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Search of human proteins with 7662020
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662020 hypothetical protein LOC9766 [Homo sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662020 hypothetical protein LOC9766 [Homo sapiens] 615 e-176
gi|148539593 sushi domain containing 4 isoform a [Homo sapiens] 132 4e-31
gi|148886654 polydom [Homo sapiens] 40 0.002
gi|62739186 complement factor H isoform a precursor [Homo sapiens] 38 0.010
gi|118442839 complement factor H-related 1 [Homo sapiens] 38 0.010
gi|239758115 PREDICTED: similar to complement factor H-related 1... 38 0.010
gi|239758113 PREDICTED: similar to complement factor H-related 1... 38 0.010
gi|62739188 complement factor H isoform b precursor [Homo sapiens] 36 0.048
gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo sap... 36 0.048
gi|205277354 CUB and Sushi multiple domains 3 isoform 3 [Homo sa... 36 0.048
gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo sap... 36 0.048
gi|5031695 H factor (complement)-like 3 [Homo sapiens] 36 0.048
gi|86793109 complement receptor 1 isoform S precursor [Homo sapi... 35 0.063
gi|86793036 complement receptor 1 isoform F precursor [Homo sapi... 35 0.063
gi|42544177 complement component (3d/Epstein Barr virus) recepto... 35 0.063
gi|54792123 complement component (3d/Epstein Barr virus) recepto... 35 0.063
gi|134254450 patched isoform S [Homo sapiens] 35 0.063
gi|134254435 patched isoform S [Homo sapiens] 35 0.063
gi|134254468 patched isoform S [Homo sapiens] 35 0.063
gi|134254452 patched isoform S [Homo sapiens] 35 0.063
gi|134254432 patched isoform L' [Homo sapiens] 35 0.063
gi|134254466 patched isoform M [Homo sapiens] 35 0.063
gi|134254446 patched isoform L [Homo sapiens] 35 0.063
gi|5454086 sushi-repeat-containing protein, X-linked [Homo sapiens] 35 0.063
gi|56117838 secreted frizzled-related protein 1 [Homo sapiens] 35 0.082
gi|110611237 coagulation factor XIII B subunit precursor [Homo s... 35 0.082
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo... 34 0.14
gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isofor... 34 0.14
gi|153266841 apolipoprotein H precursor [Homo sapiens] 34 0.14
gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens] 34 0.14
>gi|7662020 hypothetical protein LOC9766 [Homo sapiens]
Length = 303
Score = 615 bits (1587), Expect = e-176
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPC 60
MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPC
Sbjct: 1 MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPC 60
Query: 61 RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLS 120
RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLS
Sbjct: 61 RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLS 120
Query: 121 IVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEA 180
IVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEA
Sbjct: 121 IVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEA 180
Query: 181 VYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCE 240
VYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCE
Sbjct: 181 VYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCE 240
Query: 241 AWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPLL 300
AWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPLL
Sbjct: 241 AWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPLL 300
Query: 301 KEA 303
KEA
Sbjct: 301 KEA 303
>gi|148539593 sushi domain containing 4 isoform a [Homo sapiens]
Length = 490
Score = 132 bits (332), Expect = 4e-31
