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Search of human proteins with 85861243
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|85861243 tocopherol (alpha) transfer protein-like [Homo
sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|85861243 tocopherol (alpha) transfer protein-like [Homo sapiens] 692 0.0
gi|85861250 tocopherol (alpha) transfer protein-like [Homo sapiens] 692 0.0
gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens] 184 1e-46
gi|71896667 retinaldehyde binding protein 1-like 2 [Homo sapiens] 183 2e-46
gi|4506541 retinaldehyde binding protein 1 [Homo sapiens] 171 9e-43
gi|4507723 tocopherol (alpha) transfer protein [Homo sapiens] 162 3e-40
gi|4506301 protein tyrosine phosphatase, non-receptor type 9 [Ho... 100 3e-21
gi|27923592 SEC14-like 3 [Homo sapiens] 62 7e-10
gi|238624167 SEC14p-like protein TAP3 isoform b [Homo sapiens] 59 8e-09
gi|28376621 SEC14p-like protein TAP3 isoform a [Homo sapiens] 59 8e-09
gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Hom... 55 7e-08
gi|209364516 SEC14-like 2 isoform 2 [Homo sapiens] 55 9e-08
gi|7110715 SEC14-like 2 isoform 1 [Homo sapiens] 55 9e-08
gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Hom... 54 2e-07
gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Hom... 54 2e-07
gi|150010661 SEC14-like 5 [Homo sapiens] 46 6e-05
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens] 45 1e-04
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 45 1e-04
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 45 1e-04
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens] 45 1e-04
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 45 1e-04
gi|109150407 kelch-like 6 [Homo sapiens] 33 0.37
gi|29336043 caytaxin [Homo sapiens] 32 0.82
gi|4502601 carbonyl reductase 3 [Homo sapiens] 32 0.82
gi|164519146 GATA zinc finger domain containing 2A [Homo sapiens] 32 1.1
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 31 1.8
gi|190886435 RALBP1 associated Eps domain containing 1 isoform a... 31 1.8
gi|190886437 RALBP1 associated Eps domain containing 1 isoform b... 31 1.8
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 30 3.1
>gi|85861243 tocopherol (alpha) transfer protein-like [Homo sapiens]
Length = 342
Score = 692 bits (1787), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA 60
MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA
Sbjct: 1 MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA 60
Query: 61 LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA 120
LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA
Sbjct: 61 LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA 120
Query: 121 LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV 180
LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV
Sbjct: 121 LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV 180
Query: 181 NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK 240
NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK
Sbjct: 181 NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK 240
Query: 241 PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE 300
PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE
Sbjct: 241 PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE 300
Query: 301 FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY 342
FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY
Sbjct: 301 FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY 342
>gi|85861250 tocopherol (alpha) transfer protein-like [Homo sapiens]
Length = 342
Score = 692 bits (1787), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA 60
MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA
Sbjct: 1 MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA 60
