Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 87159812
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens]
(427 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens] 840 0.0
gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens] 724 0.0
gi|4502315 ATPase, H+ transporting, lysosomal V1 subunit C1 [Hom... 468 e-132
gi|215982794 myosin VA isoform 2 [Homo sapiens] 38 0.020
gi|215982791 myosin VA isoform 1 [Homo sapiens] 38 0.020
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 34 0.29
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 34 0.29
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 34 0.29
gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens] 33 0.38
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 33 0.38
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 33 0.49
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 32 0.84
gi|38044112 restin isoform b [Homo sapiens] 32 0.84
gi|4506751 restin isoform a [Homo sapiens] 32 0.84
gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo s... 32 0.84
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 32 0.84
gi|122937243 dual specificity phosphatase 27 [Homo sapiens] 32 1.1
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 32 1.4
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 32 1.4
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo... 32 1.4
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 31 1.9
gi|169213343 PREDICTED: zinc finger and SCAN domain containing 5... 31 2.5
gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens] 30 3.2
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 30 3.2
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 30 3.2
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 30 3.2
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 30 3.2
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 30 3.2
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 30 3.2
gi|169214072 PREDICTED: zinc finger and SCAN domain containing 5... 30 4.2
>gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens]
Length = 427
Score = 840 bits (2169), Expect = 0.0
Identities = 427/427 (100%), Positives = 427/427 (100%)
Query: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL
Sbjct: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
Query: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV
Sbjct: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
Query: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY
Sbjct: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
Query: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA
Sbjct: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
Query: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLG 300
KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLG
Sbjct: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLG 300
Query: 301 NPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN 360
NPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN
Sbjct: 301 NPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN 360
Query: 361 FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH 420
FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH
Sbjct: 361 FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH 420
Query: 421 IDLSLLD 427
IDLSLLD
Sbjct: 421 IDLSLLD 427
>gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens]
Length = 381
Score = 724 bits (1869), Expect = 0.0
Identities = 381/427 (89%), Positives = 381/427 (89%), Gaps = 46/427 (10%)
Query: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL
Sbjct: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
Query: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV
Sbjct: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
Query: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY
Sbjct: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
Query: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA
Sbjct: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
Query: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLG 300
KENKFTVREFYYDEKEIEREREEMARLLSDKKQQY
Sbjct: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQY------------------------- 275
Query: 301 NPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN 360
GPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN
Sbjct: 276 ---------------------GPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN 314
Query: 361 FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH 420
FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH
Sbjct: 315 FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH 374
Query: 421 IDLSLLD 427
IDLSLLD
Sbjct: 375 IDLSLLD 381
>gi|4502315 ATPase, H+ transporting, lysosomal V1 subunit C1 [Homo
sapiens]
Length = 382
Score = 468 bits (1204), Expect = e-132
Identities = 238/428 (55%), Positives = 320/428 (74%), Gaps = 49/428 (11%)
Query: 1 MSEFWLISAPGDKENLQALERMNTVTSKSN-LSYNTKFAIPDFKVGTLDSLVGLSDELGK 59
M+EFWLISAPG+K Q E+++ TSK+N L+ +KF IPD KVGTLD LVGLSDEL K
Sbjct: 1 MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAK 60
Query: 60 LDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVS 119
LD F E +++++AQ + +V+EDSK KVQE+LLANGVDL +++T F+WDMAKYP+KQ L +
Sbjct: 61 LDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKN 120
Query: 120 VVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSE 179
+ + IAK + QI+ DLKSR +AYN LK NL+NLE+K+ G+L TR+L++IV K+DFVLDSE
Sbjct: 121 ISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSE 180
Query: 180 YLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
YLVTLLV+VPK N++ W K YE+L++MVVPRS+ +++ED++ L VTLFRK ++DF+ K
Sbjct: 181 YLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHK 240
Query: 240 AKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPL 299
A+ENKF VR+F Y+E+E++ ++EEM RL +DKK+Q+
Sbjct: 241 ARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQF------------------------ 276
Query: 300 GNPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPV 359
GPL+RWLKVNFSEAFIAWIH+KALRVFVESVLRYGLPV
Sbjct: 277 ----------------------GPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPV 314
Query: 360 NFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYF 419
NFQA+LLQP+KK + K+LREVL+ +++HLD AA +I+DA ++IPGL L+ Q+Y+PYVY+
Sbjct: 315 NFQAMLLQPNKK-TLKKLREVLHELYKHLDSSAA-AIIDAPMDIPGLNLSQQEYYPYVYY 372
Query: 420 HIDLSLLD 427
ID +LL+
Sbjct: 373 KIDCNLLE 380
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 37.7 bits (86), Expect = 0.020
Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 15 NLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQS 74
NL+ + T +S+L + + + KV T ++ L +E+ KL E R +
Sbjct: 952 NLEGIYNSETEKLRSDLE-RLQLSEEEAKVAT-GRVLSLQEEIAKLRKDLEQT--RSEKK 1007
Query: 75 VVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLA----Q 130
+E D + E L++N + + + E + + + Q + +T+ K+L Q
Sbjct: 1008 CIEEHADRYKQETEQLVSNLKEENTLLKQ-EKEALNHRIVQQAKEMTETMEKKLVEETKQ 1066
Query: 131 IEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPK 190
+E+DL Y L LE++ D + +E +TL+V VPK
Sbjct: 1067 LELDLNDERLRYQNLLNEFSRLEERY----------DDLKEE---------MTLMVHVPK 1107
Query: 191 PNYSQWQKTYES----------LSDMV-VPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
P + + T+ S +++M +P T+ +E K ++LF K ++ T+
Sbjct: 1108 PGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRTEEPSEKKVP--LDMSLFLK-LQKRVTE 1164
Query: 240 AKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQ 276
++ K +++ E++R+ E++ R + ++++ Q
Sbjct: 1165 LEQEKQVMQD------ELDRKEEQVLRSKAKEEERPQ 1195
>gi|215982791 myosin VA isoform 1 [Homo sapiens]
Length = 1855
Score = 37.7 bits (86), Expect = 0.020
Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 15 NLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQS 74
NL+ + T +S+L + + + KV T ++ L +E+ KL E R +
Sbjct: 952 NLEGIYNSETEKLRSDLE-RLQLSEEEAKVAT-GRVLSLQEEIAKLRKDLEQT--RSEKK 1007
Query: 75 VVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLA----Q 130
+E D + E L++N + + + E + + + Q + +T+ K+L Q
