Guide to the Human Genome
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Name: SEC14L2 Sequence: fasta or formatted (403aa) NCBI GI: 7110715
Description:

SEC14-like 2 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [392aa] SEC14-like 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         18           1
 C cysteine            2.2          9           1
 D aspartate           6.2         25           2
 E glutamate           6.9         28           2
 F phenylalanine       4.2         17           1
 G glycine             7.2         29           2
 H histidine           2.0          8           1
 I isoleucine          4.7         19           2
 K lysine              8.4         34           2
 L leucine            10.4         42           3
 M methionine          2.7         11           1
 N asparagine          3.0         12           1
 P proline             6.0         24           2
 Q glutamine           5.0         20           2
 R arginine            5.2         21           1
 S serine              5.0         20           2
 T threonine           4.0         16           2
 V valine              6.7         27           2
 W tryptophan          1.5          6           1
 Y tyrosine            4.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SEC14-like 2 isoform 1 
SEC14L2               0.895   SEC14-like 2 isoform 2 
SEC14L3               0.794   SEC14-like 3 
SEC14L4               0.730   SEC14p-like protein TAP3 isoform a 
LOC730005             0.685   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.682   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.682   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
SEC14L4               0.658   SEC14p-like protein TAP3 isoform b 
SEC14L5               0.207   SEC14-like 5 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform c 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform b 
SEC14L1               0.193   SEC14 (S. cerevisiae)-like 1 isoform a 
TTPA                  0.083   tocopherol (alpha) transfer protein 
RLBP1L2               0.045   retinaldehyde binding protein 1-like 2 
RLBP1L1               0.043   retinaldehyde binding protein 1-like 1 
RLBP1                 0.042   retinaldehyde binding protein 1 
TTPAL                 0.037   tocopherol (alpha) transfer protein-like 
TTPAL                 0.037   tocopherol (alpha) transfer protein-like 
FYCO1                 0.030   FYVE and coiled-coil domain containing 1 
ACBD3                 0.026   acyl-Coenzyme A binding domain containing 3 
LOC553158             0.020   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.020   Rho GTPase activating protein 8 isoform 2 
TMED8                 0.019   transmembrane emp24 protein transport domain contain...
ARHGAP8               0.014   Rho GTPase activating protein 8 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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