Query: 61 LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA 120
LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA
Sbjct: 61 LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA 120
Query: 121 LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV 180
LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV
Sbjct: 121 LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV 180
Query: 181 NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK 240
NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK
Sbjct: 181 NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK 240
Query: 241 PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE 300
PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE
Sbjct: 241 PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE 300
Query: 301 FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY 342
FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY
Sbjct: 301 FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY 342
>gi|27734849 retinaldehyde binding protein 1-like 1 [Homo sapiens]
Length = 354
Score = 184 bits (466), Expect = 1e-46
Identities = 107/264 (40%), Positives = 146/264 (55%), Gaps = 6/264 (2%)
Query: 35 LTEDLVTKAREELQEKPEWRLRDVQALRDMV--RKEYPNLSTSLDDAFLLRFLRARKFDY 92
L+ + + KAR EL E P+ +D+Q +RDM+ R + L T DDAF+LRFLRARKF
Sbjct: 30 LSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRT--DDAFILRFLRARKFHQ 87
Query: 93 DRALQLLVNYHSCRRSWPEVFNNLKPS--ALKDVLASGFLTVLPHTDPRGCHVVCIRPDR 150
A +LL Y R+ ++F N K +K L GF VL + D G ++ +
Sbjct: 88 ADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLFAAN 147
Query: 151 WIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIG 210
W S T+ +RAI L+LE LI+ E Q+NG +++ D+ S +AS P I K I
Sbjct: 148 WDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIE 207
Query: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
LQD FP R VH VN+P ++ +IKPFLK+K R FLHG++LNSLH + L
Sbjct: 208 GLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFL 267
Query: 271 PKEYGGTAGELDTATWNAVLLASE 294
P E+GGT D TW LL +
Sbjct: 268 PSEFGGTLPPYDMGTWARTLLGPD 291
>gi|71896667 retinaldehyde binding protein 1-like 2 [Homo sapiens]
Length = 327
Score = 183 bits (465), Expect = 2e-46
Identities = 106/271 (39%), Positives = 151/271 (55%), Gaps = 6/271 (2%)
Query: 35 LTEDLVTKAREELQEKPEWRLRDVQALRDMV--RKEYPNLSTSLDDAFLLRFLRARKFDY 92
L+ + + KAR EL E P+ +D+Q +RDMV R + L T DDAF+LRFLRARKF +
Sbjct: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRT--DDAFILRFLRARKFHH 65
Query: 93 DRALQLLVNYHSCRRSWPEVFNNLKPS--ALKDVLASGFLTVLPHTDPRGCHVVCIRPDR 150
A +LL Y R+ ++F + K + +K L GF L + D G ++ +
Sbjct: 66 FEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLANLDHYGRKILVLFAAN 125
Query: 151 WIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIG 210
W S Y + + +RAI L+LE +I+ E QVNG V++ D+ + +AS P + + I
Sbjct: 126 WDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIE 185
Query: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
LQD FP R +H VN+P ++ +I+PFLKEK R FLHG++LNSLH + IL
Sbjct: 186 GLQDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEIL 245
Query: 271 PKEYGGTAGELDTATWNAVLLASEDDFVKEF 301
P E+GG D TW LL E D E+
Sbjct: 246 PSEFGGMLPPYDMGTWARTLLDHEYDDDSEY 276
>gi|4506541 retinaldehyde binding protein 1 [Homo sapiens]
Length = 317
Score = 171 bits (433), Expect = 9e-43
Identities = 91/261 (34%), Positives = 152/261 (58%), Gaps = 11/261 (4%)
Query: 33 CS-LTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPN---LSTSL-------DDAFL 81
CS L + KA++EL E+ E R V+ L++MV+ + + L+ ++ D F
Sbjct: 37 CSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFF 96
Query: 82 LRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHTDPRGC 141
LRF+RARKF+ RA +LL Y + R +PE+F++L P A++ + +G+ VL D G
