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Search of human proteins with 77404397
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|77404397 staphylococcal nuclease domain containing 1 [Homo
sapiens]
(910 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|77404397 staphylococcal nuclease domain containing 1 [Homo sa... 1812 0.0
gi|38505161 tudor domain containing 1 [Homo sapiens] 58 5e-08
gi|94421471 ring finger protein 17 [Homo sapiens] 56 1e-07
gi|58197558 tudor domain containing 6 [Homo sapiens] 54 9e-07
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 49 2e-05
gi|145312246 tudor and KH domain containing isoform b [Homo sapi... 49 2e-05
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 49 2e-05
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 49 2e-05
gi|169163653 PREDICTED: similar to tudor domain containing 1 [Ho... 48 4e-05
gi|169164192 PREDICTED: similar to tudor domain containing 1 [Ho... 48 4e-05
gi|169163210 PREDICTED: similar to tudor domain containing 1 [Ho... 48 4e-05
gi|112293287 tudor domain containing 7 [Homo sapiens] 46 2e-04
gi|40255178 tudor domain containing 5 [Homo sapiens] 44 5e-04
gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens] 41 0.006
gi|170784859 serine/threonine kinase 31 isoform b [Homo sapiens] 39 0.029
gi|14602443 serine/threonine kinase 31 isoform a [Homo sapiens] 39 0.029
gi|170784856 serine/threonine kinase 31 isoform b [Homo sapiens] 39 0.029
gi|166851804 tudor domain containing 9 [Homo sapiens] 36 0.14
gi|28416940 Shwachman-Bodian-Diamond syndrome protein [Homo sapi... 35 0.32
gi|189571674 cadherin-like 23 isoform 1 precursor [Homo sapiens] 33 1.2
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 32 2.7
gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens] 32 3.5
gi|9910266 kinesin family member 15 [Homo sapiens] 31 6.0
gi|148806891 hypothetical protein LOC54906 [Homo sapiens] 31 6.0
gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens] 30 7.8
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 30 7.8
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 30 7.8
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 30 7.8
>gi|77404397 staphylococcal nuclease domain containing 1 [Homo
sapiens]
Length = 910
Score = 1812 bits (4694), Expect = 0.0
Identities = 910/910 (100%), Positives = 910/910 (100%)
Query: 1 MASSAQSGGSSGGPAVPTVQRGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLA 60
MASSAQSGGSSGGPAVPTVQRGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLA
Sbjct: 1 MASSAQSGGSSGGPAVPTVQRGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLA 60
Query: 61 RRAAATQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNG 120
RRAAATQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNG
Sbjct: 61 RRAAATQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNG 120
Query: 121 ENIAESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTIRDLKYTI 180
ENIAESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTIRDLKYTI
Sbjct: 121 ENIAESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTIRDLKYTI 180
Query: 181 ENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSET 240
ENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSET
Sbjct: 181 ENPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSET 240
Query: 241 PEPFAAEAKFFTESRLLQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCVDWS 300
PEPFAAEAKFFTESRLLQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCVDWS
Sbjct: 241 PEPFAAEAKFFTESRLLQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCVDWS 300
Query: 301 IAVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVKL 360
IAVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVKL
Sbjct: 301 IAVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLNADAIVVKL 360
Query: 361 NSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVD 420
NSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVD
Sbjct: 361 NSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVD 420
Query: 421 YIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL 480
YIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL
Sbjct: 421 YIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL 480
Query: 481 AAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL 540
AAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL
Sbjct: 481 AAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL 540
Query: 541 KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES 600
KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES
Sbjct: 541 KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES 600
Query: 601 MDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAH 660
MDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAH
Sbjct: 601 MDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAH 660
Query: 661 YEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIAS 720
YEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIAS
Sbjct: 661 YEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIAS 720
Query: 721 HPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTL 780
HPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTL
Sbjct: 721 HPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTL 780
Query: 781 SPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHV 840
SPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHV
Sbjct: 781 SPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHV 840
Query: 841 TLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRA 900
TLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRA
Sbjct: 841 TLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYGDFRA 900
Query: 901 DDADEFGYSR 910
DDADEFGYSR
Sbjct: 901 DDADEFGYSR 910
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 57.8 bits (138), Expect = 5e-08
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 687 VTEITDDLHFYVQ--DVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDG 743
VTE FYVQ E + +L +++ A+ E Y P +GE CIAK+ VD
Sbjct: 270 VTEFKHPGDFYVQLYSSEVLEYMNQLSASLKETYANVH--EKDYIPVKGEVCIAKYTVDQ 327
Query: 744 EWYRARVEKVE-SPAKIHVFYIDYGNREVLPSTRL 777
W RA ++ V+ K HV YIDYGN E++P R+
Sbjct: 328 TWNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRI 362
Score = 56.2 bits (134), Expect = 1e-07
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 687 VTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFV-DGEW 745
V I F+ Q +++G +L +L ++ PP Y P G+ C A+F D +W
Sbjct: 500 VAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPPRSDFY-PAIGDICCAQFSEDDQW 558
Query: 746 YRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQ 802
YRA V S + V Y+DYGN E+L RL + P LP QA + A ++
Sbjct: 559 YRASVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLE--LPMQAIKCVLAGVK 613
Score = 44.7 bits (104), Expect = 4e-04
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 709 KLMENMRNDIASH--PPVEGSYAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYID 765
K + ++ +A H + + G+ C A F DG WYRA V+++ + V ++D
Sbjct: 740 KKLNDLNKSLAEHCQQKLPNGFKAEIGQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVD 799
Query: 766 YGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQ 802
YGN E + + L +S F LP Q A IQ
Sbjct: 800 YGNIEEVTADELRMISSTFLN--LPFQGIRCQLADIQ 834
Score = 43.5 bits (101), Expect = 9e-04
Identities = 27/59 (45%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 720 SHPPVEGSYAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRL 777
S PP Y PR G+ C AK+ D WYRA V S + V Y DYGN E LP R+
Sbjct: 985 SRPP----YRPRIGDACCAKYTSDDFWYRAVVLGT-SDTDVEVLYADYGNIETLPLCRV 1038
>gi|94421471 ring finger protein 17 [Homo sapiens]
Length = 1623
Score = 56.2 bits (134), Expect = 1e-07
Identities = 73/317 (23%), Positives = 131/317 (41%), Gaps = 33/317 (10%)
Query: 569 GLVQEGEPFSEEATLFTKELVLQR-----EVEVEVESMDKAGNFIGWLHIDGANLSVLLV 623
GL+++ +P ++ +L K++V Q E E +VE + N + + VL+V
Sbjct: 564 GLLKDIQPLAQPCSL--KDIVPQNSNEGWEEEAKVEFLKMVNNKAVSMKVFREEDGVLIV 621
Query: 624 EHALSKVH-FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSASY 682
+ + +++ + L E AK K + + +H+E+ P + KE +
Sbjct: 622 DLQKPPPNKISSDMPVSLRDALVFMELAKFKSQSLRSHFEKNTTLHYHPPILPKEMTDV- 680
Query: 683 KPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSY-APRRGEFCIAKFV 741
V V I FY+Q +E G + L++ + S P + + C+AKF
Sbjct: 681 -SVTVCHINSPGDFYLQLIE-GLDILFLLKTIEEFYKSEDGENLEILCPVQDQACVAKFE 738
Query: 742 DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFI 801
DG WYRA+V + ++ V Y+D+GN + + + F P +A + A+I
Sbjct: 739 DGIWYRAKVIGLPGHQEVEVKYVDFGNTAKITIKDVRKIKDEFLN--APEKAIKCKLAYI 796
Query: 802 QVPQ-------------DDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQFADSK 848
+ + ++ A+ + V I LL S G P +T + +
Sbjct: 797 EPYKRTMQWSKEAKEKFEEKAQDKFMTCSVIKILEDNVLLVELFDSLGAPEMTTTSINDQ 856
Query: 849 GDVGLGLVKEGLVMVEV 865
LVKEGL E+
Sbjct: 857 ------LVKEGLASYEI 867
Score = 43.9 bits (102), Expect = 7e-04
Identities = 67/333 (20%), Positives = 137/333 (41%), Gaps = 60/333 (18%)
Query: 574 GEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGW------LHIDGANLSVLLVEHAL 627
G + +A ++L+ +R+V++ + + K W L+ DG +LS + +
Sbjct: 1300 GNVWQPDAIEVLQQLLSKRQVDIHIMELPKNP----WEKLSIHLYFDGMSLSYFMAYYKY 1355