Sbjct: 1008 CIEEHADRYKQETEQLVSNLKEENTLLKQ-EKEALNHRIVQQAKEMTETMEKKLVEETKQ 1066
Query: 131 IEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPK 190
+E+DL Y L LE++ D + +E +TL+V VPK
Sbjct: 1067 LELDLNDERLRYQNLLNEFSRLEERY----------DDLKEE---------MTLMVHVPK 1107
Query: 191 PNYSQWQKTYES----------LSDMV-VPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
P + + T+ S +++M +P T+ +E K ++LF K ++ T+
Sbjct: 1108 PGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRTEEPSEKKVP--LDMSLFLK-LQKRVTE 1164
Query: 240 AKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQ 276
++ K +++ E++R+ E++ R + ++++ Q
Sbjct: 1165 LEQEKQVMQD------ELDRKEEQVLRSKAKEEERPQ 1195
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 33.9 bits (76), Expect = 0.29
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 13 KENLQALE----RMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLI 68
KE L +E R+ + + + TK + D GT SD+L +L+ E+L
Sbjct: 333 KERLHDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTR----ARSDKLHELEK--ENLQ 386
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVT-------HFEWDM---------AKYP 112
+ +E+ D K E L+ + L H W++ ++ P
Sbjct: 387 LKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAP 446
Query: 113 VKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKE 172
K V + + +L ++EM+ +S T L+T ++++E + L + +SK+
Sbjct: 447 QKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKK 506
Query: 173 DFVLDSEYLVTLLVIVPKPNYS--------QWQKTYESLSDMVVPRSTKLITEDKEGGLF 224
+L++E + + N S Q +KT E+L + R K++ ++ E
Sbjct: 507 VEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLREN-SERQIKILEQENEHLNQ 565
Query: 225 TVTLFR---KVIEDFKTK--AKENKF---TVREFYYDEKEIEREREEMARLLSDKKQQ 274
TV+ R ++ + + K KENK +++E +IE E+ ++ + L K++
Sbjct: 566 TVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEK 623
Score = 28.9 bits (63), Expect = 9.3
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 14 ENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIR---- 69
E ++ALE+ N+ + N K + FK T L L E +LD L R
Sbjct: 656 EKIEALEQENSELERENRKL--KKTLDSFKNLTFQ-LESLEKENSQLDEENLELRRNVES 712
Query: 70 ------RMAQSVVEVMEDSKGKVQEHLLANGVDL--TSFVTHFEWDMAKYPV---KQPLV 118
+MAQ +E E K Q L G++L SF +++ + Q L
Sbjct: 713 LKCASMKMAQLQLENKELESEKEQ---LKKGLELLKASFKKTERLEVSYQGLDIENQRLQ 769
Query: 119 SVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDS 178
++ K++ Q+E +L+ TL+ NLE L+ + ++ L + KE+ L+
Sbjct: 770 KTLENSNKKIQQLESELQDLEMENQTLQKNLEELK------ISSKRLEQL-EKENKSLEQ 822
Query: 179 EYLVTLLVIVPKPNYSQWQKTYESLSDM----VVPRSTKLITEDKEGGLFT--VTLFRKV 232
E T + K + K +++ + + K+ +KE + + ++++
Sbjct: 823 E---TSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGIYKES 879
Query: 233 IEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQ 276
K KENK V+ D K + RE+ L+S+K + Q
Sbjct: 880 CVRLKELEKENKELVKRATIDIKTLVTLRED---LVSEKLKTQQ 920
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 33.9 bits (76), Expect = 0.29
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 13 KENLQALE----RMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLI 68
KE L +E R+ + + + TK + D GT SD+L +L+ E+L
Sbjct: 333 KERLHDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTR----ARSDKLHELEK--ENLQ 386
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVT-------HFEWDM---------AKYP 112
+ +E+ D K E L+ + L H W++ ++ P
Sbjct: 387 LKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAP 446
Query: 113 VKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKE 172
K V + + +L ++EM+ +S T L+T ++++E + L + +SK+
Sbjct: 447 QKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKK 506
Query: 173 DFVLDSEYLVTLLVIVPKPNYS--------QWQKTYESLSDMVVPRSTKLITEDKEGGLF 224
+L++E + + N S Q +KT E+L + R K++ ++ E
Sbjct: 507 VEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLREN-SERQIKILEQENEHLNQ 565
Query: 225 TVTLFR---KVIEDFKTK--AKENKF---TVREFYYDEKEIEREREEMARLLSDKKQQ 274
TV+ R ++ + + K KENK +++E +IE E+ ++ + L K++
Sbjct: 566 TVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEK 623
Score = 28.9 bits (63), Expect = 9.3