Sbjct: 97 LRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGR 156
Query: 142 HVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFG 201
V+ + W E ++A LEKL+++EETQ+NG I+ ++KG ++ +A+
Sbjct: 157 VVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLR 216
Query: 202 PFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSL 261
+K++ +LQD FP R KA+H +++P F + ++KPFLK K+ R F+HG DL+
Sbjct: 217 TSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGF 276
Query: 262 HTNLPRSILPKEYGGTAGELD 282
+ + +ILP ++GGT + D
Sbjct: 277 YQEIDENILPSDFGGTLPKYD 297
>gi|4507723 tocopherol (alpha) transfer protein [Homo sapiens]
Length = 278
Score = 162 bits (411), Expect = 3e-40
Identities = 94/240 (39%), Positives = 134/240 (55%), Gaps = 5/240 (2%)
Query: 60 ALRDMVRKE-YPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP 118
ALR R+ P L D+FLLRFLRAR FD D A +LL NY+ R PE+ +L P
Sbjct: 30 ALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP 89
Query: 119 SALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEET 178
++ +L +G+ VL DP G V+ R W P + + R +T E ++Q ET
Sbjct: 90 RSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVET 149
Query: 179 QVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAI 238
Q NGI + D +G S A P +AKK+ +L D FP++++ +H++NEP IF +F++
Sbjct: 150 QRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSM 209
Query: 239 IKPFLKEKIANRFFLHGSDL-NSLHTNLPRSILPKEYGGTAGELD--TATWNAVLLASED 295
IKPFL EKI R +HG++ SL + P ILP EYGG ++ W ++ SED
Sbjct: 210 IKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEYGGEEFSMEDICQEWTNFIMKSED 268
>gi|4506301 protein tyrosine phosphatase, non-receptor type 9 [Homo
sapiens]
Length = 593
Score = 99.8 bits (247), Expect = 3e-21
Identities = 71/209 (33%), Positives = 108/209 (51%), Gaps = 12/209 (5%)
Query: 82 LRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKP--SALKDVLASGFLTVLPHTDPR 139
++FL ARKFD RA++L +Y RR E LKP L+ + SG T+L DP
Sbjct: 48 VKFLMARKFDVLRAIELFHSYRETRRK--EGIVKLKPHEEPLRSEILSGKFTILNVRDPT 105
Query: 140 GCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASH 199
G + P ++A++ L++ + S ETQ NG+V + D G S ++
Sbjct: 106 GASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCG---SNYAN 162
Query: 200 FGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRF-FLHGSDL 258
F + KKV+ +L+ FP R+K V +V P F+ ++II LK+K+ R L S++
Sbjct: 163 FELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEV 222
Query: 259 NSLHTNLPRSILPKEYGGTAGELDTATWN 287
+LPR LP+ GG ++D ATWN
Sbjct: 223 TQ---HLPRECLPENLGGYV-KIDLATWN 247
>gi|27923592 SEC14-like 3 [Homo sapiens]
Length = 400
Score = 62.0 bits (149), Expect = 7e-10
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 62 RDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRS--------W--PE 111
R+ V+ P L DD FLLR+LRAR FD ++ LL Y R++ W PE
Sbjct: 20 RENVQDVLPALPNP-DDYFLLRWLRARNFDLQKSEALLRKYMEFRKTMDIDHILDWQPPE 78
Query: 112 VFNNLKPSALKDVLASG---FLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLT 168
V P L G + ++ DP+G + D + L
Sbjct: 79 VIQKYMPGGLCGYDRDGCPVWYDIIGPLDPKGLLFSVTKQDLLKTKMRDCERILHECDLQ 138
Query: 169 LEKLIQSEETQVNGIVILADYKGVSLSKASHF-GPFIA--KKVIGILQDGFPIRIKAVHV 225
E+L + ET IV++ D +G+ L HF P + ++ G+L++ +P +K + +
Sbjct: 139 TERLGKKIET----IVMIFDCEGLGL---KHFWKPLVEVYQEFFGLLEENYPETLKFMLI 191
Query: 226 VNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD-LNSLHTNLPRSILPKEYGGTAGELD 282
V ++F + ++KPFL E + + G++ L + LP ++GGT + D
Sbjct: 192 VKATKLFPVGYNLMKPFLSEDTRRKIIVLGNNWKEGLLKLISPEELPAQFGGTLTDPD 249
>gi|238624167 SEC14p-like protein TAP3 isoform b [Homo sapiens]
Length = 360
Score = 58.5 bits (140), Expect = 8e-09
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRR--------SW--PEVFNNLKPSALKDVLA 126
DD FLLR+LRAR FD ++ +L + R+ +W PEV L
Sbjct: 34 DDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLYDSGGLCGYDY 93