Query: 628 SKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQ-PVEEVMPVLEEKERSASYKP-- 684
T E K ++ K ++E+ +EE E P+L S+ P
Sbjct: 1356 CTSEHTEEM---LKEKPRSDHDKKYEEEQWEIRFEELLSAETDTPLLPPYLSSSLPSPGE 1412
Query: 685 VFVTEIT-----DDLHFYVQDVETGTQ--------------------LEKLMENMRNDIA 719
++ ++ ++++ + +ET Q L++ ++ + +
Sbjct: 1413 LYAVQVKHVVSPNEVYICLDSIETSNQSNQHSDTDDSGVSGESESESLDEALQRVNKKVE 1472
Query: 720 SHPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVE--SPAKIHVFYIDYGNREVLPSTRL 777
+ PP+ R C+A++ DG WYRA++ ++ +P I V ++DYG+ L RL
Sbjct: 1473 ALPPLTDF---RTEMPCLAEYDDGLWYRAKIVAIKEFNPLSILVQFVDYGSTAKLTLNRL 1529
Query: 778 GTLSPAFSTRVLPAQATEYAFAFIQVPQDDDART----------DAVDSVVRDIQNTQCL 827
+ P+ R PA+A + A + P D T +A+ +++ +Q Q
Sbjct: 1530 CQI-PSHLMR-YPARAIKVLLAGFKPPLRDLGETRIPYCPKWSMEALWAMIDCLQGKQ-- 1585
Query: 828 LNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGL 860
L ++ + + D + V + LV+ GL
Sbjct: 1586 LYAVSMAPAPEQIVTLYDDEQHPVHMPLVEMGL 1618
Score = 41.2 bits (95), Expect = 0.004
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 663 EQPVEEVMPVLEEKERSASYKPVFVTEIT--DDLHFYVQDVETGTQLEKLME----NMRN 716
EQ V E + E + YKP + + + V D T + KL E M N
Sbjct: 1153 EQKVSEFQEKILEPRTTRGYKPPAIPNMNVFEATVSCVGDDGTIFVVPKLSEFELIKMTN 1212
Query: 717 DIASHPPVEGSYAP---RRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLP 773
+I S+ G P ++GE C + D WYR +V +V A + V Y+D+G E +P
Sbjct: 1213 EIQSNLKCLGLLEPYFWKKGEACAVRGSDTLWYRGKVMEVVGGA-VRVQYLDHGFTEKIP 1271
Query: 774 STRL 777
L
Sbjct: 1272 QCHL 1275
Score = 33.1 bits (74), Expect = 1.2
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 28/129 (21%)
Query: 666 VEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQ---DVETGTQLEKLMENMRNDIASHP 722
+EE++ E +S + VFV+ + D HFY++ ++ LEK + N +
Sbjct: 404 IEEII----EDNVESSAELVFVSHVIDPCHFYIRKYSQIKDAKVLEKKVNEFCNRSSHLD 459
Query: 723 PVEGSYAPRRGEFCIAKFVDGEWYRARVEK-------------------VESPAKIHVFY 763
P + R ++ +G W R + + V A I +F
Sbjct: 460 PSDILELGAR--IFVSSIKNGMWCRGTITELIPIEGRNTRKPCSPTRLFVHEVALIQIFM 517
Query: 764 IDYGNREVL 772
+D+GN EVL
Sbjct: 518 VDFGNSEVL 526
>gi|58197558 tudor domain containing 6 [Homo sapiens]
Length = 2096
Score = 53.5 bits (127), Expect = 9e-07
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 685 VFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFV-DG 743
V+V+ I D FYVQ +E ++ L E + N + + P +RG+ A F D
Sbjct: 1309 VYVSHINDLSDFYVQLIEDEAEISHLSERL-NSVKTRPEYYVGPPLQRGDMICAVFPEDN 1367
Query: 744 EWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQV 803
WYRA +++ + + V +IDYGN V+ + ++G L +LP + +V
Sbjct: 1368 LWYRAVIKEQQPNDLLSVQFIDYGNVSVVHTNKIGRLD--LVNAILPGLCIHCSLQGFEV 1425
Query: 804 PQDDDAR 810
P + +++
Sbjct: 1426 PDNKNSK 1432
Score = 50.8 bits (120), Expect = 6e-06
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 27/135 (20%)
Query: 685 VFVTEITDDLHFYVQDVETG----------TQLEKLMENMRNDIASHPPVEGSYAPRRGE 734
V++T I D FY Q TQL K++ N++ + G
Sbjct: 990 VYITHIDDPWTFYCQLARNANILEQLSCSITQLSKVLLNLKTSPLNP-----------GT 1038
Query: 735 FCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTL-SPAFSTRVLPAQA 793
C+AK+ DG WYR V + E P K VF++D+GN V+ S L + S A+ +LP QA
Sbjct: 1039 LCLAKYTDGNWYRGIVIEKE-PKK--VFFVDFGNIYVVTSDDLLPIPSDAYDVLLLPMQA 1095
Query: 794 TEYAFAFI--QVPQD 806
+ + I +P++
Sbjct: 1096 VRCSLSDIPDHIPEE 1110
Score = 39.7 bits (91), Expect = 0.013
Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 25/244 (10%)
Query: 567 LPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGN--FIGWLHIDGANLSVLLVE 624
L GL G +S K L+L + V ++E + ++ DG NL+ +
Sbjct: 378 LYGLWDGGRGWSRSQVGDLKTLILGKAVNAKIEFYCSFEHVYYVSLYGEDGINLNRV--- 434
Query: 625 HALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEV-----MPVLEE-KER 678
F + +L ++ +++ E + P EEV +P L + +
Sbjct: 435 -------FGVQSCCLADRVLQSQATEEEEPE---TSQSQSPAEEVDEEISLPALRSIRLK 484
Query: 679 SASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYA-PRRGEFCI 737
++ V + + F+++ + KLM M +S ++G P + C
Sbjct: 485 MNAFYDAQVEFVKNPSEFWIRLRKHNVTFSKLMRRMCGFYSSASKLDGVVLKPEPDDLCC 544
Query: 738 AKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYA 797
K+ + +YRA V K++ + + VF +D GN E + + L P F R LP A +
Sbjct: 545 VKWKENGYYRAIVTKLDDKS-VDVFLVDRGNSENVDWYDVRMLLPQF--RQLPILAVKCT 601
Query: 798 FAFI 801
A I
Sbjct: 602 LADI 605
Score = 36.6 bits (83), Expect = 0.11
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 736 CIAK-FVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
C+AK V+ +W RA + ++S ++V ++DYG+RE++ + ++S F
Sbjct: 823 CLAKRTVNRQWSRALISGIQSVEHVNVTFVDYGDREMVSVKNIYSISEEF 872
Score = 35.0 bits (79), Expect = 0.32
