Guide to the Human Genome
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Name: KIAA0247 Sequence: fasta or formatted (303aa) NCBI GI: 7662020
Description:

hypothetical protein LOC9766

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         23           1
 C cysteine            3.6         11           1
 D aspartate           5.0         15           2
 E glutamate           6.6         20           2
 F phenylalanine       1.3          4           1
 G glycine             9.2         28           2
 H histidine           3.0          9           2
 I isoleucine          3.6         11           1
 K lysine              3.3         10           1
 L leucine            10.6         32           3
 M methionine          1.7          5           1
 N asparagine          1.7          5           1
 P proline             6.9         21           2
 Q glutamine           4.0         12           2
 R arginine            3.6         11           2
 S serine             11.6         35           2
 T threonine           4.6         14           2
 V valine              8.6         26           2
 W tryptophan          1.0          3           1
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9766 
SUSD4                 0.181   sushi domain containing 4 isoform a 
SVEP1                 0.025   polydom 
CFH                   0.022   complement factor H isoform a precursor 
CFHR1                 0.022   complement factor H-related 1 
LOC100293069          0.022   PREDICTED: similar to complement factor H-related 1...
LOC100293069          0.022   PREDICTED: similar to complement factor H-related 1...
CFH                   0.019   complement factor H isoform b precursor 
CSMD3                 0.019   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.019   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.019   CUB and Sushi multiple domains 3 isoform 1 
CFHR2                 0.019   H factor (complement)-like 3 
CR1                   0.017   complement receptor 1 isoform S precursor 
CR1                   0.017   complement receptor 1 isoform F precursor 
CR2                   0.017   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.017   complement component (3d/Epstein Barr virus) recepto...
PTCH1                 0.017   patched isoform S 
PTCH1                 0.017   patched isoform S 
PTCH1                 0.017   patched isoform S 
PTCH1                 0.017   patched isoform S 
PTCH1                 0.017   patched isoform L' 
PTCH1                 0.017   patched isoform M 
PTCH1                 0.017   patched isoform L 
SRPX                  0.017   sushi-repeat-containing protein, X-linked 
SFRP1                 0.017   secreted frizzled-related protein 1 
F13B                  0.017   coagulation factor XIII B subunit precursor 
ARHGEF18              0.015   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.015   Rho/Rac guanine nucleotide exchange factor 18 isofor...
APOH                  0.015   apolipoprotein H precursor 
CSMD2                 0.015   CUB and Sushi multiple domains 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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