Query: 127 SG---FLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKL-IQSEET--QV 180
G + ++ DP+G + + D I + I+ L L + +Q+++ ++
Sbjct: 94 EGCPVYFNIIGSLDPKGLLLSASKQDM-------IRKRIKVCELLLHECELQTQKLGRKI 146
Query: 181 NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK 240
+++ D +G+SL + ++ IL+ +P +K + V+ P++F F ++K
Sbjct: 147 EMALMVFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVK 206
Query: 241 PFLKEKIANRFFLHGSDLNSLHTN-LPRSILPKEYGGTAGELD 282
F+ E+ + + G + T + LP E+GGT + D
Sbjct: 207 SFMSEETRRKIVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|28376621 SEC14p-like protein TAP3 isoform a [Homo sapiens]
Length = 406
Score = 58.5 bits (140), Expect = 8e-09
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRR--------SW--PEVFNNLKPSALKDVLA 126
DD FLLR+LRAR FD ++ +L + R+ +W PEV L
Sbjct: 34 DDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLYDSGGLCGYDY 93
Query: 127 SG---FLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKL-IQSEET--QV 180
G + ++ DP+G + + D I + I+ L L + +Q+++ ++
Sbjct: 94 EGCPVYFNIIGSLDPKGLLLSASKQDM-------IRKRIKVCELLLHECELQTQKLGRKI 146
Query: 181 NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK 240
+++ D +G+SL + ++ IL+ +P +K + V+ P++F F ++K
Sbjct: 147 EMALMVFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVK 206
Query: 241 PFLKEKIANRFFLHGSDLNSLHTN-LPRSILPKEYGGTAGELD 282
F+ E+ + + G + T + LP E+GGT + D
Sbjct: 207 SFMSEETRRKIVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|169216042 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
sapiens]
Length = 397
Score = 55.5 bits (132), Expect = 7e-08
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 12/217 (5%)
Query: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNL---KPSALKDVLASGFLTVL 133
DD FLLR+LRAR FD ++ +L + R+ ++ N L P ++ A+G
Sbjct: 34 DDYFLLRWLRARSFDLQKSEDMLRKHMEFRKQ-QDLANILAWQPPEVVRLYNANGICGHD 92
Query: 134 PHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ-------VNGIVIL 186
P H+V + + + E +R + + E L++ E Q V I+ +
Sbjct: 93 GEGSPVWYHIVGSLDPKGLLLSASKQELLRDSFRSCELLLRECELQSQKLGKKVEKIIAI 152
Query: 187 ADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEK 246
+G+ L G + ++ L+ +P +K++ VV P++F F ++K ++ E+
Sbjct: 153 FGLEGLGLRDLWKPGIELLQEFFSALEANYPEILKSLIVVRAPKLFAVAFNLVKSYMSEE 212
Query: 247 IANRFFLHGSDLNSLHTN-LPRSILPKEYGGTAGELD 282
+ + G + T + LP E+GGT + D
Sbjct: 213 TRRKVVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|209364516 SEC14-like 2 isoform 2 [Homo sapiens]
Length = 392
Score = 55.1 bits (131), Expect = 9e-08
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 35/243 (14%)
Query: 62 RDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRR--------SW--PE 111
R+ V+ P L DD FLLR+LRAR FD ++ +L + R+ SW PE
Sbjct: 20 RENVQDVLPALPNP-DDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPE 78
Query: 112 VFNNLKPSALKDVLASG---FLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLT 168
V + G + ++ D +G + D + +R L
Sbjct: 79 VIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDL-------LRTKMRECELL 131
Query: 169 LEKLIQSEET---QVNGIVILADYKGVSLSK-----ASHFGPFIAKKVIGILQDGFPIRI 220
L++ +V I I+ D +G+ L +G F+ + ++ +P +
Sbjct: 132 LQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLC-----MFEENYPETL 186
Query: 221 KAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNS-LHTNLPRSILPKEYGGTAG 279
K + VV P++F + +IKPFL E + + G++ L ++ +P EYGGT
Sbjct: 187 KRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMT 246
Query: 280 ELD 282
+ D
Sbjct: 247 DPD 249
>gi|7110715 SEC14-like 2 isoform 1 [Homo sapiens]
Length = 403
Score = 55.1 bits (131), Expect = 9e-08
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 35/243 (14%)
Query: 62 RDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRR--------SW--PE 111
R+ V+ P L DD FLLR+LRAR FD ++ +L + R+ SW PE
