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Search of human proteins with 77917604
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|77917604 ubiquitin-binding protein homolog [Homo sapiens]
(309 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|77917604 ubiquitin-binding protein homolog [Homo sapiens] 625 e-179
gi|4827050 ubiquitin specific protease 14 isoform a [Homo sapiens] 43 3e-04
gi|82546824 forkhead box K1 [Homo sapiens] 39 0.004
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 38 0.010
gi|19111150 angiomotin isoform 2 [Homo sapiens] 38 0.013
gi|166064029 angiomotin isoform 1 [Homo sapiens] 38 0.013
gi|82880645 ubiquitin specific protease 14 isoform b [Homo sapiens] 37 0.022
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 37 0.022
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 36 0.038
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 36 0.049
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 36 0.049
gi|153281158 dual specificity phosphatase 8 [Homo sapiens] 36 0.049
gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo ... 35 0.065
gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo ... 35 0.065
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 35 0.065
gi|193083197 ubiquitin-like domain containing CTD phosphatase 1 ... 35 0.084
gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens] 35 0.084
gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens] 35 0.084
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 35 0.11
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 35 0.11
gi|134142824 forkhead box D2 [Homo sapiens] 35 0.11
gi|124494251 BCL2-associated athanogene isoform 1L [Homo sapiens] 34 0.14
gi|158187509 T-box 22 isoform 1 [Homo sapiens] 34 0.14
gi|18375603 T-box 22 isoform 1 [Homo sapiens] 34 0.14
gi|30795231 brain abundant, membrane attached signal protein 1 [... 34 0.19
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 34 0.19
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 34 0.19
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 34 0.19
gi|238859653 pleckstrin homology domain containing family A memb... 33 0.25
gi|238859651 pleckstrin homology domain containing family A memb... 33 0.25
>gi|77917604 ubiquitin-binding protein homolog [Homo sapiens]
Length = 309
Score = 625 bits (1613), Expect = e-179
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MAAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQ 60
MAAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQ
Sbjct: 1 MAAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQ 60
Query: 61 PPGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGL 120
PPGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGL
Sbjct: 61 PPGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGL 120
Query: 121 PPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPKDAAQQDAKAEENK 180
PPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPKDAAQQDAKAEENK
Sbjct: 121 PPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPKDAAQQDAKAEENK 180
Query: 181 KEPLCRQKQHRKVLDKGKPEDVMPSVKGAQERLPTVPLSGMYNKSGGKVRLTFKLEQDQL 240
KEPLCRQKQHRKVLDKGKPEDVMPSVKGAQERLPTVPLSGMYNKSGGKVRLTFKLEQDQL
Sbjct: 181 KEPLCRQKQHRKVLDKGKPEDVMPSVKGAQERLPTVPLSGMYNKSGGKVRLTFKLEQDQL 240
Query: 241 WIGTKERTEKLPMGSIKNVVSEPIEGHEDYHMMAFQLGPTEASYYWVYWVPTQYVDAIKD 300
WIGTKERTEKLPMGSIKNVVSEPIEGHEDYHMMAFQLGPTEASYYWVYWVPTQYVDAIKD
Sbjct: 241 WIGTKERTEKLPMGSIKNVVSEPIEGHEDYHMMAFQLGPTEASYYWVYWVPTQYVDAIKD 300
Query: 301 TVLGKWQYF 309
TVLGKWQYF
Sbjct: 301 TVLGKWQYF 309