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 14 ENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIR---- 69
E ++ALE+ N+ + N K + FK T L L E +LD L R
Sbjct: 656 EKIEALEQENSELERENRKL--KKTLDSFKNLTFQ-LESLEKENSQLDEENLELRRNVES 712
Query: 70 ------RMAQSVVEVMEDSKGKVQEHLLANGVDL--TSFVTHFEWDMAKYPV---KQPLV 118
+MAQ +E E K Q L G++L SF +++ + Q L
Sbjct: 713 LKCASMKMAQLQLENKELESEKEQ---LKKGLELLKASFKKTERLEVSYQGLDIENQRLQ 769
Query: 119 SVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDS 178
++ K++ Q+E +L+ TL+ NLE L+ + ++ L + KE+ L+
Sbjct: 770 KTLENSNKKIQQLESELQDLEMENQTLQKNLEELK------ISSKRLEQL-EKENKSLEQ 822
Query: 179 EYLVTLLVIVPKPNYSQWQKTYESLSDM----VVPRSTKLITEDKEGGLFT--VTLFRKV 232
E T + K + K +++ + + K+ +KE + + ++++
Sbjct: 823 E---TSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGIYKES 879
Query: 233 IEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQ 276
K KENK V+ D K + RE+ L+S+K + Q
Sbjct: 880 CVRLKELEKENKELVKRATIDIKTLVTLRED---LVSEKLKTQQ 920
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 33.9 bits (76), Expect = 0.29
Identities = 50/257 (19%), Positives = 109/257 (42%), Gaps = 22/257 (8%)
Query: 76 VEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDL 135
++ +E ++ K+QE+ N L + + + +++ +KQ + A+Q + D
Sbjct: 980 IQQVETTQRKIQENQPENSKTLATQLNQQKMLVSEIEMKQSKMDECQKYAEQYSATVKDY 1039
Query: 136 KSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY--LVTLLVIVPKPNY 193
+ +T Y + +++ +K + ++ +D++ +E L + Y LVTL+
Sbjct: 1040 ELQTMTYRAM---VDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLM-------- 1088
Query: 194 SQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRK---VIEDFKT--KAKENKFTVR 248
+Q+ K + K E E G ++ L R+ V+E+ K K E + V
Sbjct: 1089 TQYIKFAGDSLKRLEEEEIKRCKETSEHGAYSDLLQRQKATVLENSKLTGKISELERMVA 1148
Query: 249 EFYYDEKEIEREREEMARLLSD--KKQQYQTSCVALKK--GSSTFPDHKVKVTPLGNPDR 304
E + +E E ++ + +KQQ ++L+K S ++ ++ +
Sbjct: 1149 ELKKQKSRVEEELPKVREAAENELRKQQRNVEDISLQKIRAESEAKQYRRELETIVREKE 1208
Query: 305 PAAGQTDRERESEGEGE 321
A + +R R+ E E
Sbjct: 1209 AAERELERVRQLTIEAE 1225
>gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens]
Length = 597
Score = 33.5 bits (75), Expect = 0.38
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 190 KPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDF------------- 236
K + ++W+ +YE +D + + KL+ K GG L +
Sbjct: 6 KKHKAEWRSSYEDYADKPLEKPLKLVL--KVGGSEVTELSGSGHDSSYYDDRSDHERERH 63
Query: 237 -KTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVK 295
+ K K+ K + +E + D++E + +EE K+++ + C + P KV+
Sbjct: 64 KEKKKKKKKKSEKEKHLDDEERRKRKEE------KKRKREREHCDTEGEADDFDPGKKVE 117
Query: 296 VTPLGNPDRPAAGQTDRERESE 317
V P PDRP + E+E
Sbjct: 118 VEP--PPDRPVRACRTQPAENE 137
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 33.5 bits (75), Expect = 0.38
Identities = 50/256 (19%), Positives = 99/256 (38%), Gaps = 35/256 (13%)
Query: 77 EVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLK 136
E ++ K ++Q L ++ + T +E D + + ++ K+LAQ + +
Sbjct: 1351 EEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRTEE------LEEAKKKLAQRLQEAE 1404
Query: 137 SRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPN---- 192
A N +LE +++ + ED +LD E + K
Sbjct: 1405 EHVEAVNAKCASLEKTKQRLQNEV-----------EDLMLDVERSNAACAALDKKQRNFD 1453
Query: 193 --YSQWQKTYESLS---DMVVPRSTKLITEDKEGGLFTV-TLFRKVIEDFKTKAKENKFT 246
S+W++ YE + S L TE LF V ++ + ++ +T +ENK
Sbjct: 1454 KVLSEWKQKYEETQAELEASQKESRSLSTE-----LFKVKNVYEESLDQLETLRRENKNL 1508
Query: 247 VREFYYDEKEIEREREEMARLLSDKKQQYQTSC---VALKKGSSTFPDHKVKVTPLGNPD 303
+E ++I +++ L KKQ Q C AL++ ++ + K+ +
Sbjct: 1509 QQEISDLTEQIAEGGKQIHELEKIKKQVEQEKCEIQAALEEAEASLEHEEGKILRIQLEL 1568
Query: 304 RPAAGQTDRERESEGE 319
+ DR+ + E
Sbjct: 1569 NQVKSEVDRKIAEKDE 1584
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 33.1 bits (74), Expect = 0.49
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 41 DFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVV--EVMEDSKGKVQEHLLANGVDLT 98
D +GT++SL + KL AE+L +R+ + + + +E +K ++Q+ L DLT