Identities = 82/204 (40%), Positives = 113/204 (55%), Gaps = 16/204 (7%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEI 100
VCPLPP +G ++CHPRPC + G+V+E+ C GY L DYKY+TC+ GEW P+ ++
Sbjct: 242 VCPLPPMVSHGDFVCHPRPC-ERYNHGTVVEFYCDPGYSLTSDYKYITCQYGEWFPSYQV 300
Query: 101 SCRLNED--KDTHTSLGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSR-RDQG 157
C +E TH +L + T IVA TA+SV L+LLLV+L + Q K K+ R +
Sbjct: 301 YCIKSEQTWPSTHETL-LTTWKIVAFTATSVLLVLLLVILARMFQTKFKAHFPPRGPPRS 359
Query: 158 VSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQL 217
S D ++VDGV V LPSY+EAV G P + S G G +P + Q
Sbjct: 360 SSSDPDFVVVDGVPVMLPSYDEAVSGGLSALGP------GYMASVG---QGCPLPVDDQS 410
Query: 218 PDQGACSSAGGEDEAPGQSGLCEA 241
P A +G D PG+S C++
Sbjct: 411 PP--AYPGSGDTDTGPGESETCDS 432
Score = 31.6 bits (70), Expect = 0.91
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 13/78 (16%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCK--NGE--WKP 96
VC P PENG P GSV + C +G+ LKG K L K NG W P
Sbjct: 56 VCADPGIPENG----FRTPSGGVFFEGSVARFHCQDGFKLKGATKRLCLKHFNGTLGWIP 111
Query: 97 A-----MEISCRLNEDKD 109
+ ++ CR+ + +D
Sbjct: 112 SDNSICVQEDCRIPQIED 129
>gi|148886654 polydom [Homo sapiens]
Length = 3571
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK----PA 97
C +PP ENG + D AGS + Y C GY L GD + NG W
Sbjct: 1690 CGVPPPLENGFHSA------DDFYAGSTVTYQCNNGYYLLGDSRMFCTDNGSWNGVSPSC 1743
Query: 98 MEI-SCRLNEDKDTHTS 113
+++ C + D H S
Sbjct: 1744 LDVDECAVGSDCSEHAS 1760
Score = 36.2 bits (82), Expect = 0.037
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 38 LASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPA 97
+A C PP Y + AGSV+ + C EG++L K + G+W P+
Sbjct: 2079 IAHFCEKPPSVS---YSILESVSKAKFAAGSVVSFKCMEGFVLNTSAKIECMRGGQWNPS 2135
Query: 98 -MEISC 102
M I C
Sbjct: 2136 PMSIQC 2141
Score = 35.8 bits (81), Expect = 0.048
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C P PENG + T G+ + + C EGY L G K ++GEW
Sbjct: 1789 CKAPGNPENG------HSSGEIYTVGAEVTFSCQEGYQLMGVTKITCLESGEW 1835
Score = 34.3 bits (77), Expect = 0.14
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEIS 101
C PP +NG + GS +++ C EGY L GD + K+G+W
Sbjct: 2264 CGKPPPIQNGFMK------GENFEVGSKVQFFCNEGYELVGDSSWTCQKSGKWNKKSNPK 2317
Query: 102 C 102
C
Sbjct: 2318 C 2318
Score = 33.1 bits (74), Expect = 0.31
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPA 97
C PP NG + D T IEY C EG++L+G + NG W A
Sbjct: 2833 CSSPPVSANG------QVRGDEYTFQKEIEYTCNEGFLLEGARSRVCLANGSWSGA 2882
Score = 32.7 bits (73), Expect = 0.41
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 42 CPLPPEPENGGYICHPRPCRDPL--TAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C P PENG C + L T GS + Y C +GY L GD + N W
Sbjct: 1847 CGKPAIPENG--------CIEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSW 1893
Score = 32.7 bits (73), Expect = 0.41
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAM--- 98
C LP PENG + GS ++Y C G++L G L +N +W A
Sbjct: 2717 CDLPTAPENGFLRF------TETSMGSAVQYSCKPGHILAGSDLRLCLENRKWSGASPRC 2770
Query: 99 -EISCR 103
ISC+
Sbjct: 2771 EAISCK 2776
Score = 32.0 bits (71), Expect = 0.69
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 40 SVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYML---KGDYKYLTCKNGEWKP 96
S C +P P NG +IC P G C EGY D Y ++G WKP
Sbjct: 725 SPCEIPFTPVNGDFICTPD------NTGVNCTLTCLEGYDFTEGSTDKYYCAYEDGVWKP 778
Score = 32.0 bits (71), Expect = 0.69
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 67 GSVIEYLCAEGYMLKGDYKYLTCKNGEW--KPAMEISCR 103
G +I Y C GYML+G + + +NG W P CR
Sbjct: 3435 GDMITYSCYSGYMLEGFLRSVCLENGTWTSPPICRAVCR 3473
Score = 30.0 bits (66), Expect = 2.6
