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Search of human proteins with 14043026
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14043026 vesicle-associated membrane protein 8 [Homo
sapiens]
(100 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14043026 vesicle-associated membrane protein 8 [Homo sapiens] 199 5e-52
gi|172072620 vesicle-associated membrane protein 2 (synaptobrevi... 75 9e-15
gi|223468574 vesicle-associated membrane protein 7 isoform 2 [Ho... 74 2e-14
gi|5032137 vesicle-associated membrane protein 7 isoform 1 [Homo... 74 2e-14
gi|7657673 vesicle-associated membrane protein 1 isoform 1 [Homo... 71 2e-13
gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens] 71 2e-13
gi|40549446 vesicle-associated membrane protein 1 isoform 2 [Hom... 69 6e-13
gi|9257251 vesicle-associated membrane protein 1 isoform 3 [Homo... 69 6e-13
gi|42544207 vesicle-associated membrane protein 4 [Homo sapiens] 69 8e-13
gi|5730112 vesicle-associated membrane protein 5 [Homo sapiens] 49 9e-07
gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo sa... 39 9e-04
gi|5730120 YKT6 v-SNARE protein [Homo sapiens] 37 0.004
gi|21426793 amisyn [Homo sapiens] 35 0.017
gi|195976821 dysferlin isoform 2 [Homo sapiens] 34 0.028
gi|4503431 dysferlin isoform 8 [Homo sapiens] 34 0.028
gi|195976779 dysferlin isoform 1 [Homo sapiens] 34 0.028
gi|195976777 dysferlin isoform 3 [Homo sapiens] 34 0.028
gi|195976775 dysferlin isoform 4 [Homo sapiens] 34 0.028
gi|195976773 dysferlin isoform 5 [Homo sapiens] 34 0.028
gi|195976769 dysferlin isoform 6 [Homo sapiens] 34 0.028
gi|195976766 dysferlin isoform 7 [Homo sapiens] 34 0.028
gi|195976764 dysferlin isoform 14 [Homo sapiens] 34 0.028
gi|195976762 dysferlin isoform 13 [Homo sapiens] 34 0.028
gi|195976760 dysferlin isoform 12 [Homo sapiens] 34 0.028
gi|195976758 dysferlin isoform 11 [Homo sapiens] 34 0.028
gi|195976756 dysferlin isoform 10 [Homo sapiens] 34 0.028
gi|195976754 dysferlin isoform 9 [Homo sapiens] 34 0.028
gi|119120884 fer-1-like 6 [Homo sapiens] 32 0.11
gi|37577287 syntaxin 2 isoform 1 [Homo sapiens] 32 0.14
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 32 0.14
>gi|14043026 vesicle-associated membrane protein 8 [Homo sapiens]
Length = 100
Score = 199 bits (505), Expect = 5e-52
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 1 MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT 60
MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT
Sbjct: 1 MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT 60
Query: 61 TSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS 100
TSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS
Sbjct: 61 TSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS 100
>gi|172072620 vesicle-associated membrane protein 2 (synaptobrevin
2) [Homo sapiens]
Length = 116
Score = 75.5 bits (184), Expect = 9e-15
Identities = 35/100 (35%), Positives = 65/100 (65%), Gaps = 9/100 (9%)
Query: 4 ASEGG---------GNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEAT 54
A EGG N R++ Q++V+ V +IM NV+++L R + L L ++ + L+A
Sbjct: 14 AGEGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAG 73
Query: 55 SEHFKTTSQKVARKFWWKNVKMIVLICVIVFIIILFIVLF 94
+ F+T++ K+ RK+WWKN+KM++++ VI II++ I+++
Sbjct: 74 ASQFETSAAKLKRKYWWKNLKMMIILGVICAIILIIIIVY 113
>gi|223468574 vesicle-associated membrane protein 7 isoform 2 [Homo
sapiens]
Length = 179
Score = 74.3 bits (181), Expect = 2e-14
Identities = 38/100 (38%), Positives = 62/100 (62%)
Query: 1 MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT 60
++ SE G D+V Q++V+ +K IM +N++ + RGE LE L +KTE+L +S FKT
Sbjct: 73 LKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKT 132
Query: 61 TSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS 100
TS+ +AR KN+K+ ++I ++ + I IV G F+
Sbjct: 133 TSRNLARAMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFT 172
>gi|5032137 vesicle-associated membrane protein 7 isoform 1 [Homo
sapiens]
Length = 220
Score = 74.3 bits (181), Expect = 2e-14
Identities = 38/100 (38%), Positives = 62/100 (62%)
Query: 1 MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT 60
++ SE G D+V Q++V+ +K IM +N++ + RGE LE L +KTE+L +S FKT
Sbjct: 114 LKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKT 173
Query: 61 TSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS 100
TS+ +AR KN+K+ ++I ++ + I IV G F+
Sbjct: 174 TSRNLARAMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFT 213
>gi|7657673 vesicle-associated membrane protein 1 isoform 1 [Homo
sapiens]
Length = 118