Sbjct: 1381 DDDLGTIESL---EEAKKKLLKDAEALSQRLEEKALAYDKLEKTKNRLQQEL----DDLT 1433
Query: 99 SFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAY--NTLKTNLENLEKKS 156
+ H ++ + S ++ K+ Q+ + KS +A Y + E EK++
Sbjct: 1434 VDLDH----------QRQVASNLEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKET 1483
Query: 157 MGNLFTRTLSDIV-SKEDFV-------LDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVV 208
R L + + +KE+F D E L++ V K N + +K+ +L V
Sbjct: 1484 KALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGK-NVHELEKSKRALEQQVE 1542
Query: 209 PRSTKL--------ITEDKEGGL-FTVTLFRKVIE-DFKTKAKEN----KFTVREFYYDE 254
T+L TED + L + + E D +T+ ++N + +++ E
Sbjct: 1543 EMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELE 1602
Query: 255 KEIEREREEMARLLSDKKQ 273
E+E ER++ A ++ KK+
Sbjct: 1603 AELEDERKQRALAVASKKK 1621
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 32.3 bits (72), Expect = 0.84
Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 190 KPNYSQWQKTYESLSDMV---VPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFT 246
KP + + ++ SDM+ + S + + E K+ + V ED+ AK +
Sbjct: 35 KPKRTSSSRKMKTKSDMMEENIDTSAQAVAETKQEAV--------VEEDYNENAKNGEAK 86
Query: 247 VREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLGNPDRPA 306
+ E EKEI +EE ++K + + + A K + + + N ++
Sbjct: 87 ITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEE---EDQKEDEEDQNEEKGE 143
Query: 307 AGQTDRERESEGEGE 321
AG+ D++ + E +G+
Sbjct: 144 AGKEDKDEKGEEDGK 158
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 32.3 bits (72), Expect = 0.84
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 123 TIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLV 182
++ + + + L + +N L ++LE L ++++ ++ + +E + E L
Sbjct: 823 SVQRSMQETVNKLHQKEEQFNMLSSDLEKL-RENLADMEAKFREKDEREEQLIKAKEKLE 881
Query: 183 TLLVIVPK---PNYSQWQKTYESL--SDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFK 237
+ + K N SQ K + L + V +T+ E F +K IED
Sbjct: 882 NDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASF----LQKSIEDMT 937
Query: 238 TKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTS---CVALK 283
KA++++ K+ E E++E+ R LSD +++ +TS C LK
Sbjct: 938 VKAEQSQQEAA------KKHEEEKKELERKLSDLEKKMETSHNQCQELK 980
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 32.3 bits (72), Expect = 0.84
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 123 TIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLV 182
++ + + + L + +N L ++LE L ++++ ++ + +E + E L
Sbjct: 858 SVQRSMQETVNKLHQKEEQFNMLSSDLEKL-RENLADMEAKFREKDEREEQLIKAKEKLE 916
Query: 183 TLLVIVPK---PNYSQWQKTYESL--SDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFK 237
+ + K N SQ K + L + V +T+ E F +K IED
Sbjct: 917 NDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASF----LQKSIEDMT 972
Query: 238 TKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTS---CVALK 283
KA++++ K+ E E++E+ R LSD +++ +TS C LK
Sbjct: 973 VKAEQSQQEAA------KKHEEEKKELERKLSDLEKKMETSHNQCQELK 1015
>gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo
sapiens]
Length = 638
Score = 32.3 bits (72), Expect = 0.84
Identities = 63/337 (18%), Positives = 128/337 (37%), Gaps = 58/337 (17%)
Query: 10 PGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIR 69
P E L ++ R++ ++++ + S + K D K+ +L + VG K+ + +
Sbjct: 74 PPSSEKLVSVMRLSDLSTEDDDSGHCKMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAK 133
Query: 70 RMAQSVVEVMEDSKGKVQE---------------------------HLLANGVDLTSFVT 102
R + E +E+ ++ E HL L S +
Sbjct: 134 RFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLV 193
Query: 103 HFEWDMAKYPVKQPLVSVVDTIAKQLAQIEM---DLKSRTAAYNTLKTNLENLEKKSMGN 159
E D A + ++++ DTI K + +M D+ + T L L E+ +
Sbjct: 194 EAEMDGAA--AAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETN--- 248
Query: 160 LFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDK 219
RTL D++ ++ DSE L+ + + ++ E+ S+ L+ +DK
Sbjct: 249 ---RTLRDLLREQHCKEDSERLM-------EQQGALLKRLAEADSEKA---RLLLLLQDK 295
Query: 220 EGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSC 279
+ K +E+ + + K + K +E R + L K+ + C