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 14/62 (22%)
Query: 54 ICHPRPCRDPLTAG------------SVIEYLCAEGYMLKGDYKYLTC-KNGEWKPAMEI 100
+C P C P + S ++ C EGY + D TC K+G W P I
Sbjct: 3116 VCEPLSCGSPPSVANAVATGEAHTYESEVKLRCLEGYTMDTDTDTFTCQKDGRWFPE-RI 3174
Query: 101 SC 102
SC
Sbjct: 3175 SC 3176
Score = 30.0 bits (66), Expect = 2.6
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 13/77 (16%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPL------------TAGSVIEYLCAEGYMLKGDYKYLT 88
VC + G IC C PL T G + Y C GY L+G +
Sbjct: 3280 VCQENRQWSGGVAICKETRCETPLEFLNGKADIENRTTGPNVVYSCNRGYSLEGPSEAHC 3339
Query: 89 CKNGEWKPAMEISCRLN 105
+NG W + + C+ N
Sbjct: 3340 TENGTWSHPVPL-CKPN 3355
Score = 28.9 bits (63), Expect = 5.9
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEI 100
C P PE+G + T S I Y C GY L+G+ + + +N +W + I
Sbjct: 3241 CGKPESPEHGFVV------GSKYTFESTIIYQCEPGYELEGNRERVCQENRQWSGGVAI 3293
Score = 28.5 bits (62), Expect = 7.7
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 38 LASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
LA C PP + H P G + Y C++GY L + + L G+W P
Sbjct: 2017 LAVSCDEPP------IVDHASPETAHRLFGDIAFYYCSDGYSLADNSQLLCNAQGKWVP 2069
>gi|62739186 complement factor H isoform a precursor [Homo sapiens]
Length = 1231
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C PP +NG P P S +EY C Y L+G+ K +TC+NG+W
Sbjct: 1109 CGPPPPIDNGDITSFPLSVYAP---ASSVEYQCQNLYQLEGN-KRITCRNGQW 1157
Score = 35.8 bits (81), Expect = 0.048
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 15/55 (27%)
Query: 55 CHPRPCRDP---------LTAGSVIEY------LCAEGYMLKGDYKYLTCKNGEW 94
C RPC P LT G+V EY C EGY L G+ Y C W
Sbjct: 80 CQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGW 134
Score = 32.0 bits (71), Expect = 0.69
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 48 PENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW---KP-AMEISCR 103
PENG + G + ++C GY ++GD + +G W KP +EISC+
Sbjct: 152 PENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCK 211
Score = 31.6 bits (70), Expect = 0.91
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C PPE NG ++ V+EY C +++KG K + C +GEW
Sbjct: 630 CGPPPELLNGNV---KEKTKEEYGHSEVVEYYCNPRFLMKGPNK-IQCVDGEW 678
>gi|118442839 complement factor H-related 1 [Homo sapiens]
Length = 330
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C PP +NG P P S +EY C Y L+G+ K +TC+NG+W
Sbjct: 208 CGPPPPIDNGDITSFPLSVYAP---ASSVEYQCQNLYQLEGN-KRITCRNGQW 256
>gi|239758115 PREDICTED: similar to complement factor H-related 1
isoform 2 [Homo sapiens]
Length = 271
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C PP +NG P P S +EY C Y L+G+ K +TC+NG+W
Sbjct: 149 CGPPPPIDNGDITSFPLSVYAP---ASSVEYQCQNLYQLEGN-KRITCRNGQW 197
>gi|239758113 PREDICTED: similar to complement factor H-related 1
isoform 1 [Homo sapiens]
Length = 330
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
C PP +NG P P S +EY C Y L+G+ K +TC+NG+W
Sbjct: 208 CGPPPPIDNGDITSFPLSVYAP---ASSVEYQCQNLYQLEGN-KRITCRNGQW 256
>gi|62739188 complement factor H isoform b precursor [Homo sapiens]
Length = 449
Score = 35.8 bits (81), Expect = 0.048
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 15/55 (27%)
Query: 55 CHPRPCRDP---------LTAGSVIEY------LCAEGYMLKGDYKYLTCKNGEW 94
C RPC P LT G+V EY C EGY L G+ Y C W
Sbjct: 80 CQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGW 134
Score = 32.0 bits (71), Expect = 0.69
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 48 PENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW---KP-AMEISCR 103
PENG + G + ++C GY ++GD + +G W KP +EISC+
Sbjct: 152 PENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCK 211
>gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo
sapiens]
Length = 3667
Score = 35.8 bits (81), Expect = 0.048
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 39 ASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCK 90
+++CP P EPENG I + GS +++ C E Y+L+G K +TC+
Sbjct: 443 SNLCPDPGEPENGKRI------GSDFSLGSTVQFSCDEDYVLQG-AKSITCQ 487
Score = 31.6 bits (70), Expect = 0.91
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNG 92
CP P P +G I D G V+ + C +GY L+G + ++TC G
Sbjct: 2012 CPEPQTPSSGIKI------GDRYMVGDVVSFQCDQGYSLQG-HSHITCMPG 2055
Score = 28.9 bits (63), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 67 GSVIEYLCAEGYMLKGDYKYLTCKNGE 93
GS + Y C GY+L+G Y LTC G+
Sbjct: 1680 GSTVTYYCDAGYVLQG-YSTLTCIMGD 1705
Score = 28.5 bits (62), Expect = 7.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 65 TAGSVIEYLCAEGYMLKGDYKYLTCKNGEW-KPAME 99
T G+V+ Y C GY L G + NG+W KP E
Sbjct: 2914 TYGTVVFYDCNPGYFLFGSSVLICQPNGQWDKPLPE 2949
Score = 28.5 bits (62), Expect = 7.7
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 60 CRDPLTAG------------SVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNED 107
C DP T G S + Y C GY+L G + NG W + C+ +
Sbjct: 3016 CGDPGTPGHGSRQESNFRTKSTVRYACDTGYILHGSEERTCLANGSW-TGRQPECKAVQC 3074
Query: 108 KDTHTSLGVPTLSIVASTASSVALILLLVVLFVLLQPKLK 147
+ T+ I +T SS ++I + ++L P ++
Sbjct: 3075 GNPGTTANGKVFRIDGTTFSS-SVIYSCMEGYILSGPSVR 3113
>gi|205277354 CUB and Sushi multiple domains 3 isoform 3 [Homo
sapiens]
Length = 3538
Score = 35.8 bits (81), Expect = 0.048
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 39 ASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCK 90
+++CP P EPENG I + GS +++ C E Y+L+G K +TC+
Sbjct: 379 SNLCPDPGEPENGKRI------GSDFSLGSTVQFSCDEDYVLQG-AKSITCQ 423
Score = 31.6 bits (70), Expect = 0.91
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNG 92
CP P P +G I D G V+ + C +GY L+G + ++TC G
Sbjct: 1948 CPEPQTPSSGIKI------GDRYMVGDVVSFQCDQGYSLQG-HSHITCMPG 1991
Score = 28.9 bits (63), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 67 GSVIEYLCAEGYMLKGDYKYLTCKNGE 93
GS + Y C GY+L+G Y LTC G+
Sbjct: 1616 GSTVTYYCDAGYVLQG-YSTLTCIMGD 1641
Score = 28.5 bits (62), Expect = 7.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 65 TAGSVIEYLCAEGYMLKGDYKYLTCKNGEW-KPAME 99
T G+V+ Y C GY L G + NG+W KP E
Sbjct: 2785 TYGTVVFYDCNPGYFLFGSSVLICQPNGQWDKPLPE 2820
Score = 28.5 bits (62), Expect = 7.7
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 60 CRDPLTAG------------SVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNED 107
C DP T G S + Y C GY+L G + NG W + C+ +
Sbjct: 2887 CGDPGTPGHGSRQESNFRTKSTVRYACDTGYILHGSEERTCLANGSW-TGRQPECKAVQC 2945
Query: 108 KDTHTSLGVPTLSIVASTASSVALILLLVVLFVLLQPKLK 147
+ T+ I +T SS ++I + ++L P ++
Sbjct: 2946 GNPGTTANGKVFRIDGTTFSS-SVIYSCMEGYILSGPSVR 2984
>gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo
sapiens]
Length = 3707
Score = 35.8 bits (81), Expect = 0.048
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 39 ASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCK 90
+++CP P EPENG I + GS +++ C E Y+L+G K +TC+
Sbjct: 483 SNLCPDPGEPENGKRI------GSDFSLGSTVQFSCDEDYVLQG-AKSITCQ 527
Score = 31.6 bits (70), Expect = 0.91
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNG 92
CP P P +G I D G V+ + C +GY L+G + ++TC G
Sbjct: 2052 CPEPQTPSSGIKI------GDRYMVGDVVSFQCDQGYSLQG-HSHITCMPG 2095
Score = 28.9 bits (63), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 67 GSVIEYLCAEGYMLKGDYKYLTCKNGE 93
GS + Y C GY+L+G Y LTC G+
Sbjct: 1720 GSTVTYYCDAGYVLQG-YSTLTCIMGD 1745