>gi|4827050 ubiquitin specific protease 14 isoform a [Homo sapiens]
Length = 494
Score = 43.1 bits (100), Expect = 3e-04
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 85 LVDLKIIWNKTKHD-VKFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPEDKTLREIK 143
L + + W K K + V+ D K ++ ++TG+ PA QKVM KG +D IK
Sbjct: 3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIK 62
Query: 144 VTSGAKIMVVGSTINDVLAVNTPKDAAQQDAKAEENKKEPL 184
+ +G ++++GS D L P++ + + E+ +E L
Sbjct: 63 IKNGMTLLMMGSA--DAL----PEEPSAKTVFVEDMTEEQL 97
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 39.3 bits (90), Expect = 0.004
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 10 MEEPGMDTEAETVAT--EAPARPVNCLEAEAAA-GAAAEDSGAARGSLQPAPAQPPGDPA 66
M E G D+ A + AP PV C A AAA AAA A+ P P PP P
Sbjct: 1 MAEVGEDSGARALLALRSAPCSPVLCAAAAAAAFPAAAPPPAPAQPQPPPGPPPPPPPPL 60
Query: 67 AQASVSNGEDAGGGAG 82
+++ +GG +G
Sbjct: 61 PPGAIAGAGSSGGSSG 76
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 38.1 bits (87), Expect = 0.010
Identities = 52/197 (26%), Positives = 79/197 (40%), Gaps = 23/197 (11%)
Query: 8 DGMEEPGMDTEAETVATEAP-ARPVNCLEAEAAAGAAAEDSG--AARGSLQPAPAQPPGD 64
D EEP + EA T P + + LE A AGA+A A L P P + G
Sbjct: 36 DSGEEPRGEAEAPHHGTGHPESAGEHALEPPAPAGASASTPPPPAPEAQLPPFPRELAGR 95
Query: 65 PAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLD-----STGSELKQK--IHS- 116
A +S GED+ G +K +T +FP S+G LK IH
Sbjct: 96 SAGGSSPEGGEDSDREDGNYCPPVK--RERTSSLTQFPPSQSEERSSGFRLKPPTLIHGQ 153
Query: 117 --ITGLPPAMQKVMYKGLV-------PEDKTLREIKVTSGAKIMVVGSTINDVLAVNTPK 167
GLP K + ++ P+ K L + +SG + + + + +P
Sbjct: 154 APSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPD 213
Query: 168 DAA-QQDAKAEENKKEP 183
AA + ++A + +KEP
Sbjct: 214 TAAWRSPSEAADEEKEP 230
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 37.7 bits (86), Expect = 0.013
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 MAAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAA-EDSGAARGSLQPAPA 59
+AAA AP P T A T A +PA A + A AAA S AA ++Q APA
Sbjct: 506 VAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPA 565
Query: 60 QPPGDPA 66
P PA
Sbjct: 566 APAPVPA 572
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 37.7 bits (86), Expect = 0.013
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 MAAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAA-EDSGAARGSLQPAPA 59
+AAA AP P T A T A +PA A + A AAA S AA ++Q APA
Sbjct: 915 VAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPA 974
Query: 60 QPPGDPA 66
P PA
Sbjct: 975 APAPVPA 981
>gi|82880645 ubiquitin specific protease 14 isoform b [Homo sapiens]
Length = 459
Score = 37.0 bits (84), Expect = 0.022
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 85 LVDLKIIWNKTKHD-VKFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPEDKTLREIK 143
L + + W K K + V+ D K ++ ++TG+ PA QKVM KG +D IK
Sbjct: 3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIK 62
Query: 144 V---------TSGAKIMVVGSTINDVLAVNTPKDAAQQDAKA 176
+ T+ + +T+ + +V KDA ++ A A
Sbjct: 63 IKNMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGA 104
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 37.0 bits (84), Expect = 0.022
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 3 AAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQPP 62
A G +EP + + T +PA P +C AEAA G AE + + G L+P P +
Sbjct: 2022 AEGTSFPPQEPRHSPQVKMAPTSSPAEP-HCWPAEAALGTGAEPTCSQEGKLRPEPRR-- 2078
Query: 63 GDPAAQASVS 72
D AQ + S
Sbjct: 2079 -DGEAQEAAS 2087
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 36.2 bits (82), Expect = 0.038