Sbjct: 296 D----------KEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLC 345
Query: 280 VALKKGSSTFPDHKVKVTPLGNPDRPAAGQTDRERES 316
+ +K + HK +V + + + DR++ES
Sbjct: 346 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKES 382
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 32.3 bits (72), Expect = 0.84
Identities = 63/337 (18%), Positives = 128/337 (37%), Gaps = 58/337 (17%)
Query: 10 PGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIR 69
P E L ++ R++ ++++ + S + K D K+ +L + VG K+ + +
Sbjct: 69 PPSSEKLVSVMRLSDLSTEDDDSGHCKMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAK 128
Query: 70 RMAQSVVEVMEDSKGKVQE---------------------------HLLANGVDLTSFVT 102
R + E +E+ ++ E HL L S +
Sbjct: 129 RFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLV 188
Query: 103 HFEWDMAKYPVKQPLVSVVDTIAKQLAQIEM---DLKSRTAAYNTLKTNLENLEKKSMGN 159
E D A + ++++ DTI K + +M D+ + T L L E+ +
Sbjct: 189 EAEMDGAA--AAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETN--- 243
Query: 160 LFTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDK 219
RTL D++ ++ DSE L+ + + ++ E+ S+ L+ +DK
Sbjct: 244 ---RTLRDLLREQHCKEDSERLM-------EQQGALLKRLAEADSEKA---RLLLLLQDK 290
Query: 220 EGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSC 279
+ K +E+ + + K + K +E R + L K+ + C
Sbjct: 291 D----------KEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLC 340
Query: 280 VALKKGSSTFPDHKVKVTPLGNPDRPAAGQTDRERES 316
+ +K + HK +V + + + DR++ES
Sbjct: 341 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKES 377
>gi|122937243 dual specificity phosphatase 27 [Homo sapiens]
Length = 1158
Score = 32.0 bits (71), Expect = 1.1
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 202 SLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDE---KEIE 258
SL ++P+S + D + L T E ++K + + + D KE+
Sbjct: 778 SLGGCLLPQSQARPSSDMQSVLSCNTTLSSPAESCRSKVRGTSKPIFSLFADNVDLKELG 837
Query: 259 REREEMARLLSDKKQQYQTSCVAL-KKGSSTFPDHKVK 295
R+ +EM L +K +Y+ +A K SS F KVK
Sbjct: 838 RKEKEMQMELREKMSEYKMEKLASDNKRSSLFKKKKVK 875
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 31.6 bits (70), Expect = 1.4
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 13 KENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELG-KLDTFA---ESLI 68
KE+L+ R+N K NL + K I GL +E+ K++T ++LI
Sbjct: 641 KEDLEIEHRINIEKLKDNLGIHYKQQID-----------GLQNEMSQKIETMQFEKDNLI 689
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGV--DLTSFVTHF--EWDMAKYPVK---------Q 115
+ Q ++E+ SK K + L N ++T + E ++ + K Q
Sbjct: 690 TKQNQLILEI---SKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQ 746
Query: 116 PLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFV 175
L + + KQ+ + E DL+ + A + L++ EKK TL D++ V
Sbjct: 747 ELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKD-EKK--------TLEDMLKIHTPV 797
Query: 176 LDSEYLVTLLVIVPKPNYSQWQKTYESL 203
E L+ L I K S W+K E L
Sbjct: 798 SQEERLIFLDSIKSKSKDSVWEKEIEIL 825
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 31.6 bits (70), Expect = 1.4
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 13 KENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELG-KLDTFA---ESLI 68
KE+L+ R+N K NL + K I GL +E+ K++T ++LI
Sbjct: 641 KEDLEIEHRINIEKLKDNLGIHYKQQID-----------GLQNEMSQKIETMQFEKDNLI 689
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGV--DLTSFVTHF--EWDMAKYPVK---------Q 115
+ Q ++E+ SK K + L N ++T + E ++ + K Q
Sbjct: 690 TKQNQLILEI---SKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQ 746
Query: 116 PLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFV 175
L + + KQ+ + E DL+ + A + L++ EKK TL D++ V
Sbjct: 747 ELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKD-EKK--------TLEDMLKIHTPV 797
Query: 176 LDSEYLVTLLVIVPKPNYSQWQKTYESL 203
E L+ L I K S W+K E L
Sbjct: 798 SQEERLIFLDSIKSKSKDSVWEKEIEIL 825
>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
sapiens]
Length = 423
Score = 31.6 bits (70), Expect = 1.4
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 65 ESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLT 98