Score = 71.2 bits (173), Expect = 2e-13
Identities = 30/85 (35%), Positives = 59/85 (69%)
Query: 10 NDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKF 69
N R++ Q++VE V +I+ NV+++L R + L L ++ + L+A + F++++ K+ RK+
Sbjct: 31 NRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKY 90
Query: 70 WWKNVKMIVLICVIVFIIILFIVLF 94
WWKN KM++++ I II++ IV++
Sbjct: 91 WWKNCKMMIMLGAICAIIVVVIVIY 115
>gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens]
Length = 100
Score = 70.9 bits (172), Expect = 2e-13
Identities = 32/86 (37%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 8 GGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVAR 67
G N R++ Q++V+ V +IM NV+++L R + L L ++ + L+A + F+T++ K+ R
Sbjct: 10 GSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKR 69
Query: 68 KFWWKNVKM--IVLICVIVFIIILFI 91
K+WWKN KM I + +++FIII+ +
Sbjct: 70 KYWWKNCKMWAIGITVLVIFIIIIIV 95
>gi|40549446 vesicle-associated membrane protein 1 isoform 2 [Homo
sapiens]
Length = 117
Score = 69.3 bits (168), Expect = 6e-13
Identities = 30/83 (36%), Positives = 57/83 (68%)
Query: 10 NDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKF 69
N R++ Q++VE V +I+ NV+++L R + L L ++ + L+A + F++++ K+ RK+
Sbjct: 31 NRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKY 90
Query: 70 WWKNVKMIVLICVIVFIIILFIV 92
WWKN KM++++ I II++ IV
Sbjct: 91 WWKNCKMMIMLGAICAIIVVVIV 113
>gi|9257251 vesicle-associated membrane protein 1 isoform 3 [Homo
sapiens]
Length = 116
Score = 69.3 bits (168), Expect = 6e-13
Identities = 30/83 (36%), Positives = 57/83 (68%)
Query: 10 NDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKF 69
N R++ Q++VE V +I+ NV+++L R + L L ++ + L+A + F++++ K+ RK+
Sbjct: 31 NRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKY 90
Query: 70 WWKNVKMIVLICVIVFIIILFIV 92
WWKN KM++++ I II++ IV
Sbjct: 91 WWKNCKMMIMLGAICAIIVVVIV 113
>gi|42544207 vesicle-associated membrane protein 4 [Homo sapiens]
Length = 141
Score = 68.9 bits (167), Expect = 8e-13
Identities = 25/87 (28%), Positives = 59/87 (67%)
Query: 7 GGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVA 66
G ND+++++Q++V+ V ++M +N+ +++ RGE L+ L++K+E L + F S+++
Sbjct: 47 GPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLR 106
Query: 67 RKFWWKNVKMIVLICVIVFIIILFIVL 93
R+ WW+ K+ ++ ++ I++L I++
Sbjct: 107 RQMWWRGCKIKAIMALVAAILLLVIII 133
>gi|5730112 vesicle-associated membrane protein 5 [Homo sapiens]
Length = 116
Score = 48.9 bits (115), Expect = 9e-07
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 17 QSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNVKM 76
Q + V IM N ++L RG L L+ +++ L S F T+Q +A+K W+N++
Sbjct: 10 QQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWENIRY 69
Query: 77 -----IVLICVIVFIIILFIVLF 94
+V++ V++ I+I+ +V+F
Sbjct: 70 RICVGLVVVGVLLIILIVLLVVF 92
>gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo
sapiens]
Length = 215
Score = 38.9 bits (89), Expect = 9e-04
Identities = 16/76 (21%), Positives = 42/76 (55%)
Query: 15 NLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74
++ +E++ V+ IM N+E +L RGE L L +K +L + S+ ++ ++ + + +
Sbjct: 137 SINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMHSTYAKL 196
Query: 75 KMIVLICVIVFIIILF 90
+ + +++ + + F
Sbjct: 197 AAVAVFFIMLIVYVRF 212
>gi|5730120 YKT6 v-SNARE protein [Homo sapiens]
Length = 198
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 11 DRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQK 64
D + +Q+E++ K I+ +E +L RGE L+ L +K+E L S+ F T++K
Sbjct: 137 DPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>gi|21426793 amisyn [Homo sapiens]
Length = 210
Score = 34.7 bits (78), Expect = 0.017
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 8 GGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVAR 67
GGN L S + V + + + + + RGE L KTEDL+ +++ F T+ K+A
Sbjct: 150 GGNSI---LHSAADSVTSAVQKASQALNERGERLGRAEEKTEDLKNSAQQFAETAHKLAM 206
Query: 68 K 68
K
Sbjct: 207 K 207
>gi|195976821 dysferlin isoform 2 [Homo sapiens]
Length = 2081
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 1996 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2055
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2056 ILLLFLAIF 2064
>gi|4503431 dysferlin isoform 8 [Homo sapiens]
Length = 2080
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 1995 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2054
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2055 ILLLFLAIF 2063
>gi|195976779 dysferlin isoform 1 [Homo sapiens]
Length = 2119
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2034 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2093