Score = 28.5 bits (62), Expect = 7.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 65 TAGSVIEYLCAEGYMLKGDYKYLTCKNGEW-KPAME 99
T G+V+ Y C GY L G + NG+W KP E
Sbjct: 2954 TYGTVVFYDCNPGYFLFGSSVLICQPNGQWDKPLPE 2989
Score = 28.5 bits (62), Expect = 7.7
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 60 CRDPLTAG------------SVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNED 107
C DP T G S + Y C GY+L G + NG W + C+ +
Sbjct: 3056 CGDPGTPGHGSRQESNFRTKSTVRYACDTGYILHGSEERTCLANGSW-TGRQPECKAVQC 3114
Query: 108 KDTHTSLGVPTLSIVASTASSVALILLLVVLFVLLQPKLK 147
+ T+ I +T SS ++I + ++L P ++
Sbjct: 3115 GNPGTTANGKVFRIDGTTFSS-SVIYSCMEGYILSGPSVR 3153
>gi|5031695 H factor (complement)-like 3 [Homo sapiens]
Length = 270
Score = 35.8 bits (81), Expect = 0.048
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 39 ASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW 94
A C PP +NG P GS +EY C Y L+G+ +TC+NG+W
Sbjct: 146 AEKCGPPPPIDNGDITSFLLSVYAP---GSSVEYQCQNLYQLEGN-NQITCRNGQW 197
>gi|86793109 complement receptor 1 isoform S precursor [Homo sapiens]
Length = 2489
Score = 35.4 bits (80), Expect = 0.063
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 20 GHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYM 79
G+GV+ C L + + CP PP+ +NG YI P G I Y+C GY+
Sbjct: 2279 GNGVWSSPAPRCEL---SVPAACPHPPKIQNGHYIGGHVSLYLP---GMTISYICDPGYL 2332
Query: 80 LKGDYKYLTCKNGEWKP----AMEISC 102
L G G W E++C
Sbjct: 2333 LVGKGFIFCTDQGIWSQLDHYCKEVNC 2359
Score = 32.3 bits (72), Expect = 0.53
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
VC PPE +G H +D + G + Y C GY L+G G+W P
Sbjct: 1646 VCQPPPEILHGE---HTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSP 1698
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Query: 46 PEPENGGYICHPRPC----------RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK 95
PE + +C P P +D + G + Y C GY L+G G+W
Sbjct: 288 PELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWS 347
Query: 96 PA 97
PA
Sbjct: 348 PA 349
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Query: 46 PEPENGGYICHPRPC----------RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK 95
PE + +C P P +D + G + Y C GY L+G G+W
Sbjct: 738 PELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWS 797
Query: 96 PA 97
PA
Sbjct: 798 PA 799
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Query: 46 PEPENGGYICHPRPC----------RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK 95
PE + +C P P +D + G + Y C GY L+G G+W
Sbjct: 1188 PELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWS 1247
Query: 96 PA 97
PA
Sbjct: 1248 PA 1249
Score = 30.0 bits (66), Expect = 2.6
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
VC PPE +G H +D + G + Y C Y L+G G+W P
Sbjct: 2099 VCQPPPEILHGE---HTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCTPQGDWSP 2151
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 240 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 296
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 690 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 746
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 1140 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 1196
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 1590 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 1646
>gi|86793036 complement receptor 1 isoform F precursor [Homo sapiens]
Length = 2039
Score = 35.4 bits (80), Expect = 0.063
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 20 GHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYM 79
G+GV+ C L + + CP PP+ +NG YI P G I Y+C GY+
Sbjct: 1829 GNGVWSSPAPRCEL---SVPAACPHPPKIQNGHYIGGHVSLYLP---GMTISYICDPGYL 1882