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 733 GEFCIAKFVDGEWYRARVEKVESPAK-IHVFYIDYGNREVLPSTRLGTLSPAF 784
G C + +DG WYRA + + P + V ++DYG +E++ + L L P +
Sbjct: 314 GSPCASCGLDGHWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEY 366
>gi|145312259 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 48.9 bits (115), Expect = 2e-05
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 643 LLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSAS-----YKPVFVTEITDDLHFY 697
++S E + ++ + + E Q + E MP+ E S Y V+V+ HF+
Sbjct: 264 VVSKEGSWEKPSDDSFQKSEAQAIPE-MPMFEIPSPDFSFHADEYLEVYVSASEHPNHFW 322
Query: 698 VQDVETGT-QLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARVEKVES 755
+Q V + + QL+KL+ M + P + G+ A +G WYRARV
Sbjct: 323 IQIVGSRSLQLDKLVNEMTQHYENSVPED--LTVHVGDIVAAPLPTNGSWYRARVLGTLE 380
Query: 756 PAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVD 815
+ ++++D+G+ P L L F + LP QA E + A I P D +A+D
Sbjct: 381 NGNLDLYFVDFGDNGDCPLKDLRALRSDFLS--LPFQAIECSLARI-APSGDQWEEEALD 437
Query: 816 SVVRDIQNTQCLLNVEHLS-------AGCPHVTLQFADS--KGDVGLGLVKEGLVMVEVR 866
R V +S + P + L + K D+GL LV +G +E+
Sbjct: 438 EFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA-IELP 496
Query: 867 KEKQFQKVITEYLNAQESAKSARLN 891
++ + + + + L + A L+
Sbjct: 497 EDIEENRAVPDMLKDMATETDASLS 521
>gi|145312246 tudor and KH domain containing isoform b [Homo
sapiens]
Length = 516
Score = 48.9 bits (115), Expect = 2e-05
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 643 LLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSAS-----YKPVFVTEITDDLHFY 697
++S E + ++ + + E Q + E MP+ E S Y V+V+ HF+
Sbjct: 219 VVSKEGSWEKPSDDSFQKSEAQAIPE-MPMFEIPSPDFSFHADEYLEVYVSASEHPNHFW 277
Query: 698 VQDVETGT-QLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARVEKVES 755
+Q V + + QL+KL+ M + P + G+ A +G WYRARV
Sbjct: 278 IQIVGSRSLQLDKLVNEMTQHYENSVPED--LTVHVGDIVAAPLPTNGSWYRARVLGTLE 335
Query: 756 PAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVD 815
+ ++++D+G+ P L L F + LP QA E + A I P D +A+D
Sbjct: 336 NGNLDLYFVDFGDNGDCPLKDLRALRSDFLS--LPFQAIECSLARI-APSGDQWEEEALD 392
Query: 816 SVVRDIQNTQCLLNVEHLS-------AGCPHVTLQFADS--KGDVGLGLVKEGLVMVEVR 866
R V +S + P + L + K D+GL LV +G +E+
Sbjct: 393 EFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA-IELP 451
Query: 867 KEKQFQKVITEYLNAQESAKSARLN 891
++ + + + + L + A L+
Sbjct: 452 EDIEENRAVPDMLKDMATETDASLS 476
>gi|145312270 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 48.9 bits (115), Expect = 2e-05
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 643 LLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSAS-----YKPVFVTEITDDLHFY 697
++S E + ++ + + E Q + E MP+ E S Y V+V+ HF+
Sbjct: 264 VVSKEGSWEKPSDDSFQKSEAQAIPE-MPMFEIPSPDFSFHADEYLEVYVSASEHPNHFW 322
Query: 698 VQDVETGT-QLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARVEKVES 755
+Q V + + QL+KL+ M + P + G+ A +G WYRARV
Sbjct: 323 IQIVGSRSLQLDKLVNEMTQHYENSVPED--LTVHVGDIVAAPLPTNGSWYRARVLGTLE 380
Query: 756 PAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVD 815
+ ++++D+G+ P L L F + LP QA E + A I P D +A+D
Sbjct: 381 NGNLDLYFVDFGDNGDCPLKDLRALRSDFLS--LPFQAIECSLARI-APSGDQWEEEALD 437
Query: 816 SVVRDIQNTQCLLNVEHLS-------AGCPHVTLQFADS--KGDVGLGLVKEGLVMVEVR 866
R V +S + P + L + K D+GL LV +G +E+
Sbjct: 438 EFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA-IELP 496
Query: 867 KEKQFQKVITEYLNAQESAKSARLN 891
++ + + + + L + A L+
Sbjct: 497 EDIEENRAVPDMLKDMATETDASLS 521
>gi|145312256 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 48.9 bits (115), Expect = 2e-05
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 643 LLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSAS-----YKPVFVTEITDDLHFY 697
++S E + ++ + + E Q + E MP+ E S Y V+V+ HF+
Sbjct: 264 VVSKEGSWEKPSDDSFQKSEAQAIPE-MPMFEIPSPDFSFHADEYLEVYVSASEHPNHFW 322
Query: 698 VQDVETGT-QLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARVEKVES 755
+Q V + + QL+KL+ M + P + G+ A +G WYRARV
Sbjct: 323 IQIVGSRSLQLDKLVNEMTQHYENSVPED--LTVHVGDIVAAPLPTNGSWYRARVLGTLE 380
Query: 756 PAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVD 815
+ ++++D+G+ P L L F + LP QA E + A I P D +A+D
Sbjct: 381 NGNLDLYFVDFGDNGDCPLKDLRALRSDFLS--LPFQAIECSLARI-APSGDQWEEEALD 437
Query: 816 SVVRDIQNTQCLLNVEHLS-------AGCPHVTLQFADS--KGDVGLGLVKEGLVMVEVR 866
R V +S + P + L + K D+GL LV +G +E+
Sbjct: 438 EFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKLDIGLELVHKGYA-IELP 496
Query: 867 KEKQFQKVITEYLNAQESAKSARLN 891
++ + + + + L + A L+
Sbjct: 497 EDIEENRAVPDMLKDMATETDASLS 521