ES+I + + S VE+M +KG+ ++ +ANGV+++
Sbjct: 280 ESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEIS 313
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 1.9
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 46 TLDSLVGLSDELGKLDTFAESLIRRMA--QSVVEVMEDSKGKVQEHLLANGVDLTSF--- 100
TLDS+ L+ E+ +L+T E L + Q ++E SK ++ + L ++ F
Sbjct: 887 TLDSVTELASEVSQLNTIKEHLEEEIKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQ 946
Query: 101 -----VTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKS-RTAAYNTLKTNLENLEK 154
TH + + K + L ++ I QL + D+++ + + K N+E
Sbjct: 947 HEQMNATHTQLFLEKDEEIKSLQKTIEQIKTQLHEERQDIQTDNSDIFQETKVQSLNIEN 1006
Query: 155 KS 156
S
Sbjct: 1007 GS 1008
>gi|169213343 PREDICTED: zinc finger and SCAN domain containing 5C
[Homo sapiens]
Length = 496
Score = 30.8 bits (68), Expect = 2.5
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 228 LFRKVIEDF----KTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQ--QYQTSCVA 281
LFR+ EDF T K + +R EK++E +REE L S + Q T V
Sbjct: 192 LFRRQEEDFLLPETTVMKGDPKALRPKPTLEKDLEEDREENPGLTSPEPQLPNSPTGVVG 251
Query: 282 LKKGSSTFPDHKVKVTPLGNPDRPAAGQTDRERESEGEGEGPLL 325
K+G P + V + + D P+A +RE + G L
Sbjct: 252 AKEGKE--PQKRASVENV-DADTPSACVVEREASTHSGSRGDAL 292
>gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens]
Length = 1158
Score = 30.4 bits (67), Expect = 3.2
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 53 LSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYP 112
LSD + L+ E+L+ M SV KGK LLA+ L SF + +
Sbjct: 101 LSDSIMNLNVKKEALLAGMVDSV------PKGKQDSTLLAS--LLQSFSSRLQTVALSQQ 152
Query: 113 VKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKK 155
++Q L ++ ++E DL+ A + LKT L+ + K
Sbjct: 153 IRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVK 195
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 30.4 bits (67), Expect = 3.2
Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 51 VGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAK 110
+ LSD KL FA S VE +E+ K + Q+ ++ + +E A
Sbjct: 1371 IQLSDSKKKLQDFA---------STVEALEEGKKRFQK-------EIENLTQQYEEKAAA 1414
Query: 111 YPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVS 170
Y D + K +++ +L + + + NLEKK R +++
Sbjct: 1415 Y----------DKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQ------RKFDQLLA 1458
Query: 171 KEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFR 230
+E + S+Y + + ++ + + + + R+ + E KE T + +
Sbjct: 1459 EEKNI-SSKY-------ADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLK 1510
Query: 231 KVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTS 278
+ED + + V E ++ +E + EEM L + + + Q +
Sbjct: 1511 AEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1558
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 30.4 bits (67), Expect = 3.2
Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 51 VGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAK 110
+ LSD KL FA S VE +E+ K + Q+ ++ + +E A
Sbjct: 1378 IQLSDSKKKLQDFA---------STVEALEEGKKRFQK-------EIENLTQQYEEKAAA 1421
Query: 111 YPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVS 170
Y D + K +++ +L + + + NLEKK R +++
Sbjct: 1422 Y----------DKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQ------RKFDQLLA 1465
Query: 171 KEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFR 230
+E + S+Y + + ++ + + + + R+ + E KE T + +
Sbjct: 1466 EEKNI-SSKY-------ADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLK 1517
Query: 231 KVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTS 278
+ED + + V E ++ +E + EEM L + + + Q +
Sbjct: 1518 AEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1565
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 30.4 bits (67), Expect = 3.2
Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 51 VGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAK 110
+ LSD KL FA S VE +E+ K + Q+ ++ + +E A
Sbjct: 1378 IQLSDSKKKLQDFA---------STVEALEEGKKRFQK-------EIENLTQQYEEKAAA 1421
Query: 111 YPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVS 170
