Guide to the Human Genome
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Name: DLEC1 Sequence: fasta or formatted (1755aa) NCBI GI: 90669194
Description:

deleted in lung and esophageal cancer 1 isoform DLEC1-N1

Referenced in:

Lung

Other entries for this name:
alt prot [1778aa] deleted in lung and esophageal cancer 1 isoform DLEC1-S3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         93           2
 C cysteine            2.2         38           1
 D aspartate           3.6         64           2
 E glutamate           7.5        132           3
 F phenylalanine       4.2         73           2
 G glycine             6.0        106           2
 H histidine           2.7         47           2
 I isoleucine          4.6         81           2
 K lysine              4.4         78           2
 L leucine            11.1        195           3
 M methionine          2.3         41           1
 N asparagine          2.6         46           2
 P proline             7.6        134           3
 Q glutamine           5.4         94           2
 R arginine            5.0         88           2
 S serine              9.2        162           4
 T threonine           5.7        100           4
 V valine              6.8        120           3
 W tryptophan          1.1         19           1
 Y tyrosine            2.5         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deleted in lung and esophageal cancer 1 isoform DLEC... 
DLEC1                 0.955   deleted in lung and esophageal cancer 1 isoform DLEC...
HYDIN                 0.026   hydrocephalus inducing isoform a 
HYDIN                 0.026   hydrocephalus inducing isoform b 
KIAA1751              0.005   hypothetical protein LOC85452 
CCDC108               0.004   coiled-coil domain containing 108 isoform 1 
CEP250                0.004   centrosomal protein 2 
LOC100133899          0.003   PREDICTED: hypothetical protein 
LOC100290382          0.003   PREDICTED: hypothetical protein XP_002347011 
LOC100289617          0.003   PREDICTED: hypothetical protein XP_002342956 
FHOD3                 0.003   formin homology 2 domain containing 3 
NIN                   0.003   ninein isoform 4 
NIN                   0.003   ninein isoform 5 
NIN                   0.003   ninein isoform 1 
NIN                   0.003   ninein isoform 2 
CXorf22               0.003   hypothetical protein LOC170063 
LIG1                  0.002   DNA ligase I 
STARD9                0.002   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.002   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.002   PREDICTED: StAR-related lipid transfer (START) doma...
MRE11A                0.002   meiotic recombination 11 homolog A isoform 2 
MRE11A                0.002   meiotic recombination 11 homolog A isoform 1 
UBAP1                 0.002   ubiquitin associated protein 1 
NPHS1                 0.002   nephrin precursor 
PREX2                 0.002   DEP domain containing 2 isoform a 
CEP192                0.002   centrosomal protein 192kDa 
BNIP1                 0.002   BCL2/adenovirus E1B 19kD interacting protein 1 isof...
RNF216                0.002   ring finger protein 216 isoform b 
RNF216                0.002   ring finger protein 216 isoform a 
CCDC57                0.002   coiled-coil domain containing 57 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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