>gi|169163653 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 48.1 bits (113), Expect = 4e-05
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 686 FVTEITDDLHFYVQDVETGTQLEKLMENMRN--DIASHPPVEGSYAPRRGEFCIAKFV-D 742
F+ + + +F+V+ + + +++M+N+ D+ + + P G FC A++ D
Sbjct: 633 FIAYVLNPSNFWVRTNDHRNEFQEIMKNINKFYDLCENDEMI-LRKPEPGLFCCARYSKD 691
Query: 743 GEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQ 802
+YRA + ++ KI+V+++DYGN + +P + L P F LPA A + A I
Sbjct: 692 RRFYRAVITEING-YKINVYFLDYGNTDSIPFFDVKILLPEFCE--LPALAMCCSLAHI- 747
Query: 803 VPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQFADSKG--DVGLGLVKEGL 860
P +D A+D + + N LL V V +Q ++ DV +++ G
Sbjct: 748 FPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNIQSVEASENIDVISLMLQAGY 807
Query: 861 VMVEVRKEKQFQKVITEY--LNAQESAK 886
+ + F K ++EY LN++ K
Sbjct: 808 AEYFQVELEYFPKSVSEYSMLNSESKNK 835
Score = 47.4 bits (111), Expect = 6e-05
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 666 VEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVE 725
++ V+ L+ S + V V+ FY Q ++ +LE L +M +
Sbjct: 372 IQHVLDKLQPSLSVGSTESVKVSSALSPSKFYCQLIKWTPELENLTAHMTLHYDTVCQET 431
Query: 726 GSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
G C+A+ +G+W+R ++++ P ++ ++++DYG+ E +PS + L F
Sbjct: 432 SPTCDNFGLLCVARRRNGQWHRGILQQLLPPNQVKIWFMDYGSSEAIPSIYVKKLKQDF 490
Score = 41.6 bits (96), Expect = 0.003
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 681 SYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDI--ASHPPVEGSYAPRRGEFCIA 738
S + V+++ I FY Q LE + + + + P Y + CI+
Sbjct: 1111 SEEEVYISHIYSPQKFYCQLGRNNKDLEMIETKITESVNLQNFP----KYDSNKMRVCIS 1166
Query: 739 KFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
K+V DG YRA +S ++ V+++D+GN++++ L +S F
Sbjct: 1167 KYVEDGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQF 1213
Score = 39.7 bits (91), Expect = 0.013
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 663 EQPVEEVMPVLEEKERSASYKPV----FVTEITDDLHFYVQDVETGTQLEKLMENMRNDI 718
+ P + + P +++ + Y +V+ I++ +F++Q E + + +L + + N
Sbjct: 1419 QNPYDLIRPQIKDLPQPQIYLNAKVKGYVSNISNPANFHIQLAENESVIIRLADAL-NAT 1477
Query: 719 ASHPPVEGSYAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRL 777
A S P G+ +A++ D YRA ++K+ V +IDYGN ++ ++++
Sbjct: 1478 ARRLRERKSVKPLVGDLVVAEYSGDNAIYRAVIKKILPGNSFEVEFIDYGNSAIVNTSKI 1537
Query: 778 GTLSPAFST 786
L F T
Sbjct: 1538 YELQREFLT 1546
Score = 31.6 bits (70), Expect = 3.5
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 732 RGEFCIAKFVDG-EWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLP 790
+G C+AK + +W+R++VE+ K+ VF +D G E++P LS R +P
Sbjct: 1723 KGLECLAKSKNTLKWHRSKVEEKYVDDKVLVFLVDCGIYEIVPVCNTKLLSN--EIRNIP 1780
Query: 791 AQA 793
QA
Sbjct: 1781 RQA 1783
>gi|169164192 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 48.1 bits (113), Expect = 4e-05
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 686 FVTEITDDLHFYVQDVETGTQLEKLMENMRN--DIASHPPVEGSYAPRRGEFCIAKFV-D 742
F+ + + +F+V+ + + +++M+N+ D+ + + P G FC A++ D
Sbjct: 633 FIAYVLNPSNFWVRTNDHRNEFQEIMKNINKFYDLCENDEMI-LRKPEPGLFCCARYSKD 691
Query: 743 GEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQ 802
+YRA + ++ KI+V+++DYGN + +P + L P F LPA A + A I
Sbjct: 692 RRFYRAVITEING-YKINVYFLDYGNTDSIPFFDVKILLPEFCE--LPALAMCCSLAHI- 747
Query: 803 VPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQFADSKG--DVGLGLVKEGL 860
P +D A+D + + N LL V V +Q ++ DV +++ G
Sbjct: 748 FPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNIQSVEASENIDVISLMLQAGY 807
Query: 861 VMVEVRKEKQFQKVITEY--LNAQESAK 886
+ + F K ++EY LN++ K
Sbjct: 808 AEYFQVELEYFPKSVSEYSMLNSESKNK 835
Score = 47.4 bits (111), Expect = 6e-05
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 666 VEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVE 725
++ V+ L+ S + V V+ FY Q ++ +LE L +M +
Sbjct: 372 IQHVLDKLQPSLSVGSTESVKVSSALSPSKFYCQLIKWTPELENLTAHMTLHYDTVCQET 431
Query: 726 GSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
G C+A+ +G+W+R ++++ P ++ ++++DYG+ E +PS + L F
Sbjct: 432 SPTCDNFGLLCVARRRNGQWHRGILQQLLPPNQVKIWFMDYGSSEAIPSIYVKKLKQDF 490
Score = 41.6 bits (96), Expect = 0.003
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 681 SYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDI--ASHPPVEGSYAPRRGEFCIA 738
S + V+++ I FY Q LE + + + + P Y + CI+
Sbjct: 1111 SEEEVYISHIYSPQKFYCQLGRNNKDLEMIETKITESVNLQNFP----KYDSNKMRVCIS 1166
Query: 739 KFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
K+V DG YRA +S ++ V+++D+GN++++ L +S F
Sbjct: 1167 KYVEDGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQF 1213