Query: 80 LKGDYKYLTCKNGEWKP----AMEISC 102
L G G W E++C
Sbjct: 1883 LVGKGFIFCTDQGIWSQLDHYCKEVNC 1909
Score = 32.3 bits (72), Expect = 0.53
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
VC PPE +G H +D + G + Y C GY L+G G+W P
Sbjct: 1196 VCQPPPEILHGE---HTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSP 1248
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Query: 46 PEPENGGYICHPRPC----------RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK 95
PE + +C P P +D + G + Y C GY L+G G+W
Sbjct: 288 PELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWS 347
Query: 96 PA 97
PA
Sbjct: 348 PA 349
Score = 30.8 bits (68), Expect = 1.5
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 10/62 (16%)
Query: 46 PEPENGGYICHPRPC----------RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK 95
PE + +C P P +D + G + Y C GY L+G G+W
Sbjct: 738 PELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWS 797
Query: 96 PA 97
PA
Sbjct: 798 PA 799
Score = 30.0 bits (66), Expect = 2.6
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 41 VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
VC PPE +G H +D + G + Y C Y L+G G+W P
Sbjct: 1649 VCQPPPEILHGE---HTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCTPQGDWSP 1701
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 240 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 296
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 690 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 746
Score = 29.6 bits (65), Expect = 3.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 PPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRL 104
PP ENG + R + V+E+ C G+++KG + +W+P + R+
Sbjct: 1140 PPNVENGILVSDNRSL---FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRV 1196
>gi|42544177 complement component (3d/Epstein Barr virus) receptor 2
isoform 2 [Homo sapiens]
Length = 1033
Score = 35.4 bits (80), Expect = 0.063
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW-KPA--- 97
CP PP+ NG H + G I Y C +GY+L G+ L G W +PA
Sbjct: 851 CPPPPKTPNGN---HTGGNIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 907
Query: 98 MEISCRLNEDKD 109
E++C D D
Sbjct: 908 KEVNCSSPADMD 919
Score = 29.6 bits (65), Expect = 3.4
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 67 GSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLSIVASTA 126
G+V+ C +GYML+G + + +W P + + CR SL I A
Sbjct: 934 GAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAV-CR-------SRSLAPVLCGIAAGLI 985
Query: 127 SSVALILLLVVLFVLLQPKLKSFH 150
+ L+++ L+V+ + + ++++
Sbjct: 986 --LLTFLIVITLYVISKHRARNYY 1007
Score = 29.3 bits (64), Expect = 4.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
C PP NG DP G+ I+Y C GY+L G+ G W P
Sbjct: 410 CQAPPNILNGQKEDRHMVRFDP---GTSIKYSCNPGYVLVGEESIQCTSEGVWTP 461
>gi|54792123 complement component (3d/Epstein Barr virus) receptor 2
isoform 1 [Homo sapiens]
Length = 1092
Score = 35.4 bits (80), Expect = 0.063
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEW-KPA--- 97
CP PP+ NG H + G I Y C +GY+L G+ L G W +PA
Sbjct: 910 CPPPPKTPNGN---HTGGNIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 966
Query: 98 MEISCRLNEDKD 109
E++C D D
Sbjct: 967 KEVNCSSPADMD 978
Score = 29.6 bits (65), Expect = 3.4
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 67 GSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLSIVASTA 126
G+V+ C +GYML+G + + +W P + + CR SL I A
Sbjct: 993 GAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAV-CR-------SRSLAPVLCGIAAGLI 1044
Query: 127 SSVALILLLVVLFVLLQPKLKSFH 150
+ L+++ L+V+ + + ++++
Sbjct: 1045 --LLTFLIVITLYVISKHRARNYY 1066