Sbjct: 20 RENVQDVLPALPNP-DDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPE 78
Query: 112 VFNNLKPSALKDVLASG---FLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLT 168
V + G + ++ D +G + D + +R L
Sbjct: 79 VIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDL-------LRTKMRECELL 131
Query: 169 LEKLIQSEET---QVNGIVILADYKGVSLSK-----ASHFGPFIAKKVIGILQDGFPIRI 220
L++ +V I I+ D +G+ L +G F+ + ++ +P +
Sbjct: 132 LQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLC-----MFEENYPETL 186
Query: 221 KAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNS-LHTNLPRSILPKEYGGTAG 279
K + VV P++F + +IKPFL E + + G++ L ++ +P EYGGT
Sbjct: 187 KRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMT 246
Query: 280 ELD 282
+ D
Sbjct: 247 DPD 249
>gi|169215836 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
sapiens]
Length = 397
Score = 53.9 bits (128), Expect = 2e-07
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 12/217 (5%)
Query: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNL---KPSALKDVLASGFLTVL 133
DD FLLR+L+AR FD ++ +L + R+ ++ N L P ++ A+G
Sbjct: 34 DDYFLLRWLQARSFDLQKSEDMLRKHMEFRKQ-QDLANILAWQPPEVVRLYNANGICGHD 92
Query: 134 PHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ-------VNGIVIL 186
P H+V + + + E +R + + E L++ E Q V I+ +
Sbjct: 93 GEGSPVWYHIVGSLDPKGLLLSASKQELLRDSFRSCELLLRECELQSQKLGKRVEKIIAI 152
Query: 187 ADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEK 246
+G+ L G + ++ L+ +P +K++ VV P++F F ++K ++ E+
Sbjct: 153 FGLEGLGLRDLWKPGIELLQEFFSALEANYPEILKSLIVVRAPKLFAVAFNLVKSYMSEE 212
Query: 247 IANRFFLHGSDLNSLHTN-LPRSILPKEYGGTAGELD 282
+ + G + T + LP E+GGT + D
Sbjct: 213 TRRKVVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|169215635 PREDICTED: similar to SEC14p-like protein TAP3 [Homo
sapiens]
Length = 397
Score = 53.9 bits (128), Expect = 2e-07
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 12/217 (5%)
Query: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNL---KPSALKDVLASGFLTVL 133
DD FLLR+L+AR FD ++ +L + R+ ++ N L P ++ A+G
Sbjct: 34 DDYFLLRWLQARSFDLQKSEDMLRKHMEFRKQ-QDLANILAWQPPEVVRLYNANGICGHD 92
Query: 134 PHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ-------VNGIVIL 186
P H+V + + + E +R + + E L++ E Q V I+ +
Sbjct: 93 GEGSPVWYHIVGSLDPKGLLLSASKQELLRDSFRSCELLLRECELQSQKLGKRVEKIIAI 152
Query: 187 ADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEK 246
+G+ L G + ++ L+ +P +K++ VV P++F F ++K ++ E+
Sbjct: 153 FGLEGLGLRDLWKPGIELLQEFFSALEANYPEILKSLIVVRAPKLFAVAFNLVKSYMSEE 212
Query: 247 IANRFFLHGSDLNSLHTN-LPRSILPKEYGGTAGELD 282
+ + G + T + LP E+GGT + D
Sbjct: 213 TRRKVVILGDNWKQELTKFISPDQLPVEFGGTMTDPD 249
>gi|150010661 SEC14-like 5 [Homo sapiens]
Length = 696
Score = 45.8 bits (107), Expect = 6e-05
Identities = 46/221 (20%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 78 DAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPE--VFNNLKPSALKDVLASG------- 128
D +LRFLRA F D+A ++L S R+ + +P AL + +G
Sbjct: 264 DEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLEEFYAGGWHYQDI 323
Query: 129 -----FLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ---- 179
++ L D +G + ++ ++ +K + Q
Sbjct: 324 DGRPLYILRLGQMDTKGLMKAV--------GEEALLRHVLSVNEEGQKRCEGSTRQLGRP 375
Query: 180 VNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAII 239
++ L D +G+++ G ++I +++D +P + + +V PR+F ++ +I
Sbjct: 376 ISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLI 435
Query: 240 KPFLKEKIANRFFLH-GSDL---NSLHTNLPRSILPKEYGG 276
PF+ E +F ++ GS+ L L R ++P GG
Sbjct: 436 SPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGG 476
>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
Length = 681
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 47 LQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCR 106