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2094 ILLLFLAIF 2102
>gi|195976777 dysferlin isoform 3 [Homo sapiens]
Length = 2067
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 1982 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2041
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2042 ILLLFLAIF 2050
>gi|195976775 dysferlin isoform 4 [Homo sapiens]
Length = 2098
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2013 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2072
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2073 ILLLFLAIF 2081
>gi|195976773 dysferlin isoform 5 [Homo sapiens]
Length = 2088
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2003 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2062
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2063 ILLLFLAIF 2071
>gi|195976769 dysferlin isoform 6 [Homo sapiens]
Length = 2102
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2017 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2076
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2077 ILLLFLAIF 2085
>gi|195976766 dysferlin isoform 7 [Homo sapiens]
Length = 2112
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2027 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2086
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2087 ILLLFLAIF 2095
>gi|195976764 dysferlin isoform 14 [Homo sapiens]
Length = 2118
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2033 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2092
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2093 ILLLFLAIF 2101
>gi|195976762 dysferlin isoform 13 [Homo sapiens]
Length = 2097
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2012 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2071
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2072 ILLLFLAIF 2080
>gi|195976760 dysferlin isoform 12 [Homo sapiens]
Length = 2111
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2026 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2085
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2086 ILLLFLAIF 2094
>gi|195976758 dysferlin isoform 11 [Homo sapiens]
Length = 2101
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2016 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2075
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2076 ILLLFLAIF 2084
>gi|195976756 dysferlin isoform 10 [Homo sapiens]
Length = 2087
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 2002 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2061
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2062 ILLLFLAIF 2070
>gi|195976754 dysferlin isoform 9 [Homo sapiens]
Length = 2066
Score = 33.9 bits (76), Expect = 0.028
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 28 TQNVERILARGENLEHLRNKTEDLEATSEHFK--TTSQKVARKFWWKNVKMIVLICVIVF 85
+++ ER +G + ++ K ED F T+ K + W+ + +++ +I+F
Sbjct: 1981 SEHEERPAGQGRDEPNMNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILF 2040
Query: 86 IIILFIVLF 94
I++LF+ +F
Sbjct: 2041 ILLLFLAIF 2049
>gi|119120884 fer-1-like 6 [Homo sapiens]
Length = 1857
Score = 32.0 bits (71), Expect = 0.11
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 71 WKNVKMIVLICVIVFIIILFIVLF 94
WKN K ++I I+ I+I+F+VLF
Sbjct: 1818 WKNYKKYIIIAFILIILIIFLVLF 1841
>gi|37577287 syntaxin 2 isoform 1 [Homo sapiens]
Length = 287
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 13 VRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWK 72
+ L++ + + + + +GE + ++ + EH K ++K A K+ K
Sbjct: 201 IMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNATDYVEHAKEETKK-AIKYQSK 259
Query: 73 NVK--MIVLICVIVFIIILFIVLFAT 96
+ M ++ICVIV ++IL I+L T
Sbjct: 260 ARRKLMFIIICVIVLLVILGIILATT 285
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 16 LQSEVEGVKNIMTQNVERILA-----RGENLEHLRNKTEDLEATSEHFKTTSQKVARK 68
L+ ++ G K + Q+ +++LA RGE EH +LEA F ++K+AR+
Sbjct: 488 LREQLSGYKRMRRQHQKQLLALESRLRGEREEHSARLQRELEAQRAGFGAEAEKLARR 545
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,939,858
Number of Sequences: 37866
Number of extensions: 93159
Number of successful extensions: 633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 565
Number of HSP's gapped (non-prelim): 75
length of query: 100
length of database: 18,247,518
effective HSP length: 71
effective length of query: 29
effective length of database: 15,559,032
effective search space: 451211928
effective search space used: 451211928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.