Score = 29.3 bits (64), Expect = 4.5
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
C PP NG DP G+ I+Y C GY+L G+ G W P
Sbjct: 410 CQAPPNILNGQKEDRHMVRFDP---GTSIKYSCNPGYVLVGEESIQCTSEGVWTP 461
Score = 29.3 bits (64), Expect = 4.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 66 AGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPA 97
+G ++Y C GY+L G+ +G W P+
Sbjct: 682 SGMTVDYTCDPGYLLVGNKSIHCMPSGNWSPS 713
>gi|134254450 patched isoform S [Homo sapiens]
Length = 1296
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1085 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1143
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1144 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1195
>gi|134254435 patched isoform S [Homo sapiens]
Length = 1296
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1085 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1143
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1144 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1195
>gi|134254468 patched isoform S [Homo sapiens]
Length = 1296
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1085 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1143
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1144 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1195
>gi|134254452 patched isoform S [Homo sapiens]
Length = 1296
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1085 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1143
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1144 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1195
>gi|134254432 patched isoform L' [Homo sapiens]
Length = 1446
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1235 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1293
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1294 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1345
>gi|134254466 patched isoform M [Homo sapiens]
Length = 1381
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1170 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1228
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1229 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1280
>gi|134254446 patched isoform L [Homo sapiens]
Length = 1447
Score = 35.4 bits (80), Expect = 0.063
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 147 KSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGP 206
+ H QG G ++V+ + + ++ V+ S H PP++PR Q L GS P
Sbjct: 1236 EELRHYEAQQGAGGPAHQVIVEATENPVFAHSTVVHPESRHH-PPSNPRQQPHLDSGSLP 1294
Query: 207 SG-------RSVPREQQLPDQGACSSAGGEDEAPGQSGLCE--AWGSRASET 249
G R PRE P E G SG WG R + +
Sbjct: 1295 PGRQGQQPRRDPPREGLWPPPYRPRRDAFEISTEGHSGPSNRARWGPRGARS 1346
>gi|5454086 sushi-repeat-containing protein, X-linked [Homo sapiens]
Length = 464
Score = 35.4 bits (80), Expect = 0.063
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEIS 101
CP P NGG+ C D S EY C+ GY LKG+ + +TC + + S
Sbjct: 120 CPTLAMPANGGF-----KCVDGAYFNSRCEYYCSPGYTLKGE-RTVTCMDNKAWSGRPAS 173
Query: 102 C 102
C
Sbjct: 174 C 174
>gi|56117838 secreted frizzled-related protein 1 [Homo sapiens]
Length = 314
Score = 35.0 bits (79), Expect = 0.082
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 22 GVFLPLVILCTLLGDGLASVCPLPPEPEN-----GGYICHPRPCRDPLTAGSVIEYLCAE 76
G + P ++ C +G + PP G +C P C + L + ++IE+LCA
Sbjct: 148 GFYWPEMLKCDKFPEGDVCIAMTPPNATEASKPQGTTVCPP--CDNELKSEAIIEHLCAS 205
Query: 77 GYMLKGDYKYLTCKNGEWK 95
+ L+ K + +NG+ K
Sbjct: 206 EFALRMKIKEVKKENGDKK 224
>gi|110611237 coagulation factor XIII B subunit precursor [Homo
sapiens]
Length = 661