LQE RLR Q L++ + + P D +LRFLRAR F+ D+A +++ + R
Sbjct: 220 LQESCLIRLR--QWLQETHKGKIPK------DEHILRFLRARDFNIDKAREIMCQSLTWR 271
Query: 107 RSWPEVF---NNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIR 163
+ + P L+D A G+ H D G + +R +
Sbjct: 272 KQHQVDYILETWTPPQVLQDYYAGGW----HHHDKDGRPLYVLRLGQMDTKGLVRALGEE 327
Query: 164 AIY-----LTLEKLIQSEE-TQVNGIVI-----LADYKGVSLSKASHFGPFIAKKVIGIL 212
A+ + E L + EE T+V G I L D +G+++ G ++I ++
Sbjct: 328 ALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVV 387
Query: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257
+ +P + + ++ PR+F ++ ++ PF+ + +F ++ +
Sbjct: 388 EANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGN 432
>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 47 LQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCR 106
LQE RLR Q L++ + + P D +LRFLRAR F+ D+A +++ + R
Sbjct: 254 LQESCLIRLR--QWLQETHKGKIPK------DEHILRFLRARDFNIDKAREIMCQSLTWR 305
Query: 107 RSWPEVF---NNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIR 163
+ + P L+D A G+ H D G + +R +
Sbjct: 306 KQHQVDYILETWTPPQVLQDYYAGGW----HHHDKDGRPLYVLRLGQMDTKGLVRALGEE 361
Query: 164 AIY-----LTLEKLIQSEE-TQVNGIVI-----LADYKGVSLSKASHFGPFIAKKVIGIL 212
A+ + E L + EE T+V G I L D +G+++ G ++I ++
Sbjct: 362 ALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVV 421
Query: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257
+ +P + + ++ PR+F ++ ++ PF+ + +F ++ +
Sbjct: 422 EANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGN 466
>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 47 LQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCR 106
LQE RLR Q L++ + + P D +LRFLRAR F+ D+A +++ + R
Sbjct: 254 LQESCLIRLR--QWLQETHKGKIPK------DEHILRFLRARDFNIDKAREIMCQSLTWR 305
Query: 107 RSWPEVF---NNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIR 163
+ + P L+D A G+ H D G + +R +
Sbjct: 306 KQHQVDYILETWTPPQVLQDYYAGGW----HHHDKDGRPLYVLRLGQMDTKGLVRALGEE 361
Query: 164 AIY-----LTLEKLIQSEE-TQVNGIVI-----LADYKGVSLSKASHFGPFIAKKVIGIL 212
A+ + E L + EE T+V G I L D +G+++ G ++I ++
Sbjct: 362 ALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVV 421
Query: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257
+ +P + + ++ PR+F ++ ++ PF+ + +F ++ +
Sbjct: 422 EANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGN 466
>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
Length = 719
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 47 LQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCR 106
LQE RLR Q L++ + + P D +LRFLRAR F+ D+A +++ + R
Sbjct: 254 LQESCLIRLR--QWLQETHKGKIPK------DEHILRFLRARDFNIDKAREIMCQSLTWR 305
Query: 107 RSWPEVF---NNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIR 163
+ + P L+D A G+ H D G + +R +
Sbjct: 306 KQHQVDYILETWTPPQVLQDYYAGGW----HHHDKDGRPLYVLRLGQMDTKGLVRALGEE 361
Query: 164 AIY-----LTLEKLIQSEE-TQVNGIVI-----LADYKGVSLSKASHFGPFIAKKVIGIL 212
A+ + E L + EE T+V G I L D +G+++ G ++I ++
Sbjct: 362 ALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVV 421
Query: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257
+ +P + + ++ PR+F ++ ++ PF+ + +F ++ +
Sbjct: 422 EANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGN 466
>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 47 LQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCR 106
LQE RLR Q L++ + + P D +LRFLRAR F+ D+A +++ + R
Sbjct: 254 LQESCLIRLR--QWLQETHKGKIPK------DEHILRFLRARDFNIDKAREIMCQSLTWR 305
Query: 107 RSWPEVF---NNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIR 163
+ + P L+D A G+ H D G + +R +
Sbjct: 306 KQHQVDYILETWTPPQVLQDYYAGGW----HHHDKDGRPLYVLRLGQMDTKGLVRALGEE 361
Query: 164 AIY-----LTLEKLIQSEE-TQVNGIVI-----LADYKGVSLSKASHFGPFIAKKVIGIL 212
A+ + E L + EE T+V G I L D +G+++ G ++I ++
Sbjct: 362 ALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVV 421