Identities = 56/204 (27%), Positives = 78/204 (38%), Gaps = 32/204 (15%)
Query: 8 DGMEEPGMDTEAETVATEAP-ARPVNCLEAEAAAGAAAEDSG--AARGSLQPAPAQPPGD 64
D EEP + EA T P + + LE A AGA+A A L P P + G
Sbjct: 36 DSGEEPRGEAEAPHHGTGHPESAGEHALEPPAPAGASASTPPPPAPEAQLPPFPRELAGR 95
Query: 65 PAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLD-----STGSELKQK--IHS- 116
A +S GED+ G +K +T +FP S+G LK IH
Sbjct: 96 SAGGSSPEGGEDSDREDGNYCPPVK--RERTSSLTQFPPSQSEERSSGFRLKPPTLIHGQ 153
Query: 117 --ITGLPPAMQKVMYKGLV-------PEDKTLREIKVTSGAKIM--------VVGSTIND 159
GLP K + ++ P+ K L + +SG + V + D
Sbjct: 154 APSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPD 213
Query: 160 VLAVNTPKDAAQQDAKAEENKKEP 183
A +P +AA + EE KEP
Sbjct: 214 TAAWRSPSEAADEVCALEE--KEP 235
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 35.8 bits (81), Expect = 0.049
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 102 PLDSTGSELKQKIHSITGLPPAMQKVMYKGL-VPEDKTLREIKVTSGAKI 150
PL S +K KIH TG+P QK+ Y+G+ + + +L + +GA I
Sbjct: 667 PLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVI 716
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 35.8 bits (81), Expect = 0.049
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 102 PLDSTGSELKQKIHSITGLPPAMQKVMYKGL-VPEDKTLREIKVTSGAKI 150
PL S +K KIH TG+P QK+ Y+G+ + + +L + +GA I
Sbjct: 732 PLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVI 781
>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
Length = 625
Score = 35.8 bits (81), Expect = 0.049
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 5 GAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQPPGD 64
G P G EP A P P E+ A AAA + G + G PAP PP
Sbjct: 311 GTPSGTPEPPPSPAA---GAPLPRLPPPTSESAATGNAAAREGGLSAGGEPPAPPTPPAT 367
Query: 65 PAAQ 68
A Q
Sbjct: 368 SALQ 371
>gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo
sapiens]
Length = 166
Score = 35.4 bits (80), Expect = 0.065
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 6 APDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQPPGDP 65
A +G + G D A + A EAP E GA A ++GAARG + PPG
Sbjct: 81 ATNGTRQQG-DLPALSAAAEAPR------EGGKEEGAGAREAGAARGRARGPQPSPPGSS 133
Query: 66 AAQA 69
AA+A
Sbjct: 134 AAKA 137
>gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo
sapiens]
Length = 166
Score = 35.4 bits (80), Expect = 0.065
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 6 APDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQPPGDP 65
A +G + G D A + A EAP E GA A ++GAARG + PPG
Sbjct: 81 ATNGTRQQG-DLPALSAAAEAPR------EGGKEEGAGAREAGAARGRARGPQPSPPGSS 133
Query: 66 AAQA 69
AA+A
Sbjct: 134 AAKA 137
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 35.4 bits (80), Expect = 0.065
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 19 AETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQPPGDPAAQASVSNGEDAG 78
A AT AP AAA AAA + AA G PAP P D A + E AG
Sbjct: 30 ANAAATPAPGNA-------AAAAAAAAAAAAAPGPTPPAPPGPGTDAQAAGAERAEEAAG 82
Query: 79 GGAGRELVDLKIIWNKTKHDVK 100
GA + W +K V+
Sbjct: 83 PGAAALQREAAYNWQASKPTVQ 104
Score = 34.3 bits (77), Expect = 0.14
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 3 AAGAPDGMEE--PGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQ 60
AAG G PG+ T + P+ A A AAA + AA + P P
Sbjct: 2 AAGGSGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPTPPA 61
Query: 61 PPGDPAAQASVSNGEDAGGGAG 82
PPG P A + E A AG
Sbjct: 62 PPG-PGTDAQAAGAERAEEAAG 82
>gi|193083197 ubiquitin-like domain containing CTD phosphatase 1
[Homo sapiens]
Length = 318
Score = 35.0 bits (79), Expect = 0.084
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 104 DSTGSELKQKIHSITGLPPAMQKVM---YKGLVPE-DKTLREIKVTSGAKIMVVGS---T 156
