDES 189
+ S ++ +ES S+NS + +S+S D S
Sbjct: 903 SDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSS 945
Score = 29.3 bits (64), Expect = 7.6
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 7/164 (4%)
Query: 31 SSSSDDSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVLDHCG 90
SS S DS DS S N +++ S S + +N +ES S+ D D
Sbjct: 1108 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSD 1167
Query: 91 FLQKP-RPDVTNELAGIFHADSDDESFCG----FSESEIQDGMRLQSVREGCRTRSQCRH 145
D +N +DS D S S+S S S
Sbjct: 1168 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1227
Query: 146 SGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDES 189
S + S ++ ++S S++S DS SDS DES
Sbjct: 1228 SSDSNESSDSSDSSDSSDSSNSSDSSDSSDSS--DSTSDSNDES 1269
Score = 28.9 bits (63), Expect = 9.9
Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 2/164 (1%)
Query: 27 SMETSSSSDDSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVL 86
S ++SSSSD S S +SD+ ++ SD S + ++ DS + S S+S+ +
Sbjct: 674 SSDSSSSSDSSNSSDSSDSSDSSNSSESSD-SSDSSDSDSSDSSDSSNSNSSDSDSSNSS 732
Query: 87 DHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHS 146
D +++ + + +S S+ D + S
Sbjct: 733 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSS 792
Query: 147 GPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSN-SDSEDES 189
+ + ++ +++ S S NS SN SDS D S
Sbjct: 793 DSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSS 836
Score = 28.9 bits (63), Expect = 9.9
Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 11/166 (6%)
Query: 27 SMETSSSSDDSCDSFASDNFANTKPKFRSDISEELANVFYEDSDNESFCGFSESEVQDVL 86
S ++S SSD S S +SD+ ++ SD S+ + DS N S S+ D
Sbjct: 1078 SSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS----DSSDSSDSS 1133
Query: 87 DHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQSVREGCRTRSQCRHS 146
D ++E +DS D S S+S S S S
Sbjct: 1134 DSSDSSNSSDSSDSSE-----SSDSSDSS--DSSDSSDSSDSSDSSDSSDSSNSSDSSDS 1186
Query: 147 GPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMN 192
+ S ++ ++S S++S + +SDS D S N
Sbjct: 1187 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN 1232
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,895,107
Number of Sequences: 37866
Number of extensions: 864121
Number of successful extensions: 3975
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 3689
Number of HSP's gapped (non-prelim): 289
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.