Y D + K +++ +L + + + NLEKK R +++
Sbjct: 1422 Y----------DKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQ------RKFDQLLA 1465
Query: 171 KEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFR 230
+E + S+Y + + ++ + + + + R+ + E KE T + +
Sbjct: 1466 EEKNI-SSKY-------ADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLK 1517
Query: 231 KVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTS 278
+ED + + V E ++ +E + EEM L + + + Q +
Sbjct: 1518 AEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1565
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 30.4 bits (67), Expect = 3.2
Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 51 VGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAK 110
+ LSD KL FA S VE +E+ K + Q+ ++ + +E A
Sbjct: 1371 IQLSDSKKKLQDFA---------STVEALEEGKKRFQK-------EIENLTQQYEEKAAA 1414
Query: 111 YPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVS 170
Y D + K +++ +L + + + NLEKK R +++
Sbjct: 1415 Y----------DKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQ------RKFDQLLA 1458
Query: 171 KEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFR 230
+E + S+Y + + ++ + + + + R+ + E KE T + +
Sbjct: 1459 EEKNI-SSKY-------ADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLK 1510
Query: 231 KVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTS 278
+ED + + V E ++ +E + EEM L + + + Q +
Sbjct: 1511 AEMEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1558
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 30.4 bits (67), Expect = 3.2
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 114 KQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDI-VSKE 172
KQ L + D KQ + E + K LEN++K+ + + + KE
Sbjct: 186 KQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKEEKIWKE 245
Query: 173 DFVLDSEYLVTLLVIVPKPNY---SQWQKTYESLSDMVVPRSTKLITEDKEGGLFTV--T 227
F EY+ L + + + Q +K SL + K+ + K +
Sbjct: 246 KFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQAKYKAFVAYQKYGP 305
Query: 228 LFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQ 274
+ ++ IE K KA+E K + E+E + EE R+ ++K+Q
Sbjct: 306 IIKEQIESKKRKAQEWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQ 352
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 30.4 bits (67), Expect = 3.2
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 114 KQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDI-VSKE 172
KQ L + D KQ + E + K LEN++K+ + + + KE
Sbjct: 186 KQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKEEKIWKE 245
Query: 173 DFVLDSEYLVTLLVIVPKPNY---SQWQKTYESLSDMVVPRSTKLITEDKEGGLFTV--T 227
F EY+ L + + + Q +K SL + K+ + K +
Sbjct: 246 KFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQAKYKAFVAYQKYGP 305
Query: 228 LFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQ 274
+ ++ IE K KA+E K + E+E + EE R+ ++K+Q
Sbjct: 306 IIKEQIESKKRKAQEWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQ 352
>gi|169214072 PREDICTED: zinc finger and SCAN domain containing 5C
[Homo sapiens]
Length = 495
Score = 30.0 bits (66), Expect = 4.2
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 228 LFRKVIEDF----KTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQ-QYQTSCVAL 282
LFR+ EDF T K + +R EK++E +REE L S + Q S V
Sbjct: 192 LFRRQDEDFLLPETTVMKGDPKALRPKPTLEKDLEEDREENPGLTSPEPQLPNSPSVVGA 251
Query: 283 KKGSSTFPDHKVKVTPLGNPDRPAAGQTDRERESEGEGEGPLL 325
K+G P + V + + D P+A +RE + G L
Sbjct: 252 KEGKE--PKKRASVENV-DADTPSACVVEREASTHSGSRGDAL 291
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,433,551
Number of Sequences: 37866
Number of extensions: 594424
Number of successful extensions: 2579
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 2539
Number of HSP's gapped (non-prelim): 90
length of query: 427
length of database: 18,247,518
effective HSP length: 105
effective length of query: 322
effective length of database: 14,271,588
effective search space: 4595451336
effective search space used: 4595451336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.