D T +LKQ + ++TG+ P QK++ KG E D L +K+ KIM++G+ +
Sbjct: 22 DDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREES 81
Query: 157 INDVLAVNTPKDAAQQDAKAEENKKEPLCRQKQHRKV 193
+ DVL D D E+ E R++ K+
Sbjct: 82 LEDVLGPPPDNDDVVNDFDIEDEVVEVENREENLLKI 118
>gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens]
Length = 377
Score = 35.0 bits (79), Expect = 0.084
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 MEEPGMDTEAETVATEAPARPVNCL-EAEAAAGAAAEDSGAARGSLQPAPAQPPGDPAAQ 68
M +PG +A T E A P +AEA AGA +D G A P+ AA
Sbjct: 30 MAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGQASPCTPSTPSVCSPPSAAS 89
Query: 69 ASVSNGEDAGGGAGRELVD 87
+ S G++ G E++D
Sbjct: 90 SVPSAGKNICSSCGLEILD 108
>gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens]
Length = 392
Score = 35.0 bits (79), Expect = 0.084
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 MEEPGMDTEAETVATEAPARPVNCL-EAEAAAGAAAEDSGAARGSLQPAPAQPPGDPAAQ 68
M +PG +A T E A P +AEA AGA +D G A P+ AA
Sbjct: 30 MAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGQASPCTPSTPSVCSPPSAAS 89
Query: 69 ASVSNGEDAGGGAGRELVD 87
+ S G++ G E++D
Sbjct: 90 SVPSAGKNICSSCGLEILD 108
>gi|21264565 AT rich interactive domain 1A isoform a [Homo
sapiens]
Length = 2285
Score = 34.7 bits (78), Expect = 0.11
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 3 AAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPA--- 59
A A + P +E E R EA AAA A + AA G PA
Sbjct: 6 APAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGP 65
Query: 60 -QPPGDPAAQASVSNGEDAGGGAG 82
QP G + SNG GGGAG
Sbjct: 66 PQPLGKELQDGAESNGGGGGGGAG 89
>gi|21264575 AT rich interactive domain 1A isoform b [Homo
sapiens]
Length = 2068
Score = 34.7 bits (78), Expect = 0.11
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 3 AAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPA--- 59
A A + P +E E R EA AAA A + AA G PA
Sbjct: 6 APAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGP 65
Query: 60 -QPPGDPAAQASVSNGEDAGGGAG 82
QP G + SNG GGGAG
Sbjct: 66 PQPLGKELQDGAESNGGGGGGGAG 89
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 34.7 bits (78), Expect = 0.11
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 7 PDGMEEPGMDTEAETVATEAPA--------RPVNCLEAEAAAGAAAEDSGAARGSLQPAP 58
P G E P + EA+ E + R + A AAAG+ + AARG+ P P
Sbjct: 53 PHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGP 112
Query: 59 AQPPGDPAAQA 69
P G A ++
Sbjct: 113 GPPSGGAATRS 123
>gi|124494251 BCL2-associated athanogene isoform 1L [Homo sapiens]
Length = 345
Score = 34.3 bits (77), Expect = 0.14
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 14/161 (8%)
Query: 5 GAPDGMEEPGMD--TEAETVATEAPARPVNCLEAEAAAGA--AAEDSGAARGSLQPAPAQ 60
GA G P M T + +E R +E A + A + A +G +
Sbjct: 62 GAAAGARRPRMKKKTRRRSTRSEELTRSEELTLSEEATWSEEATQSEEATQGEEMNRSQE 121
Query: 61 PPGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSE-----LKQKIH 115
D + S + AG + + + + KHD+ SE L Q +
Sbjct: 122 VTRDEESTRSEEVTREEMAAAG---LTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVE 178
Query: 116 SITGLPPAMQKVMYKG--LVPEDKTLREIKVTSGAKIMVVG 154
+ G+P + QK+++KG L + L + + G ++M++G
Sbjct: 179 EVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIG 219
>gi|158187509 T-box 22 isoform 1 [Homo sapiens]
Length = 520
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 45 EDSGAARGSLQPAPAQPPGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLD 104
E +A G +P QP +P+ AS G D+G G E ++ K D++ L
Sbjct: 46 ERRSSAAGKSEPLEKQPKTEPSTSASSGCGSDSGYGNSSESLEEK--------DIQMELQ 97