Score = 39.7 bits (91), Expect = 0.013
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 663 EQPVEEVMPVLEEKERSASYKPV----FVTEITDDLHFYVQDVETGTQLEKLMENMRNDI 718
+ P + + P +++ + Y +V+ I++ +F++Q E + + +L + + N
Sbjct: 1419 QNPYDLIRPQIKDLPQPQIYLNAKVKGYVSNISNPANFHIQLAENESVIIRLADAL-NAT 1477
Query: 719 ASHPPVEGSYAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRL 777
A S P G+ +A++ D YRA ++K+ V +IDYGN ++ ++++
Sbjct: 1478 ARRLRERKSVKPLVGDLVVAEYSGDNAIYRAVIKKILPGNSFEVEFIDYGNSAIVNTSKI 1537
Query: 778 GTLSPAFST 786
L F T
Sbjct: 1538 YELQREFLT 1546
Score = 31.6 bits (70), Expect = 3.5
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 732 RGEFCIAKFVDG-EWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLP 790
+G C+AK + +W+R++VE+ K+ VF +D G E++P LS R +P
Sbjct: 1723 KGLECLAKSKNTLKWHRSKVEEKYVDDKVLVFLVDCGIYEIVPVCNTKLLSN--EIRNIP 1780
Query: 791 AQA 793
QA
Sbjct: 1781 RQA 1783
>gi|169163210 PREDICTED: similar to tudor domain containing 1 [Homo
sapiens]
Length = 2080
Score = 48.1 bits (113), Expect = 4e-05
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 686 FVTEITDDLHFYVQDVETGTQLEKLMENMRN--DIASHPPVEGSYAPRRGEFCIAKFV-D 742
F+ + + +F+V+ + + +++M+N+ D+ + + P G FC A++ D
Sbjct: 633 FIAYVLNPSNFWVRTNDHRNEFQEIMKNINKFYDLCENDEMI-LRKPEPGLFCCARYSKD 691
Query: 743 GEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQ 802
+YRA + ++ KI+V+++DYGN + +P + L P F LPA A + A I
Sbjct: 692 RRFYRAVITEING-YKINVYFLDYGNTDSIPFFDVKILLPEFCE--LPALAMCCSLAHI- 747
Query: 803 VPQDDDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQFADSKG--DVGLGLVKEGL 860
P +D A+D + + N LL V V +Q ++ DV +++ G
Sbjct: 748 FPVEDLWTKAAIDYFKKLVLNKAILLQVIAKKDDKYTVNIQSVEASENIDVISLMLQAGY 807
Query: 861 VMVEVRKEKQFQKVITEY--LNAQESAK 886
+ + F K ++EY LN++ K
Sbjct: 808 AEYFQVELEYFPKSVSEYSMLNSESKNK 835
Score = 47.4 bits (111), Expect = 6e-05
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 666 VEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVE 725
++ V+ L+ S + V V+ FY Q ++ +LE L +M +
Sbjct: 372 IQHVLDKLQPSLSVGSTESVKVSSALSPSKFYCQLIKWTPELENLTAHMTLHYDTVCQET 431
Query: 726 GSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
G C+A+ +G+W+R ++++ P ++ ++++DYG+ E +PS + L F
Sbjct: 432 SPTCDNFGLLCVARRRNGQWHRGILQQLLPPNQVKIWFMDYGSSEAIPSIYVKKLKQDF 490
Score = 41.6 bits (96), Expect = 0.003
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 681 SYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDI--ASHPPVEGSYAPRRGEFCIA 738
S + V+++ I FY Q LE + + + + P Y + CI+
Sbjct: 1111 SEEEVYISHIYSPQKFYCQLGRNNKDLEMIETKITESVNLQNFP----KYDSNKMRVCIS 1166
Query: 739 KFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAF 784
K+V DG YRA +S ++ V+++D+GN++++ L +S F
Sbjct: 1167 KYVEDGLSYRALAIPTDSSSEFQVYFVDFGNKQLVGENMLRAISAQF 1213
Score = 39.7 bits (91), Expect = 0.013
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 663 EQPVEEVMPVLEEKERSASYKPV----FVTEITDDLHFYVQDVETGTQLEKLMENMRNDI 718
+ P + + P +++ + Y +V+ I++ +F++Q E + + +L + + N
Sbjct: 1419 QNPYDLIRPQIKDLPQPQIYLNAKVKGYVSNISNPANFHIQLAENESVIIRLADAL-NAT 1477
Query: 719 ASHPPVEGSYAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRL 777
A S P G+ +A++ D YRA ++K+ V +IDYGN ++ ++++
Sbjct: 1478 ARRLRERKSVKPLVGDLVVAEYSGDNAIYRAVIKKILPGNSFEVEFIDYGNSAIVNTSKI 1537
Query: 778 GTLSPAFST 786
L F T
Sbjct: 1538 YELQREFLT 1546
Score = 31.6 bits (70), Expect = 3.5
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 732 RGEFCIAKFVDG-EWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLP 790
+G C+AK + +W+R++VE+ K+ VF +D G E++P LS R +P
Sbjct: 1723 KGLECLAKSKNTLKWHRSKVEEKYVDDKVLVFLVDCGIYEIVPVCNTKLLSN--EIRNIP 1780
Query: 791 AQA 793
QA
Sbjct: 1781 RQA 1783
>gi|112293287 tudor domain containing 7 [Homo sapiens]
Length = 1098
Score = 45.8 bits (107), Expect = 2e-04
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 669 VMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSY 728
V P++ E S S V ++ + + YV + Q E + + M+ + +P +
Sbjct: 454 VPPLMIPTEASPSVLVVELSNTNEVVIRYVGKDYSAAQ-ELMEDEMKEYYSKNPKITPVQ 512
Query: 729 APRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRV 788
A G+ + W RA+V E KI V Y+DYG E + ++ L+P F +
Sbjct: 513 AVNVGQLLAVNAEEDAWLRAQVISTEEN-KIKVCYVDYGFSENVEKSKAYKLNPKFCS-- 569
Query: 789 LPAQATEYAFAFIQVPQDDDARTDAVDSV 817
L QAT+ A ++V DD V+S+
Sbjct: 570 LSFQATKCKLAGLEVLSDDPDLVKVVESL 598
Score = 36.6 bits (83), Expect = 0.11
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 654 KEKVWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMEN 713
K+ + H EE+ P + + + V+V +F +Q + +LE LME
Sbjct: 886 KKSMVDHTSAFSTEELPPPVH-LSKPGEHMDVYVPVACHPGYFVIQPWQEIHKLEVLMEE 944