Query: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSD 257
+ +P + + ++ PR+F ++ ++ PF+ + +F ++ +
Sbjct: 422 EANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGN 466
>gi|109150407 kelch-like 6 [Homo sapiens]
Length = 621
Score = 33.1 bits (74), Expect = 0.37
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 243 LKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKEFC 302
LKEK R + G D ++HT L +Y T+ L T +L + + F +F
Sbjct: 105 LKEKYEKRIIIKGVDAETMHTLL-------DYTYTSKALITKQNVQRVLEAANLF--QFL 155
Query: 303 QPVPACDSILGQTLLPEGLTSDAQCDD--SLRAVKSQLYS 340
+ V AC S L + L PE + D SL ++K Q+ S
Sbjct: 156 RMVDACASFLTEALNPENCVGILRLADTHSLDSLKKQVQS 195
>gi|29336043 caytaxin [Homo sapiens]
Length = 371
Score = 32.0 bits (71), Expect = 0.82
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 145 CIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV---NGIVILADYKGVSLSKASHFG 201
C PD +P + I EN+ ++ +L+ +E+ + NG G+
Sbjct: 197 CFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGIGW------- 249
Query: 202 PFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRF-FLHG-SDLN 259
KK ++ +K++ +V+ + + AI +PF+ K N+ ++H DL
Sbjct: 250 ---LKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVHSLEDLE 306
Query: 260 SL----HTNLPRSILPKE 273
L H +P +L E
Sbjct: 307 QLIPMEHVQIPDCVLQYE 324
>gi|4502601 carbonyl reductase 3 [Homo sapiens]
Length = 277
Score = 32.0 bits (71), Expect = 0.82
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 55 LRDVQALRDMVRKEYPNLSTSLDDAFL-LRFLRARKFDYDRALQLLVNYHSCRRSWPEVF 113
L+ ++ALRD +RKEY L+ +++A + + FD + L N+ + R E+
Sbjct: 67 LQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRNMCNELL 126
Query: 114 NNLKP 118
+KP
Sbjct: 127 PIMKP 131
>gi|164519146 GATA zinc finger domain containing 2A [Homo sapiens]
Length = 633
Score = 31.6 bits (70), Expect = 1.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 4 ESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQALRD 63
+S+ SP V LS+NE P P G ++ T+A ++ PE R R ++ L++
Sbjct: 93 KSERRPPSPDVIVLSDNEQPSSPRVNGLTTVALKETSTEAL--MKSSPEERERMIKQLKE 150
Query: 64 MVRKEYPNL 72
+R E L
Sbjct: 151 ELRLEEAKL 159
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 2 SEESDSLRTSPSVASLSENELPPPPEPPGYVCS 34
S S +SPS + S + LPPPP PP + S
Sbjct: 179 SSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSS 211
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 2 SEESDSLRTSPSVASLSENELPPPPEPPGYVCS 34
S S +SPS + S + LPPPP PP + S
Sbjct: 179 SSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSS 211
>gi|190886435 RALBP1 associated Eps domain containing 1 isoform a
[Homo sapiens]
Length = 795
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 179 QVNGIVILADYKGVSLSKASHFGP---FIAKKVIGILQDGFPIRIKAVHVVNE 228
Q+ V+L + ++ +FG +IA K++ + Q GFP+R+++++ V +
Sbjct: 43 QLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQSGFPLRVESINTVKD 95
>gi|190886437 RALBP1 associated Eps domain containing 1 isoform b
[Homo sapiens]
Length = 769
Score = 30.8 bits (68), Expect = 1.8
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 179 QVNGIVILADYKGVSLSKASHFGP---FIAKKVIGILQDGFPIRIKAVHVVNE 228
Q+ V+L + ++ +FG +IA K++ + Q GFP+R+++++ V +
Sbjct: 43 QLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQSGFPLRVESINTVKD 95
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 30.0 bits (66), Expect = 3.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 12 PSVASLSENELPPPPEPP 29
PS A ++ +ELPPPP PP
Sbjct: 588 PSYAGIAGSELPPPPPPP 605
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,152,252
Number of Sequences: 37866
Number of extensions: 665224
Number of successful extensions: 4006
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3914
Number of HSP's gapped (non-prelim): 87
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.