Query: 105 STGSELKQKIHSI 117
GSEL ++ H I
Sbjct: 98 --GSELWKRFHDI 108
>gi|18375603 T-box 22 isoform 1 [Homo sapiens]
Length = 520
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 45 EDSGAARGSLQPAPAQPPGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLD 104
E +A G +P QP +P+ AS G D+G G E ++ K D++ L
Sbjct: 46 ERRSSAAGKSEPLEKQPKTEPSTSASSGCGSDSGYGNSSESLEEK--------DIQMELQ 97
Query: 105 STGSELKQKIHSI 117
GSEL ++ H I
Sbjct: 98 --GSELWKRFHDI 108
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 33.9 bits (76), Expect = 0.19
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 5 GAPDGMEEPGMDTEAETVAT------EAP-ARPVNCLEAEAAAGAAAEDSGAARGSLQPA 57
GA + EP E E A EAP A AE+AA AA E+ G +P
Sbjct: 92 GAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEG--EPK 149
Query: 58 PAQPPGDPAAQASVSNGEDA 77
+ P PAAQ + S+G A
Sbjct: 150 KTEAPAAPAAQETKSDGAPA 169
Score = 30.0 bits (66), Expect = 2.7
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 11 EEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSGAARGSLQPAPAQPPGDPAAQAS 70
E P + E A EA A P E E AA G A G P A+ PA A+
Sbjct: 81 EAPKAEPEKTEGAAEAKAEPPKAPEQEQAA------PGPAAGGEAPKAAEAAAAPAESAA 134
Query: 71 VSNGED 76
+ GE+
Sbjct: 135 PAAGEE 140
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 33.9 bits (76), Expect = 0.19
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 2 AAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSG--AARGSL-QPA- 57
AAA P AE AP+RP C AA+ A E+ G A G L +PA
Sbjct: 31 AAASPEPARAPPEPAPPAEATGAPAPSRP--CAPEPAASPAGPEEPGEPAGLGELGEPAG 88
Query: 58 PAQP--PGDPAA 67
P +P PGDPAA
Sbjct: 89 PGEPEGPGDPAA 100
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 33.9 bits (76), Expect = 0.19
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 2 AAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSG--AARGSL-QPA- 57
AAA P AE AP+RP C AA+ A E+ G A G L +PA
Sbjct: 31 AAASPEPARAPPEPAPPAEATGAPAPSRP--CAPEPAASPAGPEEPGEPAGLGELGEPAG 88
Query: 58 PAQP--PGDPAA 67
P +P PGDPAA
Sbjct: 89 PGEPEGPGDPAA 100
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 33.9 bits (76), Expect = 0.19
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 2 AAAGAPDGMEEPGMDTEAETVATEAPARPVNCLEAEAAAGAAAEDSG--AARGSL-QPA- 57
AAA P AE AP+RP C AA+ A E+ G A G L +PA
Sbjct: 31 AAASPEPARAPPEPAPPAEATGAPAPSRP--CAPEPAASPAGPEEPGEPAGLGELGEPAG 88
Query: 58 PAQP--PGDPAA 67
P +P PGDPAA
Sbjct: 89 PGEPEGPGDPAA 100
>gi|238859653 pleckstrin homology domain containing family A member
4 isoform 2 [Homo sapiens]
Length = 583
Score = 33.5 bits (75), Expect = 0.25
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 5 GAPDGM------EEPGMDTEAETVATEAPARPVNCLEAEAAAGAA-AEDSGAARGSLQPA 57
GAP G E PGM T T R L A A A +D G R +P
Sbjct: 112 GAPRGRRFTFTAEHPGMRTYVLAADTLEDLR--GWLRALGRASRAEGDDYGQPRSPARPQ 169
Query: 58 PAQPPGDPAAQASVSNGED 76
P + PG P VS GE+
Sbjct: 170 PGEGPGGPGGPPEVSRGEE 188
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 33.5 bits (75), Expect = 0.25
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 5 GAPDGM------EEPGMDTEAETVATEAPARPVNCLEAEAAAGAA-AEDSGAARGSLQPA 57
GAP G E PGM T T R L A A A +D G R +P
Sbjct: 112 GAPRGRRFTFTAEHPGMRTYVLAADTLEDLR--GWLRALGRASRAEGDDYGQPRSPARPQ 169
Query: 58 PAQPPGDPAAQASVSNGED 76
P + PG P VS GE+
Sbjct: 170 PGEGPGGPGGPPEVSRGEE 188
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,116,327
Number of Sequences: 37866
Number of extensions: 661119
Number of successful extensions: 4158
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 3870
Number of HSP's gapped (non-prelim): 393
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.