Query: 714 MRNDIASHPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVLP 773
M I + E + + A V+ +W+R ++ + + + V+ +DYG E++
Sbjct: 945 M---ILYYSVSEERHIAVEKDQVYAAKVENKWHRVLLKGILTNGLVSVYELDYGKHELVN 1001
Query: 774 STRLGTLSPAFSTRVLPAQATEYAFAFIQVPQ 805
++ L F R LP QA A ++ Q
Sbjct: 1002 IRKVQPLVDMF--RKLPFQAVTAQLAGVKCNQ 1031
>gi|40255178 tudor domain containing 5 [Homo sapiens]
Length = 981
Score = 44.3 bits (103), Expect = 5e-04
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 685 VFVTEITDDLHFYVQ--DVETGTQLEKLMENMR----NDIASHPPVEGSYAPRRGEFCIA 738
VFV I FY++ ++ LE +M MR N + S V + G C
Sbjct: 475 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQPGHLCCV 534
Query: 739 KFVDGEW-YRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYA 797
+ + +W YR + +V ++ VFY D+GN ++ + L L ++ LPAQA +
Sbjct: 535 RISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTK--LPAQAIPCS 592
Query: 798 FAFIQ 802
A+++
Sbjct: 593 LAWVR 597
>gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens]
Length = 903
Score = 40.8 bits (94), Expect = 0.006
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 736 CIAKFVDGEWYRAR-VEKVESPAKIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQAT 794
C A DG W+RA+ V E ++ + Y+DYG + + L + F T LP Q
Sbjct: 765 CAAPGADGAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVT--LPFQGA 822
Query: 795 EYAFAFIQVPQDDDARTDAVDSVVRDIQ-NTQCLLNVEHLS-AGCPHVTL--QFADSKGD 850
E + DDD + D+ + ++ NT L V S G P + L D
Sbjct: 823 EVLLDSVMPLSDDDQFSPEADAAMSEMTGNTALLAQVTSYSPTGLPLIQLWSVVGDEVVL 882
Query: 851 VGLGLVKEGL 860
+ LV+ GL
Sbjct: 883 INRSLVERGL 892
>gi|170784859 serine/threonine kinase 31 isoform b [Homo sapiens]
Length = 996
Score = 38.5 bits (88), Expect = 0.029
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 673 LEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRR 732
++E + V + I D + F+ Q + + K+ ++ V G+ P +
Sbjct: 1 MDEDTHYDKVEDVVGSHIEDAVTFWAQSINRNKDIMKIGCSLSEVCPQASSVLGNLDPNK 60
Query: 733 ---GEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVL 772
G F D WYR +V K+ S K V YIDYGN E+L
Sbjct: 61 IYGGLFS----EDQCWYRCKVLKIISVEKCLVRYIDYGNTEIL 99
>gi|14602443 serine/threonine kinase 31 isoform a [Homo sapiens]
Length = 1019
Score = 38.5 bits (88), Expect = 0.029
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 673 LEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRR 732
++E + V + I D + F+ Q + + K+ ++ V G+ P +
Sbjct: 24 MDEDTHYDKVEDVVGSHIEDAVTFWAQSINRNKDIMKIGCSLSEVCPQASSVLGNLDPNK 83
Query: 733 ---GEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVL 772
G F D WYR +V K+ S K V YIDYGN E+L
Sbjct: 84 IYGGLFS----EDQCWYRCKVLKIISVEKCLVRYIDYGNTEIL 122
>gi|170784856 serine/threonine kinase 31 isoform b [Homo sapiens]
Length = 996
Score = 38.5 bits (88), Expect = 0.029
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 673 LEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRR 732
++E + V + I D + F+ Q + + K+ ++ V G+ P +
Sbjct: 1 MDEDTHYDKVEDVVGSHIEDAVTFWAQSINRNKDIMKIGCSLSEVCPQASSVLGNLDPNK 60
Query: 733 ---GEFCIAKFVDGEWYRARVEKVESPAKIHVFYIDYGNREVL 772
G F D WYR +V K+ S K V YIDYGN E+L
Sbjct: 61 IYGGLFS----EDQCWYRCKVLKIISVEKCLVRYIDYGNTEIL 99
>gi|166851804 tudor domain containing 9 [Homo sapiens]
Length = 1382
Score = 36.2 bits (82), Expect = 0.14
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 650 AKQKKEKVWAHYEEQPVEEVMPVLEEKERSASYKPVF----VTEITDDLHFYVQDVETGT 705
+K + +V +++Q V+ + +RS + + VTE+ + HF+ ++
Sbjct: 863 SKLRNTRVNVDFQKQTVDPMQVSFNTSDRSQTVTDLLLTIDVTEVVEVGHFWGYRIDENN 922
Query: 706 QLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFVDGE---WYRARVEKVESPAKIHVF 762
++++ + +I V P C+A F D + ++RA+V V S VF
Sbjct: 923 S--EILKKLTAEINQLTLVPLPTHPHPDLVCLAPFADFDKQRYFRAQVLYV-SGNSAEVF 979
Query: 763 YIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEY 796
++DYGN+ + L + F LP QA E+
Sbjct: 980 FVDYGNKSHVDLHLLMEIPCQFLE--LPFQALEF 1011
>gi|28416940 Shwachman-Bodian-Diamond syndrome protein [Homo
sapiens]
Length = 250
Score = 35.0 bits (79), Expect = 0.32
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 619 SVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKER 678
+V+L+E A+ +H++ + + K A E KQ KEK+ + ++PV E K+
Sbjct: 129 TVILIERAMKDIHYSVKTNKSTKQ--QALEVIKQLKEKMKIERAHMRLRFILPVNEGKKL 186
Query: 679 SASYKPVFVTEITDDLHFYVQDVE 702
KP+ ++D Y Q +E
Sbjct: 187 KEKLKPLIKVIESED---YGQQLE 207
>gi|189571674 cadherin-like 23 isoform 1 precursor [Homo sapiens]
Length = 3354
Score = 33.1 bits (74), Expect = 1.2
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 447 GINIAEALVSKGLATVIRYRQDDDQRS--SHYDELLAAEARAIKNGKGLHSKKEVPIHRV 504