Score = 35.0 bits (79), Expect = 0.082
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEIS 101
C PP ENG H + + G + Y C GY+L G + +TC G+W +
Sbjct: 336 CEEPPFIENGAANLHSKIYYN----GDKVTYACKSGYLLHGSNE-ITCNRGKW--TLPPE 388
Query: 102 CRLNEDKDTHTSL---GVPTLSIVAS--TASSV 129
C N + H + G I+AS T SSV
Sbjct: 389 CVENNENCKHPPVVMNGAVADGILASYATGSSV 421
Score = 33.9 bits (76), Expect = 0.18
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 44 LPPE-PENGGYICHPRPCRDPLTA---------GSVIEYLCAEGYMLKGDYKYLTCKNGE 93
LPPE EN HP + A GS +EY C E Y+L+G K C+ G+
Sbjct: 385 LPPECVENNENCKHPPVVMNGAVADGILASYATGSSVEYRCNEYYLLRGS-KISRCEQGK 443
Query: 94 WK--PAMEISCRLNED 107
W P C +N D
Sbjct: 444 WSSPPVCLEPCTVNVD 459
Score = 28.9 bits (63), Expect = 5.9
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 49 ENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKP 96
ENG + P + G V+++ C E Y L G + C N W P
Sbjct: 220 ENGYF----HPVKQTYEEGDVVQFFCHENYYLSGS-DLIQCYNFGWYP 262
>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform b
[Homo sapiens]
Length = 1173
Score = 34.3 bits (77), Expect = 0.14
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 156 QGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPP----ADPRVQIVLSEGSGPSGRSV 211
+G+ G +VS++ GV P Y E + P A V I L + R
Sbjct: 985 EGLEGPRVSMLPSGVG---PEYAERPEVARRDSAPTENRLAKSDVPIQLLSATNQFQRQA 1041
Query: 212 PREQQLPDQGACSSAGGEDEAPGQSGLCEAWGSRAS 247
+QQ+P + A S+ GG+D+ G+S + W S AS
Sbjct: 1042 AVQQQIPTKLAASTKGGKDKG-GKSRGSQRWESSAS 1076
>gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isoform a
[Homo sapiens]
Length = 1015
Score = 34.3 bits (77), Expect = 0.14
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 156 QGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPP----ADPRVQIVLSEGSGPSGRSV 211
+G+ G +VS++ GV P Y E + P A V I L + R
Sbjct: 827 EGLEGPRVSMLPSGVG---PEYAERPEVARRDSAPTENRLAKSDVPIQLLSATNQFQRQA 883
Query: 212 PREQQLPDQGACSSAGGEDEAPGQSGLCEAWGSRAS 247
+QQ+P + A S+ GG+D+ G+S + W S AS
Sbjct: 884 AVQQQIPTKLAASTKGGKDKG-GKSRGSQRWESSAS 918
>gi|153266841 apolipoprotein H precursor [Homo sapiens]
Length = 345
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWK--PAME 99
CP P P+N G++ + P + L + C +GY L G + K G W P+ +
Sbjct: 205 CPFPSRPDN-GFVNY--PAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPSCK 261
Query: 100 ISCRLNEDKDT 110
SC++ K T
Sbjct: 262 ASCKVPVKKAT 272
>gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens]
Length = 3487
Score = 34.3 bits (77), Expect = 0.14
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 16/65 (24%)
Query: 55 CHPRPCRDPLTA-------------GSVIEYLCAEGYMLKGDYKYLTCK-NGEW--KPAM 98
C P CR P T G + Y C EG+ LKG ++ TCK +G W KP +
Sbjct: 3185 CVPHHCRQPETPTHANVGALDLPSMGYTLIYSCQEGFSLKGGSEHRTCKADGSWTGKPPI 3244
Query: 99 EISCR 103
+ R
Sbjct: 3245 CLEVR 3249
Score = 30.0 bits (66), Expect = 2.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 40 SVCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTC 89
++CP P PE G + GS +++ C EGY L+G K +TC
Sbjct: 341 NMCPDPGIPERG------KRLGSDFRLGSSVQFTCNEGYDLQGS-KRITC 383
Score = 29.6 bits (65), Expect = 3.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 42 CPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTC 89
CP P P NG + D L GS I +LC EG++ + +TC
Sbjct: 691 CPDPGVPVNG------KRFGDSLQLGSSISFLCDEGFLGTQGSETITC 732
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,268,716
Number of Sequences: 37866
Number of extensions: 673971
Number of successful extensions: 2022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1807
Number of HSP's gapped (non-prelim): 278
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.