GI++ LAT + ++DQ+ + L AAEA A + S K P+H++
Sbjct: 3281 GIHVVHGSTGTLLATDLNSLPEEDQKGLGRSLETLTAAEATAFERNARTESAKSTPLHKL 3340
Query: 505 ADISGDT 511
D+ +T
Sbjct: 3341 RDVIMET 3347
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 32.0 bits (71), Expect = 2.7
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 18/65 (27%)
Query: 37 GQPRGGPPPERQINLS-----NIRAGNLARRA-------------AATQPDAKDTPDEPW 78
GQPR GPPP R S R+ L+RR+ A+ PD D PD
Sbjct: 32 GQPRLGPPPRRARRFSGKAEPRPRSSRLSRRSSVDLGLLSSWSLPASPAPDPPDPPDSAG 91
Query: 79 AFPAR 83
PAR
Sbjct: 92 PGPAR 96
>gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens]
Length = 2156
Score = 31.6 bits (70), Expect = 3.5
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 595 EVEVESMDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKK 654
E +V S++ A ++ LH + LS + +K H AE+S K L+ E +K+
Sbjct: 1006 ETQVGSLNDA--YLVPLH-EHCTLSQSAINDHNTKSHIAAEKSGPEKKLVYQEINLARKR 1062
Query: 655 EKVWAHYEEQPVEE-----VMPVLEEKERSASYKPVFVTE 689
+ V A + P+EE ++PVL + AS + T+
Sbjct: 1063 QSVEAAIQVDPIEEETPKDLLPVLMLHQLQASVPGIHKTQ 1102
>gi|9910266 kinesin family member 15 [Homo sapiens]
Length = 1388
Score = 30.8 bits (68), Expect = 6.0
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 24/117 (20%)
Query: 625 HALSKVHFTAERSSYYKSLLSA--EEAAK-------------QKKEKVWA-----HYEEQ 664
HA +++ E S + LL + EE K QKKE+V +++ +
Sbjct: 1067 HATEQLNMLTEASKKHSGLLQSAQEELTKKEALIQELQHKLNQKKEEVEQKKNEYNFKMR 1126
Query: 665 PVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETG----TQLEKLMENMRND 717
+E VM E +S P F T + L Q++E G T LE L+ + D
Sbjct: 1127 QLEHVMDSAAEDPQSPKTPPHFQTHLAKLLETQEQEIEDGRASKTSLEHLVTKLNED 1183
>gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
Length = 2430
Score = 30.8 bits (68), Expect = 6.0
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 506 DISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKL-YLPKETCLITFLLAGIE 559
D+SG+ + +LPF R+ E ++ V + +KL + KE C TFL +E
Sbjct: 2137 DVSGEATAQEMYLPFPGRSASYEDIIIDVCTNLHVKLRSVVKEACKSTFLFYLVE 2191
>gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens]
Length = 1621
Score = 30.4 bits (67), Expect = 7.8
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 465 YRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRA 524
Y Q + S+ +D A GL +VP VA G + + +P +RA
Sbjct: 1448 YSQKSEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKG--KPSSDTVPKPKRA 1505
Query: 525 GRSEAVVEYVFSGSRLKLYLPKET 548
+ + VVE V S S + +PK+T
Sbjct: 1506 PKQKKVVEAVNSDSDSEFGIPKKT 1529
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 30.4 bits (67), Expect = 7.8
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 576 PFSEEATLFTKELVLQREVEVEVE-------SMDKAGNFIGWLHIDGANLSVL--LVEHA 626
P +EEA+LF K LVL+ E +E E S+ K N H + + L L L E +
Sbjct: 146 PNTEEASLFRKPLVLKEEPTIEDETLINKSLSLKKCSN-----HEEVSLLEKLQPLQEES 200
Query: 627 LSKVHFTAERSSYYKSLLSAEEAAKQK----KEKVWAHYEEQPVEE 668
S F E ++ K+ + E A +K K+K+ A +Q +E
Sbjct: 201 DSDDAFVIEPMTFKKTHKTEEAAITKKTLSLKKKMCASQRKQSCQE 246
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo
sapiens]
Length = 1235
Score = 30.4 bits (67), Expect = 7.8
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 675 EKERSASYKPVFVTEITDDLHFYVQDV-ETGTQLEKL--MENMRNDIASHPPVEGSYAPR 731
+ E S + P F E++ D+ F+ + +G LE L + +R ++ S V S+
Sbjct: 725 DTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVG 784
Query: 732 RGEFCIA-----KFVDGEWYRARVEKVESPAKIHV 761
G F I+ F D +W+ RVE+ A + V
Sbjct: 785 NGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQV 819
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
Length = 1308
Score = 30.4 bits (67), Expect = 7.8
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 675 EKERSASYKPVFVTEITDDLHFYVQDV-ETGTQLEKL--MENMRNDIASHPPVEGSYAPR 731
+ E S + P F E++ D+ F+ + +G LE L + +R ++ S V S+
Sbjct: 798 DTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVG 857
Query: 732 RGEFCIA-----KFVDGEWYRARVEKVESPAKIHV 761
G F I+ F D +W+ RVE+ A + V
Sbjct: 858 NGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQV 892
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,138,798
Number of Sequences: 37866
Number of extensions: 1559035
Number of successful extensions: 4314
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4244
Number of HSP's gapped (non-prelim): 64
length of query: 910
length of database: 18,247,518
effective HSP length: 111
effective length of query: 799
effective length of database: 14,044,392
effective search space: 11221469208
effective search space used: 11221469208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.